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Q6ZJJ0

- BGA11_ORYSJ

UniProt

Q6ZJJ0 - BGA11_ORYSJ

Protein

Beta-galactosidase 11

Gene

Os08g0549200

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 70 (01 Oct 2014)
      Sequence version 1 (05 Jul 2004)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides.

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei189 – 1891Proton donorSequence Analysis
    Active sitei260 – 2601NucleophileSequence Analysis

    GO - Molecular functioni

    1. beta-galactosidase activity Source: UniProtKB-EC
    2. carbohydrate binding Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro

    Keywords - Molecular functioni

    Glycosidase, Hydrolase

    Protein family/group databases

    CAZyiGH35. Glycoside Hydrolase Family 35.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Beta-galactosidase 11 (EC:3.2.1.23)
    Alternative name(s):
    Lactase 115
    Gene namesi
    Ordered Locus Names:Os08g0549200, LOC_Os08g43570
    ORF Names:OJ1479_B11.10
    OrganismiOryza sativa subsp. japonica (Rice)
    Taxonomic identifieri39947 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
    ProteomesiUP000000763: Chromosome 8

    Organism-specific databases

    GrameneiQ6ZJJ0.

    Subcellular locationi

    GO - Cellular componenti

    1. apoplast Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Apoplast, Secreted

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 2323Sequence AnalysisAdd
    BLAST
    Chaini24 – 848825Beta-galactosidase 11PRO_0000294163Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Glycosylationi29 – 291N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi261 – 2611N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi472 – 4721N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi783 – 7831N-linked (GlcNAc...)Sequence Analysis

    Keywords - PTMi

    Glycoprotein

    Proteomic databases

    PaxDbiQ6ZJJ0.
    PRIDEiQ6ZJJ0.

    Structurei

    3D structure databases

    ProteinModelPortaliQ6ZJJ0.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Domaini750 – 83788SUEL-type lectinPROSITE-ProRule annotationAdd
    BLAST

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 35 family.Curated
    Contains 1 SUEL-type lectin domain.PROSITE-ProRule annotation

    Keywords - Domaini

    Signal

    Phylogenomic databases

    eggNOGiCOG1874.
    HOGENOMiHOG000239919.
    OMAiHNTKEDG.

    Family and domain databases

    Gene3Di2.60.120.260. 1 hit.
    3.20.20.80. 1 hit.
    InterProiIPR008979. Galactose-bd-like.
    IPR019801. Glyco_hydro_35_CS.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR001944. Glycoside_Hdrlase_35.
    IPR017853. Glycoside_hydrolase_SF.
    IPR000922. Lectin_gal-bd_dom.
    [Graphical view]
    PANTHERiPTHR23421. PTHR23421. 1 hit.
    PfamiPF02140. Gal_Lectin. 1 hit.
    PF01301. Glyco_hydro_35. 1 hit.
    [Graphical view]
    PRINTSiPR00742. GLHYDRLASE35.
    SUPFAMiSSF49785. SSF49785. 2 hits.
    SSF51445. SSF51445. 1 hit.
    PROSITEiPS01182. GLYCOSYL_HYDROL_F35. 1 hit.
    PS50228. SUEL_LECTIN. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    Q6ZJJ0-1 [UniParc]FASTAAdd to Basket

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    MSAAAVLAVV AAAVAALAAA ASGYELTKNG TVITYDRRSL IIDGHREIFF    50
    SGSIHYPRSP PDTWPDLISK AKEGGLNVIE SYVFWNGHEP EQGVYNFEGR 100
    YDLIKFFKLI QEKEMYAIVR IGPFVQAEWN HGGLPYWLRE IPDIIFRTNN 150
    EPFKKYMKQF VTLIVNKLKE AKLFASQGGP IILAQIENEY QHLEVAFKEA 200
    GTKYINWAAK MAIATNTGVP WIMCKQTKAP GEVIPTCNGR HCGDTWPGPA 250
    DKKKPLLWTE NWTAQYRVFG DPPSQRSAED IAFSVARFFS VGGTMANYYM 300
    YHGGTNFGRN GAAFVMPRYY DEAPLDEFGL YKEPKWGHLR DLHHALRHCK 350
    KALLWGNPSV QPLGKLYEAR VFEMKEKNVC VAFLSNHNTK EDGTVTFRGQ 400
    KYFVARRSIS ILADCKTVVF STQHVNSQHN QRTFHFADQT VQDNVWEMYS 450
    EEKIPRYSKT SIRTQRPLEQ YNQTKDKTDY LWYTTSFRLE TDDLPYRKEV 500
    KPVLEVSSHG HAIVAFVNDA FVGCGHGTKI NKAFTMEKAM DLKVGVNHVA 550
    ILSSTLGLMD SGSYLEHRMA GVYTVTIRGL NTGTLDLTTN GWGHVVGLDG 600
    ERRRVHSEQG MGAVAWKPGK DNQPLTWYRR RFDPPSGTDP VVIDLTPMGK 650
    GFLFVNGEGL GRYWVSYHHA LGKPSQYLYH VPRSLLRPKG NTLMFFEEEG 700
    GKPDAIMILT VKRDNICTFM TEKNPAHVRW SWESKDSQPK AVAGAGAGAG 750
    GLKPTAVLSC PTKKTIQSVV FASYGNPLGI CGNYTVGSCH APRTKEVVEK 800
    ACIGRKTCSL VVSSEVYGGD VHCPGTTGTL AVQAKCSKRP PRSAATAQ 848
    Length:848
    Mass (Da):94,739
    Last modified:July 5, 2004 - v1
    Checksum:i81C585356683BA05
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Sequence conflicti560 – 5601D → N in AK069066. (PubMed:12869764)Curated
    Sequence conflicti571 – 5711G → R in AK069066. (PubMed:12869764)Curated

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP003912 Genomic DNA. Translation: BAD08952.1.
    AP008214 Genomic DNA. Translation: BAF24354.1.
    AK069066 mRNA. No translation available.
    RefSeqiNP_001062440.1. NM_001068975.1.
    UniGeneiOs.18310.

    Genome annotation databases

    EnsemblPlantsiOS08T0549200-01; OS08T0549200-01; OS08G0549200.
    GeneIDi4346248.
    KEGGiosa:4346248.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP003912 Genomic DNA. Translation: BAD08952.1 .
    AP008214 Genomic DNA. Translation: BAF24354.1 .
    AK069066 mRNA. No translation available.
    RefSeqi NP_001062440.1. NM_001068975.1.
    UniGenei Os.18310.

    3D structure databases

    ProteinModelPortali Q6ZJJ0.
    ModBasei Search...
    MobiDBi Search...

    Protein family/group databases

    CAZyi GH35. Glycoside Hydrolase Family 35.

    Proteomic databases

    PaxDbi Q6ZJJ0.
    PRIDEi Q6ZJJ0.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi OS08T0549200-01 ; OS08T0549200-01 ; OS08G0549200 .
    GeneIDi 4346248.
    KEGGi osa:4346248.

    Organism-specific databases

    Gramenei Q6ZJJ0.

    Phylogenomic databases

    eggNOGi COG1874.
    HOGENOMi HOG000239919.
    OMAi HNTKEDG.

    Family and domain databases

    Gene3Di 2.60.120.260. 1 hit.
    3.20.20.80. 1 hit.
    InterProi IPR008979. Galactose-bd-like.
    IPR019801. Glyco_hydro_35_CS.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR001944. Glycoside_Hdrlase_35.
    IPR017853. Glycoside_hydrolase_SF.
    IPR000922. Lectin_gal-bd_dom.
    [Graphical view ]
    PANTHERi PTHR23421. PTHR23421. 1 hit.
    Pfami PF02140. Gal_Lectin. 1 hit.
    PF01301. Glyco_hydro_35. 1 hit.
    [Graphical view ]
    PRINTSi PR00742. GLHYDRLASE35.
    SUPFAMi SSF49785. SSF49785. 2 hits.
    SSF51445. SSF51445. 1 hit.
    PROSITEi PS01182. GLYCOSYL_HYDROL_F35. 1 hit.
    PS50228. SUEL_LECTIN. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    2. "The rice annotation project database (RAP-DB): 2008 update."
      The rice annotation project (RAP)
      Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENOME REANNOTATION.
      Strain: cv. Nipponbare.
    3. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
      The rice full-length cDNA consortium
      Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Strain: cv. Nipponbare.

    Entry informationi

    Entry nameiBGA11_ORYSJ
    AccessioniPrimary (citable) accession number: Q6ZJJ0
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: July 10, 2007
    Last sequence update: July 5, 2004
    Last modified: October 1, 2014
    This is version 70 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Glycosyl hydrolases
      Classification of glycosyl hydrolase families and list of entries
    2. Oryza sativa (rice)
      Index of Oryza sativa entries and their corresponding gene designations
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3