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Protein
Submitted name:

Putative photoperiod independent early flowering1

Gene

OJ1743_B12.28

Organism
Oryza sativa subsp. japonica (Rice)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
Putative photoperiod independent early flowering1Imported
Gene namesi
Name:OJ1743_B12.28Imported
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryzaOryza sativa

PTM / Processingi

Proteomic databases

PaxDbiQ6ZGY4.

Structurei

3D structure databases

ProteinModelPortaliQ6ZGY4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini23 – 95HSAInterPro annotationAdd BLAST73
Domaini533 – 698Helicase ATP-bindingInterPro annotationAdd BLAST166
Domaini1060 – 1210Helicase C-terminalInterPro annotationAdd BLAST151
Domaini1639 – 1700Myb-likeInterPro annotationAdd BLAST62

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili111 – 138Sequence analysisAdd BLAST28
Coiled coili1400 – 1434Sequence analysisAdd BLAST35
Coiled coili1455 – 1493Sequence analysisAdd BLAST39

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG0388. Eukaryota.
ENOG410XP0A. LUCA.
InParanoidiQ6ZGY4.
OrthoDBiEOG093600BW.

Family and domain databases

InterProiView protein in InterPro
IPR014001. Helicase_ATP-bd.
IPR001650. Helicase_C.
IPR014012. HSA_dom.
IPR017877. Myb-like_dom.
IPR027417. P-loop_NTPase.
IPR000330. SNF2_N.
PfamiView protein in Pfam
PF00271. Helicase_C. 1 hit.
PF07529. HSA. 1 hit.
PF00176. SNF2_N. 1 hit.
SMARTiView protein in SMART
SM00487. DEXDc. 1 hit.
SM00490. HELICc. 1 hit.
SM00573. HSA. 1 hit.
SUPFAMiSSF52540. SSF52540. 3 hits.
PROSITEiView protein in PROSITE
PS51192. HELICASE_ATP_BIND_1. 1 hit.
PS51194. HELICASE_CTER. 1 hit.
PS51204. HSA. 1 hit.
PS50090. MYB_LIKE. 1 hit.

Sequencei

Sequence statusi: Complete.

Q6ZGY4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASKGPRSKL DHETRARRQK ALEAPRGEPR RTKTHWDHLL GEMAWLAKEF
60 70 80 90 100
DAERKWKLSM AKRIAQRANK GVVDQATKDE RKQKEEEVRL RKVALNISKD
110 120 130 140 150
VKKFWTKIEK LVFYKNQLEL EERKKKALDK QLDFLLGQTE RYSTMLAENL
160 170 180 190 200
VDVRLQNQEN DSLQTNQRSQ QELAQENINA SSPTDVDNVE IDDDYNSSLG
210 220 230 240 250
EEPKDDEHTI DEDEAQITEA ERNEELAALQ AEADLPLDDI LKLYTKNKDP
260 270 280 290 300
LNQANGCNDE SDHTSSDEGI SSEEADDYQS YSEFVKKNTV KCNGNISSVD
310 320 330 340 350
AKDDEDYVAN DEGKDDEATL SEEEELAKKE DCDPLDEVKL LQKESEIPLE
360 370 380 390 400
ELLARYQKDG YADDDTTELE NSPALSVEDV NANMPVDDES ADTVEVNRDL
410 420 430 440 450
SADTMKLTRD QSAETVKVNN DQSAEIVEGN NDTFEDHESA GMLGPEHVSG
460 470 480 490 500
SVLQLETSEP IVQENTAKEG DVTDTKAMAN GDNSDVIADA AAAARSAQPT
510 520 530 540 550
GNTFSTTNVR TKFPFLLKHS LREYQHIGLD WLVAMYEKRL NGILADEMGL
560 570 580 590 600
GKTIMTISLL AHLACEKGIW GPHLIVVPTS VMLNWETEFL KWCPAFKILT
610 620 630 640 650
YFGSAKERKQ KRQGWMKPNY FHVCITTYRL VIQDSKVFKR KKWKYLILDE
660 670 680 690 700
AHLIKNWKSQ RWQTLLNFNS KRRILLTGTP LQNDLMELWS LMHFLMPHVF
710 720 730 740 750
QSHQEFKDWF CNPISGMVEG QDKVNKEVID RLHNVLRPFI LRRLKRDVEK
760 770 780 790 800
QLPQKHEHVI YCRLSRRQRN LYEDFIASSE TQATLASGNY FGMISIIMQL
810 820 830 840 850
RKVCNHPDLF EGRPIISSFD MAGINMQISS SVGMVLDKGP FSQVDLSDMN
860 870 880 890 900
FVFTQNEYNM TSWEEDEVAA IFSPSITLRG SGISRSTNDG QRSNGTNIFE
910 920 930 940 950
EIHNSLWEER IKEANERAAS IAWWNRVRCQ KRPVYGTNIR EVLTIKHPVS
960 970 980 990 1000
DILEKKKNPL CHMEFSSSLA NLVLSSVDRF KTMLDFIESF TFAIPAARAP
1010 1020 1030 1040 1050
APLFWCNKGK SPVLIEPAYR EKCMNEFSPV FSPIRPAIVR RQVYFPDRRL
1060 1070 1080 1090 1100
IQFDCGKLQE LAILLRRLKS EGHRALIFTQ MTKMLDILEE FINLYGYTYL
1110 1120 1130 1140 1150
RLDGSTQPEE RQTLMQRFNT NPKFFLFILS TRSGGVGINL VGADTVIFYD
1160 1170 1180 1190 1200
SDWNPAMDQQ AQDRCHRIGQ TREVHIYRLI SESTIEENIL KKANQKRALD
1210 1220 1230 1240 1250
DLVIQRGSYN TEFFKKLDPM EFFSGHSSLH AENQQKDCSL SAGPSNGTNL
1260 1270 1280 1290 1300
ALSNVDVEAA IRQAEDEADY MALKRLEQEE AVDNQEFSEE AAGRLEEDDL
1310 1320 1330 1340 1350
VNEDDTKPDE HTNEEHKYQC SDLVKDKHVA LSINQLDEEK AITLAGGDGD
1360 1370 1380 1390 1400
IDMLADVKQM AAAAAAAGQA SSSFENQLRP IDRYAMRFLE LWDPIIDKAA
1410 1420 1430 1440 1450
INYQVNVEEE EWELERIEKL KEDLEAEIDE DQEPLSYESW DVDFATTAYR
1460 1470 1480 1490 1500
QHVEALAQKQ LFEEQERQAR EAAKELEEKN DNSTQRKKSK KNKKKAAKFK
1510 1520 1530 1540 1550
SLKKGRLSSE SEVMVEETSV DTMSIDDNAP SPELMSDESA HHHSNKHKRI
1560 1570 1580 1590 1600
MSTNEEENSN SRSLKKLKKA PKSSFSSEAL SPKHFLEGKQ LKLKDELNDS
1610 1620 1630 1640 1650
DPKSGARIKS DGRISVPCMP VKRVMVIKPE RLKKKSLWSR DCASDSWTTE
1660 1670 1680 1690 1700
EDAVLCATVN EYGPLWELAS DSLHSVPGGA FYRGRYRHPV HCCERFRELV
1710 1720 1730 1740 1750
CKHILSATDN SNSEKVPSGT GKAILKVSED QTQMLLNVIS ELPNNELLLQ
1760 1770 1780 1790 1800
KHFMAVLSSV WRSKSACESH CVMSYSNTLQ KPGRLSENWS MTNFRPNFNL
1810 1820 1830 1840 1850
VRTALADAQV QCPRMVVPTS NHESRRNFLE LELDFLTDRD DYEADFPSVV
1860 1870 1880 1890 1900
NVSILEPEPL KHAVEPVEHS LLSTLSYRHA ENRFRMVSET CFEGEGSHWA
1910 1920 1930 1940 1950
SSAFHTYDAG RHKSGPKSIG KHKASSESGR PPKSKIQRTT EPQEVPVTNN
1960 1970 1980 1990 2000
FHRIPGQLLH NSAEFHITQS LSDLGISDSE FTYFDNLPQE AETEFVPYQY
2010 2020
DSDVLSGIEE LDPLTDFTDI G
Length:2,021
Mass (Da):230,541
Last modified:July 5, 2004 - v1
Checksum:i95939237B5C72530
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP004096 Genomic DNA. Translation: BAD07677.1.
UniGeneiOs.17548.

Similar proteinsi

Entry informationi

Entry nameiQ6ZGY4_ORYSJ
AccessioniPrimary (citable) accession number: Q6ZGY4
Entry historyiIntegrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: August 30, 2017
This is version 71 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)