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Protein

Cyclin-dependent kinase C-3

Gene

CDKC-1

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + a protein = ADP + a phosphoprotein.
ATP + [DNA-directed RNA polymerase] = ADP + [DNA-directed RNA polymerase] phosphate.

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Binding sitei56ATPPROSITE-ProRule annotation1
Active sitei160Proton acceptorPROSITE-ProRule annotation1

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi33 – 41ATPPROSITE-ProRule annotation9

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionKinase, Serine/threonine-protein kinase, Transferase
LigandATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Cyclin-dependent kinase C-3 (EC:2.7.11.22, EC:2.7.11.23)
Short name:
CDKC;3
Gene namesi
Name:CDKC-1
Ordered Locus Names:Os08g0453800, LOC_Os08g35220
ORF Names:OsJ_026440, P0048G02.5
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryzaOryza sativa
Proteomesi
  • UP000059680 Componenti: Chromosome 8

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002961021 – 324Cyclin-dependent kinase C-3Add BLAST324

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei37PhosphothreonineBy similarity1
Modified residuei38PhosphotyrosineBy similarity1
Modified residuei193PhosphothreonineBy similarity1

Keywords - PTMi

Phosphoprotein

Proteomic databases

PaxDbiQ6ZAG3.

Interactioni

Protein-protein interaction databases

STRINGi39947.LOC_Os08g35220.1.

Structurei

3D structure databases

ProteinModelPortaliQ6ZAG3.
SMRiQ6ZAG3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini27 – 320Protein kinasePROSITE-ProRule annotationAdd BLAST294

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG0600. Eukaryota.
ENOG410XPIR. LUCA.
HOGENOMiHOG000233024.

Family and domain databases

InterProiView protein in InterPro
IPR011009. Kinase-like_dom_sf.
IPR000719. Prot_kinase_dom.
IPR017441. Protein_kinase_ATP_BS.
IPR008271. Ser/Thr_kinase_AS.
PfamiView protein in Pfam
PF00069. Pkinase. 1 hit.
SMARTiView protein in SMART
SM00220. S_TKc. 1 hit.
SUPFAMiSSF56112. SSF56112. 1 hit.
PROSITEiView protein in PROSITE
PS00107. PROTEIN_KINASE_ATP. 1 hit.
PS50011. PROTEIN_KINASE_DOM. 1 hit.
PS00108. PROTEIN_KINASE_ST. 1 hit.

Sequencei

Sequence statusi: Complete.

Q6ZAG3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDGEEAPPGA LNLADYAPAG ARTVDCFRRI RKIGEGTYGE VFEAMDIITG
60 70 80 90 100
ERAALKKIKL DDGKEGFPRQ ILREIKLLKK LDHENIIRLK EIVVSPGTAH
110 120 130 140 150
GAGGSDDYMY RGDIYMVFEY MDHDLKKVLH HSTPSQVKYY MEQLLKGLHY
160 170 180 190 200
CHVNNVLHRD IKGANLLISG GGKLLKLADF GLARPFTRDG SFTNHVITLW
210 220 230 240 250
YRPPELLLGA TNYAEAVDIW SVGCIFAEFL LRKPLFPGRT EQEQLSKIFE
260 270 280 290 300
LCGFPNEENW PGVSKLPLYK TIRPTTPTKR RLRDIFHNFD SHAVDLIDRM
310 320
LILNPTERIS AHDALCAAYF ITKM
Length:324
Mass (Da):36,762
Last modified:July 24, 2007 - v2
Checksum:i5E56F7CC256597F9
GO

Sequence cautioni

The sequence BAD09782 differs from that shown. Reason: Erroneous gene model prediction.Curated
The sequence BAF23871 differs from that shown. Reason: Erroneous gene model prediction.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP004662 Genomic DNA. Translation: BAD09782.1. Sequence problems.
AP008214 Genomic DNA. Translation: BAF23871.1. Sequence problems.
AP014964 Genomic DNA. No translation available.
CM000145 Genomic DNA. No translation available.
RefSeqiXP_015650219.1. XM_015794733.1.

Genome annotation databases

GeneIDi9268645.
KEGGiosa:9268645.

Similar proteinsi

Entry informationi

Entry nameiCDKC3_ORYSJ
AccessioniPrimary (citable) accession number: Q6ZAG3
Secondary accession number(s): Q0J594
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 24, 2007
Last sequence update: July 24, 2007
Last modified: November 22, 2017
This is version 92 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  2. SIMILARITY comments
    Index of protein domains and families