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Protein

Probable protein phosphatase 2C 25

Gene

Os02g0685600

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

Catalytic activityi

[a protein]-serine/threonine phosphate + H2O = [a protein]-serine/threonine + phosphate.

Cofactori

Mg2+By similarity, Mn2+By similarityNote: Binds 2 magnesium or manganese ions per subunit.By similarity

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi83 – 831Manganese 1By similarity
Metal bindingi83 – 831Manganese 2By similarity
Metal bindingi84 – 841Manganese 1; via carbonyl oxygenBy similarity
Metal bindingi283 – 2831Manganese 2By similarity
Metal bindingi342 – 3421Manganese 2By similarity

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Hydrolase, Protein phosphatase

Keywords - Ligandi

Magnesium, Manganese, Metal-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Probable protein phosphatase 2C 25 (EC:3.1.3.16)
Short name:
OsPP2C25
Gene namesi
Ordered Locus Names:Os02g0685600, LOC_Os02g46080
ORF Names:OJ1717_A09.24
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryza
ProteomesiUP000000763 Componenti: Chromosome 2

Organism-specific databases

GrameneiQ6ZHC8.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 387387Probable protein phosphatase 2C 25PRO_0000363271Add
BLAST

Proteomic databases

PRIDEiQ6ZHC8.

Expressioni

Gene expression databases

ExpressionAtlasiQ6ZHC8. baseline and differential.

Interactioni

Protein-protein interaction databases

STRINGi39947.LOC_Os02g46080.1.

Structurei

3D structure databases

ProteinModelPortaliQ6ZHC8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini52 – 351300PPM-type phosphatasePROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Belongs to the PP2C family.Curated
Contains 1 PPM-type phosphatase domain.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiCOG0631.
InParanoidiQ6ZHC8.
KOiK01102.
OMAiAQENGTI.

Family and domain databases

Gene3Di3.60.40.10. 1 hit.
InterProiIPR015655. PP2C.
IPR000222. PP2C_BS.
IPR001932. PPM-type_phosphatase_dom.
[Graphical view]
PANTHERiPTHR13832. PTHR13832. 1 hit.
PfamiPF00481. PP2C. 1 hit.
[Graphical view]
SMARTiSM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
[Graphical view]
SUPFAMiSSF81606. SSF81606. 1 hit.
PROSITEiPS01032. PPM_1. 1 hit.
PS51746. PPM_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q6ZHC8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFSWLLRIAS ACLGPARRYA RTRKDEDGGD NGGGVADGLL WSRDLGRHAA
60 70 80 90 100
GEFSFAVVQA NEALEDHSQV ETGSAATFVG VYDGHGGADA ARFISDHLFA
110 120 130 140 150
HLIRLARESE TVSEEVVRGA FSATEEGFLT LVRRTQFLKP MIAAVGSCCL
160 170 180 190 200
VGIIWRGVLY VANLGDSRAV VGYLGRTNKI TAEQITRDHN ACKEEVRQEL
210 220 230 240 250
ISRHPDDSQI VVLKHGVWRI KGIIQVSRTI GDAYLKRREF ALDPSITRFR
260 270 280 290 300
LSEPLRRPVL TAEPSICTRV LSLQDQFVIF ASDGLWEHLT NQQAVDIVYK
310 320 330 340 350
NPRAGIAKRL VNTALKEAAR KREMRFVDLK KVEKGVRRFF HDDITVVVVY
360 370 380
IDHELLQEKN VSVPELSVRG FVDSVGPSRI SGFDAIS
Length:387
Mass (Da):43,012
Last modified:July 5, 2004 - v1
Checksum:iB4441AA13D31E49F
GO

Sequence cautioni

The sequence AK111835 differs from that shown. Reason: Frameshift at position 387. Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP004071 Genomic DNA. Translation: BAD07571.1.
AP008208 Genomic DNA. Translation: BAF09680.1.
AK111835 mRNA. No translation available.
RefSeqiNP_001047766.1. NM_001054301.1.
UniGeneiOs.74440.

Genome annotation databases

EnsemblPlantsiOS02T0685600-01; OS02T0685600-01; OS02G0685600.
GeneIDi4330350.
KEGGiosa:4330350.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP004071 Genomic DNA. Translation: BAD07571.1.
AP008208 Genomic DNA. Translation: BAF09680.1.
AK111835 mRNA. No translation available.
RefSeqiNP_001047766.1. NM_001054301.1.
UniGeneiOs.74440.

3D structure databases

ProteinModelPortaliQ6ZHC8.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi39947.LOC_Os02g46080.1.

Proteomic databases

PRIDEiQ6ZHC8.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiOS02T0685600-01; OS02T0685600-01; OS02G0685600.
GeneIDi4330350.
KEGGiosa:4330350.

Organism-specific databases

GrameneiQ6ZHC8.

Phylogenomic databases

eggNOGiCOG0631.
InParanoidiQ6ZHC8.
KOiK01102.
OMAiAQENGTI.

Gene expression databases

ExpressionAtlasiQ6ZHC8. baseline and differential.

Family and domain databases

Gene3Di3.60.40.10. 1 hit.
InterProiIPR015655. PP2C.
IPR000222. PP2C_BS.
IPR001932. PPM-type_phosphatase_dom.
[Graphical view]
PANTHERiPTHR13832. PTHR13832. 1 hit.
PfamiPF00481. PP2C. 1 hit.
[Graphical view]
SMARTiSM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
[Graphical view]
SUPFAMiSSF81606. SSF81606. 1 hit.
PROSITEiPS01032. PPM_1. 1 hit.
PS51746. PPM_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  2. "The rice annotation project database (RAP-DB): 2008 update."
    The rice annotation project (RAP)
    Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: cv. Nipponbare.
  3. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
    The rice full-length cDNA consortium
    Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Nipponbare.
  4. "Genome-wide and expression analysis of protein phosphatase 2C in rice and Arabidopsis."
    Xue T., Wang D., Zhang S., Ehlting J., Ni F., Jacab S., Zheng C., Zhong Y.
    BMC Genomics 9:550-550(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENE FAMILY, NOMENCLATURE.

Entry informationi

Entry nameiP2C25_ORYSJ
AccessioniPrimary (citable) accession number: Q6ZHC8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 10, 2009
Last sequence update: July 5, 2004
Last modified: June 24, 2015
This is version 71 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.