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Q6ZPG8 (Q6ZPG8_MOUSE) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 51. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
MKIAA1869 protein EMBL BAC98269.1
Gene names
Name:Sema6c MGI 1338032
Synonyms:mKIAA1869 EMBL BAC98269.1
OrganismMus musculus (Mouse) EMBL BAC98269.1
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Mus › Mus

Protein attributes

Sequence length774 AA.
Sequence statusFragment.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence similarities

Contains 1 Sema domain. SAAS SAAS002165

Ontologies

Keywords
   Cellular componentMembrane
   DomainTransmembrane
Transmembrane helix SAAS SAAS003659
   PTMDisulfide bond SAAS SAAS002165
Gene Ontology (GO)
   Biological_processaxon guidance

Inferred from electronic annotation. Source: Compara

   Cellular_componentintegral to membrane

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionreceptor activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL BAC98269.1

Sequences

Sequence LengthMass (Da)Tools
Q6ZPG8 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: A930A85A9EEFC00A

FASTA77482,108
        10         20         30         40         50         60 
QQEGEELSGQ ARCPFDATQS TVAIFAEGSL YSATAADFQA SDAVVYRSLG PQPPLRSAKY 

        70         80         90        100        110        120 
DSKWLREPHF VYALEHGEHV YFFFREVSVE DARLGRVQFS RVARVCKRDM GGSPRALDRH 

       130        140        150        160        170        180 
WTSFLKLRLN CSVPGDSTFY FDVLQSLTGP VNLHGRSALF GVFTTQTNSI PGSAVCAFYL 

       190        200        210        220        230        240 
DDIERGFEGK FKEQRSLDGA WTPVSEDKVP SPRPGSCAGV GAAASFSSSQ DLPDDVLLFI 

       250        260        270        280        290        300 
KAHPLLDPAV PPATHQPLLT LTSRALLTQV AVDGMAGPHR NTTVLFLGSN DGTVLKVLPP 

       310        320        330        340        350        360 
GGQSLGSEPI VLEEIDAYSH ARCSGKRSPR AARRIIGLEL DTEGHRLFVA FPGCIVYLSL 

       370        380        390        400        410        420 
SRCARHGACQ RSCLASLDPY CGWHRSRGCM SIRGPGGTDV DLTGNQESTE HGDCQDGATG 

       430        440        450        460        470        480 
SQSGPGDSAY GVRRDLSPAS ASRSIPIPLL LACVAAAFAL GASVSGLLVS CACRRANRRR 

       490        500        510        520        530        540 
SKDIETPGLP RPLSLRSLAR LHGGGPEPPP PPKDGDAAQT PQLYTTFLPP PDGGSPPELA 

       550        560        570        580        590        600 
CLPTPETTPE LPVKHLRASG GPWEWNQNGN NASEGPGRPP RGCSGAGGPA PRVLVRPPPP 

       610        620        630        640        650        660 
GCPGQAVEVT TLEELLRYLH GPQPPRKGSE PLASAPFTSR PPASEPGASL FVDSSPMPRD 

       670        680        690        700        710        720 
GVPPLRLDVP PEGKRAAPSG RPALSAPAPR LGVGGSRRLP FPTHRAPPGL LTRVPSGGPA 

       730        740        750        760        770 
RYSGGPGRHL LYLGRPEGHR GRSLKRVDVK SPLSPKPPLA SPPQPAPHGG HFNF

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References

[1]"Prediction of the coding sequences of mouse homologues of KIAA gene: III. The complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries."
Okazaki N., Kikuno R., Ohara R., Inamoto S., Koseki H., Hiraoka S., Saga Y., Nagase T., Ohara O., Koga H.
DNA Res. 10:167-180(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Embryonic tail EMBL BAC98269.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AK129459 mRNA. Translation: BAC98269.1.
IPIIPI00974752.
UniGeneMm.23662.

3D structure databases

ProteinModelPortalQ6ZPG8.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ6ZPG8.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Organism-specific databases

MGIMGI:1338032. Sema6c.

Phylogenomic databases

HOVERGENHBG072910.

Gene expression databases

ArrayExpressQ6ZPG8.
BgeeQ6ZPG8.
GenevestigatorQ6ZPG8.

Family and domain databases

Gene3D2.130.10.10. 1 hit.
InterProIPR003659. Plexin-like.
IPR016201. Plexin-like_fold.
IPR002165. Plexin_repeat.
IPR027231. Semaphorin.
IPR001627. Semaphorin/CD100_Ag.
IPR015514. Semaphorin_6C.
IPR015943. WD40/YVTN_repeat-like_dom.
[Graphical view]
PANTHERPTHR11036. PTHR11036. 1 hit.
PTHR11036:SF9. PTHR11036:SF9. 1 hit.
PfamPF01437. PSI. 1 hit.
PF01403. Sema. 1 hit.
[Graphical view]
SMARTSM00423. PSI. 1 hit.
SM00630. Sema. 1 hit.
[Graphical view]
SUPFAMSSF103575. Plexin-like_fold. 1 hit.
SSF101912. Sema. 1 hit.
PROSITEPS51004. SEMA. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

SOURCESearch...

Entry information

Entry nameQ6ZPG8_MOUSE
AccessionPrimary (citable) accession number: Q6ZPG8
Entry history
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: April 3, 2013
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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