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Q6ZPG8

- Q6ZPG8_MOUSE

UniProt

Q6ZPG8 - Q6ZPG8_MOUSE

Protein
Submitted name:

MKIAA1869 protein

Gene

Sema6c

Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 63 (01 Oct 2014)
      Sequence version 1 (05 Jul 2004)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. receptor activity Source: InterPro
    2. semaphorin receptor binding Source: MGI

    GO - Biological processi

    1. axon guidance Source: Ensembl

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    MKIAA1869 proteinImported
    Gene namesi
    Name:Sema6cImported
    Synonyms:mKIAA1869Imported
    OrganismiMus musculus (Mouse)Imported
    Taxonomic identifieri10090 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

    Organism-specific databases

    MGIiMGI:1338032. Sema6c.

    Subcellular locationi

    GO - Cellular componenti

    1. membrane Source: InterPro

    PTM / Processingi

    Keywords - PTMi

    Disulfide bondSAAS annotation

    Expressioni

    Gene expression databases

    ArrayExpressiQ6ZPG8.
    BgeeiQ6ZPG8.
    GenevestigatoriQ6ZPG8.

    Structurei

    3D structure databases

    ProteinModelPortaliQ6ZPG8.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Contains Sema domain.SAAS annotation

    Phylogenomic databases

    HOVERGENiHBG072910.

    Family and domain databases

    Gene3Di2.130.10.10. 1 hit.
    InterProiIPR016201. Plexin-like_fold.
    IPR002165. Plexin_repeat.
    IPR001627. Semap_dom.
    IPR027231. Semaphorin.
    IPR015514. Semaphorin_6C.
    IPR015943. WD40/YVTN_repeat-like_dom.
    [Graphical view]
    PANTHERiPTHR11036. PTHR11036. 1 hit.
    PTHR11036:SF11. PTHR11036:SF11. 1 hit.
    PfamiPF01437. PSI. 1 hit.
    PF01403. Sema. 1 hit.
    [Graphical view]
    SMARTiSM00423. PSI. 1 hit.
    SM00630. Sema. 1 hit.
    [Graphical view]
    SUPFAMiSSF101912. SSF101912. 1 hit.
    SSF103575. SSF103575. 1 hit.
    PROSITEiPS51004. SEMA. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Fragment.

    Q6ZPG8-1 [UniParc]FASTAAdd to Basket

    « Hide

    QQEGEELSGQ ARCPFDATQS TVAIFAEGSL YSATAADFQA SDAVVYRSLG    50
    PQPPLRSAKY DSKWLREPHF VYALEHGEHV YFFFREVSVE DARLGRVQFS 100
    RVARVCKRDM GGSPRALDRH WTSFLKLRLN CSVPGDSTFY FDVLQSLTGP 150
    VNLHGRSALF GVFTTQTNSI PGSAVCAFYL DDIERGFEGK FKEQRSLDGA 200
    WTPVSEDKVP SPRPGSCAGV GAAASFSSSQ DLPDDVLLFI KAHPLLDPAV 250
    PPATHQPLLT LTSRALLTQV AVDGMAGPHR NTTVLFLGSN DGTVLKVLPP 300
    GGQSLGSEPI VLEEIDAYSH ARCSGKRSPR AARRIIGLEL DTEGHRLFVA 350
    FPGCIVYLSL SRCARHGACQ RSCLASLDPY CGWHRSRGCM SIRGPGGTDV 400
    DLTGNQESTE HGDCQDGATG SQSGPGDSAY GVRRDLSPAS ASRSIPIPLL 450
    LACVAAAFAL GASVSGLLVS CACRRANRRR SKDIETPGLP RPLSLRSLAR 500
    LHGGGPEPPP PPKDGDAAQT PQLYTTFLPP PDGGSPPELA CLPTPETTPE 550
    LPVKHLRASG GPWEWNQNGN NASEGPGRPP RGCSGAGGPA PRVLVRPPPP 600
    GCPGQAVEVT TLEELLRYLH GPQPPRKGSE PLASAPFTSR PPASEPGASL 650
    FVDSSPMPRD GVPPLRLDVP PEGKRAAPSG RPALSAPAPR LGVGGSRRLP 700
    FPTHRAPPGL LTRVPSGGPA RYSGGPGRHL LYLGRPEGHR GRSLKRVDVK 750
    SPLSPKPPLA SPPQPAPHGG HFNF 774
    Length:774
    Mass (Da):82,108
    Last modified:July 5, 2004 - v1
    Checksum:iA930A85A9EEFC00A
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Non-terminal residuei1 – 11Imported

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK129459 mRNA. Translation: BAC98269.1.
    UniGeneiMm.23662.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK129459 mRNA. Translation: BAC98269.1 .
    UniGenei Mm.23662.

    3D structure databases

    ProteinModelPortali Q6ZPG8.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Organism-specific databases

    MGIi MGI:1338032. Sema6c.

    Phylogenomic databases

    HOVERGENi HBG072910.

    Miscellaneous databases

    SOURCEi Search...

    Gene expression databases

    ArrayExpressi Q6ZPG8.
    Bgeei Q6ZPG8.
    Genevestigatori Q6ZPG8.

    Family and domain databases

    Gene3Di 2.130.10.10. 1 hit.
    InterProi IPR016201. Plexin-like_fold.
    IPR002165. Plexin_repeat.
    IPR001627. Semap_dom.
    IPR027231. Semaphorin.
    IPR015514. Semaphorin_6C.
    IPR015943. WD40/YVTN_repeat-like_dom.
    [Graphical view ]
    PANTHERi PTHR11036. PTHR11036. 1 hit.
    PTHR11036:SF11. PTHR11036:SF11. 1 hit.
    Pfami PF01437. PSI. 1 hit.
    PF01403. Sema. 1 hit.
    [Graphical view ]
    SMARTi SM00423. PSI. 1 hit.
    SM00630. Sema. 1 hit.
    [Graphical view ]
    SUPFAMi SSF101912. SSF101912. 1 hit.
    SSF103575. SSF103575. 1 hit.
    PROSITEi PS51004. SEMA. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Prediction of the coding sequences of mouse homologues of KIAA gene: III. The complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries."
      Okazaki N., Kikuno R., Ohara R., Inamoto S., Koseki H., Hiraoka S., Saga Y., Nagase T., Ohara O., Koga H.
      DNA Res. 10:167-180(2003) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Tissue: Embryonic tailImported.

    Entry informationi

    Entry nameiQ6ZPG8_MOUSE
    AccessioniPrimary (citable) accession number: Q6ZPG8
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 5, 2004
    Last sequence update: July 5, 2004
    Last modified: October 1, 2014
    This is version 63 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)