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Q6Z9C3

- 6PGL3_ORYSJ

UniProt

Q6Z9C3 - 6PGL3_ORYSJ

Protein

Probable 6-phosphogluconolactonase 3, chloroplastic

Gene

Os08g0547100

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 63 (01 Oct 2014)
      Sequence version 1 (05 Jul 2004)
      Previous versions | rss
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    Functioni

    Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.By similarity

    Catalytic activityi

    6-phospho-D-glucono-1,5-lactone + H2O = 6-phospho-D-gluconate.

    Pathwayi

    GO - Molecular functioni

    1. 6-phosphogluconolactonase activity Source: UniProtKB-EC

    GO - Biological processi

    1. cellular response to redox state Source: EnsemblPlants/Gramene
    2. defense response to bacterium Source: EnsemblPlants/Gramene
    3. defense response to oomycetes Source: EnsemblPlants/Gramene
    4. pentose-phosphate shunt Source: UniProtKB-UniPathway

    Keywords - Molecular functioni

    Hydrolase

    Enzyme and pathway databases

    UniPathwayiUPA00115; UER00409.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Probable 6-phosphogluconolactonase 3, chloroplastic (EC:3.1.1.31)
    Short name:
    6PGL 3
    Gene namesi
    Ordered Locus Names:Os08g0547100, LOC_Os08g43370
    ORF Names:OsJ_027038, P0544G09.8
    OrganismiOryza sativa subsp. japonica (Rice)
    Taxonomic identifieri39947 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
    ProteomesiUP000000763: Chromosome 8

    Organism-specific databases

    GrameneiQ6Z9C3.

    Subcellular locationi

    Plastidchloroplast Curated

    GO - Cellular componenti

    1. chloroplast stroma Source: EnsemblPlants/Gramene
    2. peroxisome Source: EnsemblPlants/Gramene
    3. vacuolar membrane Source: EnsemblPlants/Gramene

    Keywords - Cellular componenti

    Chloroplast, Plastid

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Transit peptidei1 – 7171ChloroplastSequence AnalysisAdd
    BLAST
    Chaini72 – 327256Probable 6-phosphogluconolactonase 3, chloroplasticPRO_0000288678Add
    BLAST

    Structurei

    3D structure databases

    ProteinModelPortaliQ6Z9C3.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Keywords - Domaini

    Transit peptide

    Phylogenomic databases

    eggNOGiCOG0363.
    KOiK01057.

    Family and domain databases

    InterProiIPR005900. 6-phosphogluconolactonase_DevB.
    IPR006148. Glc/Gal-6P_isomerase.
    [Graphical view]
    PfamiPF01182. Glucosamine_iso. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR01198. pgl. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    Q6Z9C3-1 [UniParc]FASTAAdd to Basket

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    MSASAAVSST CAAASSTTSR RSSSSPASRV QATPRRSLPS RLVASRTSPR    50
    SPVVPPVYAT ASPGGAGGTT AAAARKKLLI FDAEEYLAES LAKYTARLSG 100
    EAVAERGAFT VALSGGSLIK ALRKLTESPY LEAVEWSKWH VFWVDERVVP 150
    KDHADSNYKL AMDGLLSKVP IPASQIYAIN DTLSAEGAAD EYETCLKQLV 200
    NDGVVAISEV TGFPKLDLML LGMGPDGHVA SLFPGHPVVN ENLKWVSYIK 250
    DSPKPPPERI TFTFPLVNSS AHIALVVTGA GKAGAVHKAF SDKQSSSDLL 300
    PVEMVSQQEG VLTWFTDKPA VSMLSSI 327
    Length:327
    Mass (Da):34,587
    Last modified:July 5, 2004 - v1
    Checksum:i75CB55D43C5D76C6
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP004704 Genomic DNA. Translation: BAD09931.1.
    AP008214 Genomic DNA. Translation: BAF24340.1.
    CM000145 Genomic DNA. No translation available.
    AK109374 mRNA. No translation available.
    RefSeqiNP_001062426.1. NM_001068961.1.
    UniGeneiOs.6176.

    Genome annotation databases

    EnsemblPlantsiOS08T0547100-02; OS08T0547100-02; OS08G0547100.
    OS08T0547100-03; OS08T0547100-03; OS08G0547100.
    GeneIDi4346232.
    KEGGiosa:4346232.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP004704 Genomic DNA. Translation: BAD09931.1 .
    AP008214 Genomic DNA. Translation: BAF24340.1 .
    CM000145 Genomic DNA. No translation available.
    AK109374 mRNA. No translation available.
    RefSeqi NP_001062426.1. NM_001068961.1.
    UniGenei Os.6176.

    3D structure databases

    ProteinModelPortali Q6Z9C3.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi OS08T0547100-02 ; OS08T0547100-02 ; OS08G0547100 .
    OS08T0547100-03 ; OS08T0547100-03 ; OS08G0547100 .
    GeneIDi 4346232.
    KEGGi osa:4346232.

    Organism-specific databases

    Gramenei Q6Z9C3.

    Phylogenomic databases

    eggNOGi COG0363.
    KOi K01057.

    Enzyme and pathway databases

    UniPathwayi UPA00115 ; UER00409 .

    Family and domain databases

    InterProi IPR005900. 6-phosphogluconolactonase_DevB.
    IPR006148. Glc/Gal-6P_isomerase.
    [Graphical view ]
    Pfami PF01182. Glucosamine_iso. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR01198. pgl. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    2. "The rice annotation project database (RAP-DB): 2008 update."
      The rice annotation project (RAP)
      Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENOME REANNOTATION.
      Strain: cv. Nipponbare.
    3. "The genomes of Oryza sativa: a history of duplications."
      Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.
      , Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.
      PLoS Biol. 3:266-281(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    4. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
      The rice full-length cDNA consortium
      Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Strain: cv. Nipponbare.

    Entry informationi

    Entry namei6PGL3_ORYSJ
    AccessioniPrimary (citable) accession number: Q6Z9C3
    Secondary accession number(s): A3BVG6
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: May 29, 2007
    Last sequence update: July 5, 2004
    Last modified: October 1, 2014
    This is version 63 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. PATHWAY comments
      Index of metabolic and biosynthesis pathways
    2. Oryza sativa (rice)
      Index of Oryza sativa entries and their corresponding gene designations
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3