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Protein
Submitted name:

MKIAA1869 protein

Gene

Sema6c

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  • semaphorin receptor binding Source: MGI
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
MKIAA1869 proteinImported
Gene namesi
Name:Sema6cImported
Synonyms:mKIAA1869Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:1338032. Sema6c.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Keywords - PTMi

Disulfide bondSAAS annotation

Expressioni

Gene expression databases

BgeeiQ6ZPG8.
ExpressionAtlasiQ6ZPG8. baseline and differential.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000088331.

Structurei

3D structure databases

ProteinModelPortaliQ6ZPG8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Contains Sema domain.SAAS annotation

Phylogenomic databases

HOVERGENiHBG072910.

Family and domain databases

Gene3Di2.130.10.10. 1 hit.
InterProiIPR016201. Plexin-like_fold.
IPR002165. Plexin_repeat.
IPR001627. Semap_dom.
IPR027231. Semaphorin.
IPR015514. Semaphorin_6C.
IPR015943. WD40/YVTN_repeat-like_dom.
[Graphical view]
PANTHERiPTHR11036. PTHR11036. 1 hit.
PTHR11036:SF11. PTHR11036:SF11. 1 hit.
PfamiPF01437. PSI. 1 hit.
PF01403. Sema. 1 hit.
[Graphical view]
SMARTiSM00423. PSI. 1 hit.
SM00630. Sema. 1 hit.
[Graphical view]
SUPFAMiSSF101912. SSF101912. 1 hit.
SSF103575. SSF103575. 1 hit.
PROSITEiPS51004. SEMA. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

Q6ZPG8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
QQEGEELSGQ ARCPFDATQS TVAIFAEGSL YSATAADFQA SDAVVYRSLG
60 70 80 90 100
PQPPLRSAKY DSKWLREPHF VYALEHGEHV YFFFREVSVE DARLGRVQFS
110 120 130 140 150
RVARVCKRDM GGSPRALDRH WTSFLKLRLN CSVPGDSTFY FDVLQSLTGP
160 170 180 190 200
VNLHGRSALF GVFTTQTNSI PGSAVCAFYL DDIERGFEGK FKEQRSLDGA
210 220 230 240 250
WTPVSEDKVP SPRPGSCAGV GAAASFSSSQ DLPDDVLLFI KAHPLLDPAV
260 270 280 290 300
PPATHQPLLT LTSRALLTQV AVDGMAGPHR NTTVLFLGSN DGTVLKVLPP
310 320 330 340 350
GGQSLGSEPI VLEEIDAYSH ARCSGKRSPR AARRIIGLEL DTEGHRLFVA
360 370 380 390 400
FPGCIVYLSL SRCARHGACQ RSCLASLDPY CGWHRSRGCM SIRGPGGTDV
410 420 430 440 450
DLTGNQESTE HGDCQDGATG SQSGPGDSAY GVRRDLSPAS ASRSIPIPLL
460 470 480 490 500
LACVAAAFAL GASVSGLLVS CACRRANRRR SKDIETPGLP RPLSLRSLAR
510 520 530 540 550
LHGGGPEPPP PPKDGDAAQT PQLYTTFLPP PDGGSPPELA CLPTPETTPE
560 570 580 590 600
LPVKHLRASG GPWEWNQNGN NASEGPGRPP RGCSGAGGPA PRVLVRPPPP
610 620 630 640 650
GCPGQAVEVT TLEELLRYLH GPQPPRKGSE PLASAPFTSR PPASEPGASL
660 670 680 690 700
FVDSSPMPRD GVPPLRLDVP PEGKRAAPSG RPALSAPAPR LGVGGSRRLP
710 720 730 740 750
FPTHRAPPGL LTRVPSGGPA RYSGGPGRHL LYLGRPEGHR GRSLKRVDVK
760 770
SPLSPKPPLA SPPQPAPHGG HFNF
Length:774
Mass (Da):82,108
Last modified:July 5, 2004 - v1
Checksum:iA930A85A9EEFC00A
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK129459 mRNA. Translation: BAC98269.1.
UniGeneiMm.23662.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK129459 mRNA. Translation: BAC98269.1.
UniGeneiMm.23662.

3D structure databases

ProteinModelPortaliQ6ZPG8.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000088331.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Organism-specific databases

MGIiMGI:1338032. Sema6c.

Phylogenomic databases

HOVERGENiHBG072910.

Miscellaneous databases

SOURCEiSearch...

Gene expression databases

BgeeiQ6ZPG8.
ExpressionAtlasiQ6ZPG8. baseline and differential.

Family and domain databases

Gene3Di2.130.10.10. 1 hit.
InterProiIPR016201. Plexin-like_fold.
IPR002165. Plexin_repeat.
IPR001627. Semap_dom.
IPR027231. Semaphorin.
IPR015514. Semaphorin_6C.
IPR015943. WD40/YVTN_repeat-like_dom.
[Graphical view]
PANTHERiPTHR11036. PTHR11036. 1 hit.
PTHR11036:SF11. PTHR11036:SF11. 1 hit.
PfamiPF01437. PSI. 1 hit.
PF01403. Sema. 1 hit.
[Graphical view]
SMARTiSM00423. PSI. 1 hit.
SM00630. Sema. 1 hit.
[Graphical view]
SUPFAMiSSF101912. SSF101912. 1 hit.
SSF103575. SSF103575. 1 hit.
PROSITEiPS51004. SEMA. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Prediction of the coding sequences of mouse homologues of KIAA gene: III. The complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries."
    Okazaki N., Kikuno R., Ohara R., Inamoto S., Koseki H., Hiraoka S., Saga Y., Nagase T., Ohara O., Koga H.
    DNA Res. 10:167-180(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: Embryonic tailImported.

Entry informationi

Entry nameiQ6ZPG8_MOUSE
AccessioniPrimary (citable) accession number: Q6ZPG8
Entry historyi
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: June 24, 2015
This is version 67 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.