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Q6ZM72 (Q6ZM72_DANRE) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 92. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length1058 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Subcellular location

Nucleus By similarity RuleBase RU004542.

Sequence similarities

Contains 1 SET domain. RuleBase RU004538

Contains 1 pre-SET domain. RuleBase RU004542

Contains 6 ANK repeats. RuleBase RU003321

Contains SET domain. SAAS SAAS001214

Contains pre-SET domain. SAAS SAAS001214

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSDARP00000107170

Sequences

Sequence LengthMass (Da)Tools
Q6ZM72 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: 23A1FBC894960758

FASTA1,058118,047
        10         20         30         40         50         60 
MAKTKKGMDS LADPQRKGKR PKSLGASPKA SKQLSASGSR KSTGSSFQLL SGQTSLKPPA 

        70         80         90        100        110        120 
ENIISGNHSS VQQDKPETLE KQSFGSDNAD KRIPVVSVPE AAHEEDEQRE PEGVKVVKPA 

       130        140        150        160        170        180 
PPRLAWKTMV RSAPAPPALK TLNRERSGYE RDVESSPTQH LSLPQELKDS TQTAPKKKKR 

       190        200        210        220        230        240 
KMGLYNFVPK KKPKGSKKAN VSLSSSNLQE ALRMTGSKGG QMSIEEAFRN KASSEKPEKQ 

       250        260        270        280        290        300 
TSTAVIEDAE PHQNKETEDA PEGPAEEYTE LPLHALAHDS LFTTIPTGLR EDKENMETDD 

       310        320        330        340        350        360 
TLEPPLCSCR METPKNQDVV TLAEGKCMAV ESVDGKLSLC RKVIMKQELM RPSLRIPQLV 

       370        380        390        400        410        420 
LCEDHRAGMV KHQSCPGCGF FCRAGTFMEC QPDGNISHRF HRSCASLIRG QVYCPHCGEE 

       430        440        450        460        470        480 
ASHAKEVTIP KPDCVASVPT AAVPAHKRDN ALMDRVKLDS VMVDGAGDLA KESLESVLNA 

       490        500        510        520        530        540 
LEDGKYKKFK LPPKQLYFSA KRGELQRILH MLVEGVDPNL RMDSEKRKTP LHCAAEEGHK 

       550        560        570        580        590        600 
DICHVLVQAG ANLDMCDIEQ RTPLMYACNN NHLENVKYLL KAGASSAHKD MRGSTCLHLA 

       610        620        630        640        650        660 
ARAGHTNVLQ YLLSLPSIDV NCKDDGGWAP LTWATENMRL EQVKMLISAG ADVQIRDKEE 

       670        680        690        700        710        720 
NLCLHWAAFS GCDEIAQLLL DHRSDLHAVN VHGDTPLHIA VRQNQLDCVM LFLSRGADVN 

       730        740        750        760        770        780 
LKNRDGETPL GCCNINSKMW TILNTNKKLT DARRGRESLR ERLLCRDVSR GYEDIPVPCV 

       790        800        810        820        830        840 
NGVDHEPCPS NFKYIPENCF TSQVNIDENI KHLQHCSCKD DCASSSCICG QLSMHCWYGK 

       850        860        870        880        890        900 
DGRLLKEFCR DDPPFLFECN HACSCWRTCR NRVIQNGLRL RLQVFRTERM GWGVRTLQDI 

       910        920        930        940        950        960 
PEGGFVCEFA GEIISDGEAN IRENDSYMFN LDNKAKAYCI DGQFYGNVSR FMNHLCEPNL 

       970        980        990       1000       1010       1020 
FPVRVFTKHQ DMRFPRIAFF ASKHIQAGDE LGFDYGDHYW QIKKKYFRCQ CGSGKCRYSE 

      1030       1040       1050 
VVPDRNHAES SAQTLSNQTV AQVEHIQSSN TAIAITQP 

« Hide

References

« Hide 'large scale' references
[1]"The zebrafish reference genome sequence and its relationship to the human genome."
Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C., Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L., McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C., Koch R., Rauch G.J. expand/collapse author list , White S., Chow W., Kilian B., Quintais L.T., Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T., Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F., Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H., Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M., Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J., Clee C., Oliver K., Clark R., Riddle C., Eliott D., Threadgold G., Harden G., Ware D., Mortimer B., Kerry G., Heath P., Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J., Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P., Barker N., Stevens C., Harley J., Holt K., Panagiotidis G., Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D., Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K., Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C., Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J., Murnane C., Gray E., Humphries M., Sycamore N., Barker D., Saunders D., Wallis J., Babbage A., Hammond S., Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A., Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J., Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E., Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D., Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z., Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J., Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C., Yang F., Carter N.P., Harrow J., Ning Z., Herrero J., Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C., Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H., Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J., Stemple D.L.
Nature 496:498-503(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Tuebingen Ensembl ENSDARP00000107170.
[2]Ensembl
Submitted (AUG-2013) to UniProtKB
Cited for: IDENTIFICATION.
Strain: Tuebingen Ensembl ENSDARP00000107170.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AL831768 Genomic DNA. No translation available.
AL929342 Genomic DNA. No translation available.
RefSeqNP_001025302.1. NM_001030131.2.
XP_005171837.1. XM_005171780.1.
UniGeneDr.83090.

3D structure databases

ProteinModelPortalQ6ZM72.
SMRQ6ZM72. Positions 519-752, 764-1019.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING7955.ENSDARP00000089135.

Proteomic databases

PRIDEQ6ZM72.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSDART00000126018; ENSDARP00000107170; ENSDARG00000068157.
GeneID100005761.
KEGGdre:100005761.

Organism-specific databases

CTD100005761.
ZFINZDB-GENE-040724-44. ehmt1a.

Phylogenomic databases

GeneTreeENSGT00750000117632.
HOVERGENHBG028394.
InParanoidQ6ZM72.
KOK11420.
OrthoDBEOG744T8D.

Family and domain databases

Gene3D1.25.40.20. 3 hits.
InterProIPR002110. Ankyrin_rpt.
IPR020683. Ankyrin_rpt-contain_dom.
IPR007728. Pre-SET_dom.
IPR001214. SET_dom.
[Graphical view]
PfamPF12796. Ank_2. 3 hits.
PF05033. Pre-SET. 1 hit.
PF00856. SET. 1 hit.
[Graphical view]
PRINTSPR01415. ANKYRIN.
SMARTSM00248. ANK. 6 hits.
SM00317. SET. 1 hit.
[Graphical view]
SUPFAMSSF48403. SSF48403. 1 hit.
PROSITEPS50297. ANK_REP_REGION. 1 hit.
PS50088. ANK_REPEAT. 5 hits.
PS50867. PRE_SET. 1 hit.
PS50280. SET. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio20786824.

Entry information

Entry nameQ6ZM72_DANRE
AccessionPrimary (citable) accession number: Q6ZM72
Entry history
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: June 11, 2014
This is version 92 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)