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Protein

Ribosomal protein L37

Gene

Os02g0111700

Organism
Oryza sativa subsp. japonica (Rice)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

Binds to the 23S rRNA.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal proteinUniRule annotationImported

Keywords - Ligandi

Metal-bindingUniRule annotation, RNA-binding, rRNA-bindingUniRule annotation, ZincUniRule annotation

Enzyme and pathway databases

ReactomeiR-OSA-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-OSA-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-OSA-72689. Formation of a pool of free 40S subunits.
R-OSA-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-OSA-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-OSA-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Names & Taxonomyi

Protein namesi
Recommended name:
Ribosomal protein L37UniRule annotation
Gene namesi
Name:Os02g0111700Imported
Ordered Locus Names:Os02g0111700Imported
ORF Names:OsJ_05070Imported, OSNPB_020111700Imported, P0501G04.27Imported
OrganismiOryza sativa subsp. japonica (Rice)Imported
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryza
Proteomesi
  • UP000059680 Componenti: Chromosome 2

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi39947.LOC_Os02g02130.1.

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L37e family.UniRule annotation

Phylogenomic databases

eggNOGiKOG3475. Eukaryota.
COG2126. LUCA.
OMAiKKRCAGC.
OrthoDBiEOG09360VPE.

Family and domain databases

Gene3Di2.20.25.30. 1 hit.
HAMAPiMF_00547. Ribosomal_L37e. 1 hit.
InterProiIPR011331. Ribosomal_L37ae/L37e.
IPR001569. Ribosomal_L37e.
IPR018267. Ribosomal_L37e_CS.
IPR011332. Ribosomal_zn-bd.
[Graphical view]
PfamiPF01907. Ribosomal_L37e. 1 hit.
[Graphical view]
ProDomiPD005132. Ribosomal_L37e. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF57829. SSF57829. 1 hit.
PROSITEiPS01077. RIBOSOMAL_L37E. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q6Z8Y5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGKGTGSFGK RRNKTHTLCV RCGRRSFHLQ KSTCSSCGYP AARIRKYNWS
60 70 80 90
VKAIRRKTTG TGRMRYMRHV PRRFKSNFRE GTEATPRKRA AAAN
Length:94
Mass (Da):10,795
Last modified:July 5, 2004 - v1
Checksum:i0F203335273064BF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP004752 Genomic DNA. Translation: BAD07846.1.
AP008208 Genomic DNA. Translation: BAF07569.1.
AK058280 mRNA. Translation: BAG86645.1.
AP014958 Genomic DNA. Translation: BAS76621.1.
CM000139 Genomic DNA. Translation: EAZ21468.1.
RefSeqiXP_015626988.1. XM_015771502.1.
UniGeneiOs.24388.
Os.74805.

Genome annotation databases

EnsemblPlantsiOS02T0111700-01; OS02T0111700-01; OS02G0111700.
GeneIDi4328048.
GrameneiOS02T0111700-01; OS02T0111700-01; OS02G0111700.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP004752 Genomic DNA. Translation: BAD07846.1.
AP008208 Genomic DNA. Translation: BAF07569.1.
AK058280 mRNA. Translation: BAG86645.1.
AP014958 Genomic DNA. Translation: BAS76621.1.
CM000139 Genomic DNA. Translation: EAZ21468.1.
RefSeqiXP_015626988.1. XM_015771502.1.
UniGeneiOs.24388.
Os.74805.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi39947.LOC_Os02g02130.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiOS02T0111700-01; OS02T0111700-01; OS02G0111700.
GeneIDi4328048.
GrameneiOS02T0111700-01; OS02T0111700-01; OS02G0111700.

Phylogenomic databases

eggNOGiKOG3475. Eukaryota.
COG2126. LUCA.
OMAiKKRCAGC.
OrthoDBiEOG09360VPE.

Enzyme and pathway databases

ReactomeiR-OSA-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-OSA-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-OSA-72689. Formation of a pool of free 40S subunits.
R-OSA-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-OSA-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-OSA-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Family and domain databases

Gene3Di2.20.25.30. 1 hit.
HAMAPiMF_00547. Ribosomal_L37e. 1 hit.
InterProiIPR011331. Ribosomal_L37ae/L37e.
IPR001569. Ribosomal_L37e.
IPR018267. Ribosomal_L37e_CS.
IPR011332. Ribosomal_zn-bd.
[Graphical view]
PfamiPF01907. Ribosomal_L37e. 1 hit.
[Graphical view]
ProDomiPD005132. Ribosomal_L37e. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF57829. SSF57829. 1 hit.
PROSITEiPS01077. RIBOSOMAL_L37E. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ6Z8Y5_ORYSJ
AccessioniPrimary (citable) accession number: Q6Z8Y5
Entry historyi
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: September 7, 2016
This is version 111 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.