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Protein

Cyclin-dependent kinase C-3

Gene

CDKC-1

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + a protein = ADP + a phosphoprotein.
ATP + [DNA-directed RNA polymerase] = ADP + [DNA-directed RNA polymerase] phosphate.

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Binding sitei56ATPPROSITE-ProRule annotation1
Active sitei160Proton acceptorPROSITE-ProRule annotation1

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi33 – 41ATPPROSITE-ProRule annotation9

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionKinase, Serine/threonine-protein kinase, Transferase
LigandATP-binding, Nucleotide-binding

Enzyme and pathway databases

ReactomeiR-OSA-674695 RNA Polymerase II Pre-transcription Events
R-OSA-6796648 TP53 Regulates Transcription of DNA Repair Genes
R-OSA-6798695 Neutrophil degranulation
R-OSA-9018519 Estrogen-dependent gene expression

Names & Taxonomyi

Protein namesi
Recommended name:
Cyclin-dependent kinase C-3 (EC:2.7.11.22, EC:2.7.11.23)
Short name:
CDKC;3
Gene namesi
Name:CDKC-1
Ordered Locus Names:Os08g0453800, LOC_Os08g35220
ORF Names:OsJ_026440, P0048G02.5
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryzaOryza sativa
Proteomesi
  • UP000059680 Componenti: Chromosome 8

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002961021 – 324Cyclin-dependent kinase C-3Add BLAST324

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei37PhosphothreonineBy similarity1
Modified residuei38PhosphotyrosineBy similarity1
Modified residuei193PhosphothreonineBy similarity1

Keywords - PTMi

Phosphoprotein

Proteomic databases

PaxDbiQ6ZAG3

Expressioni

Gene expression databases

ExpressionAtlasiQ6ZAG3 differential

Interactioni

Protein-protein interaction databases

STRINGi39947.LOC_Os08g35220.1

Structurei

3D structure databases

ProteinModelPortaliQ6ZAG3
SMRiQ6ZAG3
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini27 – 320Protein kinasePROSITE-ProRule annotationAdd BLAST294

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG0600 Eukaryota
ENOG410XPIR LUCA
HOGENOMiHOG000233024

Family and domain databases

InterProiView protein in InterPro
IPR011009 Kinase-like_dom_sf
IPR000719 Prot_kinase_dom
IPR017441 Protein_kinase_ATP_BS
IPR008271 Ser/Thr_kinase_AS
PfamiView protein in Pfam
PF00069 Pkinase, 1 hit
SMARTiView protein in SMART
SM00220 S_TKc, 1 hit
SUPFAMiSSF56112 SSF56112, 1 hit
PROSITEiView protein in PROSITE
PS00107 PROTEIN_KINASE_ATP, 1 hit
PS50011 PROTEIN_KINASE_DOM, 1 hit
PS00108 PROTEIN_KINASE_ST, 1 hit

Sequencei

Sequence statusi: Complete.

Q6ZAG3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDGEEAPPGA LNLADYAPAG ARTVDCFRRI RKIGEGTYGE VFEAMDIITG
60 70 80 90 100
ERAALKKIKL DDGKEGFPRQ ILREIKLLKK LDHENIIRLK EIVVSPGTAH
110 120 130 140 150
GAGGSDDYMY RGDIYMVFEY MDHDLKKVLH HSTPSQVKYY MEQLLKGLHY
160 170 180 190 200
CHVNNVLHRD IKGANLLISG GGKLLKLADF GLARPFTRDG SFTNHVITLW
210 220 230 240 250
YRPPELLLGA TNYAEAVDIW SVGCIFAEFL LRKPLFPGRT EQEQLSKIFE
260 270 280 290 300
LCGFPNEENW PGVSKLPLYK TIRPTTPTKR RLRDIFHNFD SHAVDLIDRM
310 320
LILNPTERIS AHDALCAAYF ITKM
Length:324
Mass (Da):36,762
Last modified:July 24, 2007 - v2
Checksum:i5E56F7CC256597F9
GO

Sequence cautioni

The sequence BAD09782 differs from that shown. Reason: Erroneous gene model prediction.Curated
The sequence BAF23871 differs from that shown. Reason: Erroneous gene model prediction.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP004662 Genomic DNA Translation: BAD09782.1 Sequence problems.
AP008214 Genomic DNA Translation: BAF23871.1 Sequence problems.
AP014964 Genomic DNA No translation available.
CM000145 Genomic DNA No translation available.
RefSeqiXP_015650219.1, XM_015794733.1

Genome annotation databases

GeneIDi9268645
KEGGiosa:9268645

Similar proteinsi

Entry informationi

Entry nameiCDKC3_ORYSJ
AccessioniPrimary (citable) accession number: Q6ZAG3
Secondary accession number(s): Q0J594
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 24, 2007
Last sequence update: July 24, 2007
Last modified: May 23, 2018
This is version 95 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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