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Q6ZJJ0

- BGA11_ORYSJ

UniProt

Q6ZJJ0 - BGA11_ORYSJ

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Protein

Beta-galactosidase 11

Gene

Os08g0549200

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli

Functioni

Catalytic activityi

Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei189 – 1891Proton donorSequence Analysis
Active sitei260 – 2601NucleophileSequence Analysis

GO - Molecular functioni

  1. beta-galactosidase activity Source: UniProtKB-EC
  2. carbohydrate binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Glycosidase, Hydrolase

Protein family/group databases

CAZyiGH35. Glycoside Hydrolase Family 35.

Names & Taxonomyi

Protein namesi
Recommended name:
Beta-galactosidase 11 (EC:3.2.1.23)
Alternative name(s):
Lactase 115
Gene namesi
Ordered Locus Names:Os08g0549200, LOC_Os08g43570
ORF Names:OJ1479_B11.10
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
ProteomesiUP000000763: Chromosome 8

Organism-specific databases

GrameneiQ6ZJJ0.

Subcellular locationi

GO - Cellular componenti

  1. apoplast Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Apoplast, Secreted

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2323Sequence AnalysisAdd
BLAST
Chaini24 – 848825Beta-galactosidase 11PRO_0000294163Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Glycosylationi29 – 291N-linked (GlcNAc...)Sequence Analysis
Glycosylationi261 – 2611N-linked (GlcNAc...)Sequence Analysis
Glycosylationi472 – 4721N-linked (GlcNAc...)Sequence Analysis
Glycosylationi783 – 7831N-linked (GlcNAc...)Sequence Analysis

Keywords - PTMi

Glycoprotein

Proteomic databases

PaxDbiQ6ZJJ0.
PRIDEiQ6ZJJ0.

Expressioni

Gene expression databases

ExpressionAtlasiQ6ZJJ0. baseline.

Structurei

3D structure databases

ProteinModelPortaliQ6ZJJ0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini750 – 83788SUEL-type lectinPROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Belongs to the glycosyl hydrolase 35 family.Curated
Contains 1 SUEL-type lectin domain.PROSITE-ProRule annotation

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiCOG1874.
HOGENOMiHOG000239919.
InParanoidiQ6ZJJ0.
OMAiHNTKEDG.

Family and domain databases

Gene3Di2.60.120.260. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR008979. Galactose-bd-like.
IPR019801. Glyco_hydro_35_CS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR001944. Glycoside_Hdrlase_35.
IPR017853. Glycoside_hydrolase_SF.
IPR000922. Lectin_gal-bd_dom.
[Graphical view]
PANTHERiPTHR23421. PTHR23421. 1 hit.
PfamiPF02140. Gal_Lectin. 1 hit.
PF01301. Glyco_hydro_35. 1 hit.
[Graphical view]
PRINTSiPR00742. GLHYDRLASE35.
SUPFAMiSSF49785. SSF49785. 2 hits.
SSF51445. SSF51445. 1 hit.
PROSITEiPS01182. GLYCOSYL_HYDROL_F35. 1 hit.
PS50228. SUEL_LECTIN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q6ZJJ0-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSAAAVLAVV AAAVAALAAA ASGYELTKNG TVITYDRRSL IIDGHREIFF
60 70 80 90 100
SGSIHYPRSP PDTWPDLISK AKEGGLNVIE SYVFWNGHEP EQGVYNFEGR
110 120 130 140 150
YDLIKFFKLI QEKEMYAIVR IGPFVQAEWN HGGLPYWLRE IPDIIFRTNN
160 170 180 190 200
EPFKKYMKQF VTLIVNKLKE AKLFASQGGP IILAQIENEY QHLEVAFKEA
210 220 230 240 250
GTKYINWAAK MAIATNTGVP WIMCKQTKAP GEVIPTCNGR HCGDTWPGPA
260 270 280 290 300
DKKKPLLWTE NWTAQYRVFG DPPSQRSAED IAFSVARFFS VGGTMANYYM
310 320 330 340 350
YHGGTNFGRN GAAFVMPRYY DEAPLDEFGL YKEPKWGHLR DLHHALRHCK
360 370 380 390 400
KALLWGNPSV QPLGKLYEAR VFEMKEKNVC VAFLSNHNTK EDGTVTFRGQ
410 420 430 440 450
KYFVARRSIS ILADCKTVVF STQHVNSQHN QRTFHFADQT VQDNVWEMYS
460 470 480 490 500
EEKIPRYSKT SIRTQRPLEQ YNQTKDKTDY LWYTTSFRLE TDDLPYRKEV
510 520 530 540 550
KPVLEVSSHG HAIVAFVNDA FVGCGHGTKI NKAFTMEKAM DLKVGVNHVA
560 570 580 590 600
ILSSTLGLMD SGSYLEHRMA GVYTVTIRGL NTGTLDLTTN GWGHVVGLDG
610 620 630 640 650
ERRRVHSEQG MGAVAWKPGK DNQPLTWYRR RFDPPSGTDP VVIDLTPMGK
660 670 680 690 700
GFLFVNGEGL GRYWVSYHHA LGKPSQYLYH VPRSLLRPKG NTLMFFEEEG
710 720 730 740 750
GKPDAIMILT VKRDNICTFM TEKNPAHVRW SWESKDSQPK AVAGAGAGAG
760 770 780 790 800
GLKPTAVLSC PTKKTIQSVV FASYGNPLGI CGNYTVGSCH APRTKEVVEK
810 820 830 840
ACIGRKTCSL VVSSEVYGGD VHCPGTTGTL AVQAKCSKRP PRSAATAQ
Length:848
Mass (Da):94,739
Last modified:July 5, 2004 - v1
Checksum:i81C585356683BA05
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti560 – 5601D → N in AK069066. (PubMed:12869764)Curated
Sequence conflicti571 – 5711G → R in AK069066. (PubMed:12869764)Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP003912 Genomic DNA. Translation: BAD08952.1.
AP008214 Genomic DNA. Translation: BAF24354.1.
AK069066 mRNA. No translation available.
RefSeqiNP_001062440.1. NM_001068975.1.
UniGeneiOs.18310.

Genome annotation databases

EnsemblPlantsiOS08T0549200-01; OS08T0549200-01; OS08G0549200.
GeneIDi4346248.
KEGGiosa:4346248.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP003912 Genomic DNA. Translation: BAD08952.1 .
AP008214 Genomic DNA. Translation: BAF24354.1 .
AK069066 mRNA. No translation available.
RefSeqi NP_001062440.1. NM_001068975.1.
UniGenei Os.18310.

3D structure databases

ProteinModelPortali Q6ZJJ0.
ModBasei Search...
MobiDBi Search...

Protein family/group databases

CAZyi GH35. Glycoside Hydrolase Family 35.

Proteomic databases

PaxDbi Q6ZJJ0.
PRIDEi Q6ZJJ0.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi OS08T0549200-01 ; OS08T0549200-01 ; OS08G0549200 .
GeneIDi 4346248.
KEGGi osa:4346248.

Organism-specific databases

Gramenei Q6ZJJ0.

Phylogenomic databases

eggNOGi COG1874.
HOGENOMi HOG000239919.
InParanoidi Q6ZJJ0.
OMAi HNTKEDG.

Gene expression databases

ExpressionAtlasi Q6ZJJ0. baseline.

Family and domain databases

Gene3Di 2.60.120.260. 1 hit.
3.20.20.80. 1 hit.
InterProi IPR008979. Galactose-bd-like.
IPR019801. Glyco_hydro_35_CS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR001944. Glycoside_Hdrlase_35.
IPR017853. Glycoside_hydrolase_SF.
IPR000922. Lectin_gal-bd_dom.
[Graphical view ]
PANTHERi PTHR23421. PTHR23421. 1 hit.
Pfami PF02140. Gal_Lectin. 1 hit.
PF01301. Glyco_hydro_35. 1 hit.
[Graphical view ]
PRINTSi PR00742. GLHYDRLASE35.
SUPFAMi SSF49785. SSF49785. 2 hits.
SSF51445. SSF51445. 1 hit.
PROSITEi PS01182. GLYCOSYL_HYDROL_F35. 1 hit.
PS50228. SUEL_LECTIN. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  2. "The rice annotation project database (RAP-DB): 2008 update."
    The rice annotation project (RAP)
    Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: cv. Nipponbare.
  3. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
    The rice full-length cDNA consortium
    Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Nipponbare.

Entry informationi

Entry nameiBGA11_ORYSJ
AccessioniPrimary (citable) accession number: Q6ZJJ0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 10, 2007
Last sequence update: July 5, 2004
Last modified: October 29, 2014
This is version 71 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3