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Protein
Submitted name:

MKIAA1869 protein

Gene

Sema6c

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Submitted name:
MKIAA1869 proteinImported
Gene namesi
Name:Sema6cImported
Synonyms:mKIAA1869Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:1338032. Sema6c.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei449 – 473HelicalSequence analysisAdd BLAST25

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

PaxDbiQ6ZPG8.

Structurei

3D structure databases

ProteinModelPortaliQ6ZPG8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 360SemaInterPro annotationAdd BLAST360

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG3611. Eukaryota.
ENOG410XQZC. LUCA.
HOVERGENiHBG072910.

Family and domain databases

Gene3Di2.130.10.10. 1 hit.
InterProiView protein in InterPro
IPR001627. Semap_dom.
IPR027231. Semaphorin.
IPR015514. Semaphorin_6C.
IPR015943. WD40/YVTN_repeat-like_dom.
PANTHERiPTHR11036. PTHR11036. 1 hit.
PTHR11036:SF121. PTHR11036:SF121. 1 hit.
PfamiView protein in Pfam
PF01403. Sema. 1 hit.
SMARTiView protein in SMART
SM00630. Sema. 1 hit.
SUPFAMiSSF101912. SSF101912. 1 hit.
PROSITEiView protein in PROSITE
PS51004. SEMA. 1 hit.

Sequencei

Sequence statusi: Fragment.

Q6ZPG8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
QQEGEELSGQ ARCPFDATQS TVAIFAEGSL YSATAADFQA SDAVVYRSLG
60 70 80 90 100
PQPPLRSAKY DSKWLREPHF VYALEHGEHV YFFFREVSVE DARLGRVQFS
110 120 130 140 150
RVARVCKRDM GGSPRALDRH WTSFLKLRLN CSVPGDSTFY FDVLQSLTGP
160 170 180 190 200
VNLHGRSALF GVFTTQTNSI PGSAVCAFYL DDIERGFEGK FKEQRSLDGA
210 220 230 240 250
WTPVSEDKVP SPRPGSCAGV GAAASFSSSQ DLPDDVLLFI KAHPLLDPAV
260 270 280 290 300
PPATHQPLLT LTSRALLTQV AVDGMAGPHR NTTVLFLGSN DGTVLKVLPP
310 320 330 340 350
GGQSLGSEPI VLEEIDAYSH ARCSGKRSPR AARRIIGLEL DTEGHRLFVA
360 370 380 390 400
FPGCIVYLSL SRCARHGACQ RSCLASLDPY CGWHRSRGCM SIRGPGGTDV
410 420 430 440 450
DLTGNQESTE HGDCQDGATG SQSGPGDSAY GVRRDLSPAS ASRSIPIPLL
460 470 480 490 500
LACVAAAFAL GASVSGLLVS CACRRANRRR SKDIETPGLP RPLSLRSLAR
510 520 530 540 550
LHGGGPEPPP PPKDGDAAQT PQLYTTFLPP PDGGSPPELA CLPTPETTPE
560 570 580 590 600
LPVKHLRASG GPWEWNQNGN NASEGPGRPP RGCSGAGGPA PRVLVRPPPP
610 620 630 640 650
GCPGQAVEVT TLEELLRYLH GPQPPRKGSE PLASAPFTSR PPASEPGASL
660 670 680 690 700
FVDSSPMPRD GVPPLRLDVP PEGKRAAPSG RPALSAPAPR LGVGGSRRLP
710 720 730 740 750
FPTHRAPPGL LTRVPSGGPA RYSGGPGRHL LYLGRPEGHR GRSLKRVDVK
760 770
SPLSPKPPLA SPPQPAPHGG HFNF
Length:774
Mass (Da):82,108
Last modified:July 5, 2004 - v1
Checksum:iA930A85A9EEFC00A
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK129459 mRNA. Translation: BAC98269.1.
UniGeneiMm.23662.

Similar proteinsi

Entry informationi

Entry nameiQ6ZPG8_MOUSE
AccessioniPrimary (citable) accession number: Q6ZPG8
Entry historyiIntegrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: August 30, 2017
This is version 81 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

Lacks conserved residue(s) required for the propagation of feature annotation.PROSITE-ProRule annotation