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Protein

Putative laccase-9

Gene

LAC9

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Protein inferred from homologyi

Functioni

Lignin degradation and detoxification of lignin-derived products.By similarity

Catalytic activityi

4 benzenediol + O2 = 4 benzosemiquinone + 2 H2O.

Cofactori

Cu cationBy similarityNote: Binds 4 Cu cations per monomer.By similarity

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi86 – 861Copper 1By similarity
Metal bindingi88 – 881Copper 2By similarity
Metal bindingi131 – 1311Copper 2By similarity
Metal bindingi133 – 1331Copper 3By similarity
Metal bindingi480 – 4801Copper 4By similarity
Metal bindingi483 – 4831Copper 1By similarity
Metal bindingi485 – 4851Copper 3By similarity
Metal bindingi542 – 5421Copper 3By similarity
Metal bindingi543 – 5431Copper 4By similarity
Metal bindingi544 – 5441Copper 2By similarity
Metal bindingi548 – 5481Copper 4By similarity
Metal bindingi553 – 5531Copper 4By similarity

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Oxidoreductase

Keywords - Biological processi

Lignin degradation

Keywords - Ligandi

Copper, Metal-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Putative laccase-9 (EC:1.10.3.2)
Alternative name(s):
Benzenediol:oxygen oxidoreductase 9
Diphenol oxidase 9
Urishiol oxidase 9
Gene namesi
Name:LAC9
Ordered Locus Names:Os02g0749700, LOC_Os02g51440
ORF Names:OsJ_008109, P0431B06.7
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryza
ProteomesiUP000000763 Componenti: Chromosome 2

Organism-specific databases

GrameneiQ6Z8L2.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Apoplast, Secreted

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2727Sequence AnalysisAdd
BLAST
Chaini28 – 579552Putative laccase-9PRO_0000291894Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Glycosylationi41 – 411N-linked (GlcNAc...)Sequence Analysis
Glycosylationi82 – 821N-linked (GlcNAc...)Sequence Analysis
Glycosylationi114 – 1141N-linked (GlcNAc...)Sequence Analysis
Glycosylationi307 – 3071N-linked (GlcNAc...)Sequence Analysis
Glycosylationi405 – 4051N-linked (GlcNAc...)Sequence Analysis
Glycosylationi446 – 4461N-linked (GlcNAc...)Sequence Analysis
Glycosylationi496 – 4961N-linked (GlcNAc...)Sequence Analysis

Keywords - PTMi

Glycoprotein

Interactioni

Protein-protein interaction databases

STRINGi39947.LOC_Os02g51440.1.

Structurei

3D structure databases

ProteinModelPortaliQ6Z8L2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini36 – 152117Plastocyanin-like 1Add
BLAST
Domaini162 – 319158Plastocyanin-like 2Add
BLAST
Domaini436 – 563128Plastocyanin-like 3Add
BLAST

Sequence similaritiesi

Belongs to the multicopper oxidase family.Curated
Contains 3 plastocyanin-like domains.Curated

Keywords - Domaini

Repeat, Signal

Phylogenomic databases

eggNOGiCOG2132.
HOGENOMiHOG000241916.
InParanoidiQ6Z8L2.
OMAiDENAAMA.

Family and domain databases

Gene3Di2.60.40.420. 3 hits.
InterProiIPR001117. Cu-oxidase.
IPR011706. Cu-oxidase_2.
IPR011707. Cu-oxidase_3.
IPR002355. Cu_oxidase_Cu_BS.
IPR008972. Cupredoxin.
IPR017761. Laccase.
[Graphical view]
PfamiPF00394. Cu-oxidase. 1 hit.
PF07731. Cu-oxidase_2. 1 hit.
PF07732. Cu-oxidase_3. 1 hit.
[Graphical view]
SUPFAMiSSF49503. SSF49503. 3 hits.
TIGRFAMsiTIGR03389. laccase. 1 hit.
PROSITEiPS00079. MULTICOPPER_OXIDASE1. 1 hit.
PS00080. MULTICOPPER_OXIDASE2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q6Z8L2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGTAKLPALL WLLAGVVLAL AVNPAHGAKT RHYDFFITET NYTRLCHEKS
60 70 80 90 100
ILTVNGQFPG PTIYARKGDL VIVNVHNNGN KNITIHWHGV DQPRNPWSDG
110 120 130 140 150
PEFITQCPIR PGGNFTYQVI LSEEEGTLWW HAHSDFDRAT VHGAIVIHPK
160 170 180 190 200
RGTTFPFKKP DKEIPVILGE WWNDDIEHVL DKAQLLGGDV DPSNANTINA
210 220 230 240 250
QPGDMFPCSR DDTFKVAVQQ GNTYLLRIIN AGLTNDMFFA IAGHRLTVVG
260 270 280 290 300
IDARYTKPLT VDYIMIAPGQ TMDVLLEAKR TLGSNSRYYM AARTFITLPL
310 320 330 340 350
DTIPFNNSTA TAIVEYTDSV TARPVGPPEF PVQLPAIKDE NAAMAFVTQL
360 370 380 390 400
RSLGNQEHPV HVPTHVDEHM LIDIDINVLP CDPTNMAEKC KEGPQGNRFA
410 420 430 440 450
ASLNNVSFQS PAIDVLDAYY YSSGHGVYEE DFPNKPTAFV DPPVNNGSGP
460 470 480 490 500
LMTKRGTKVK VLEYGTVVEV VFHDLSSENH PMHLHGFAFY VVGRGNGTFD
510 520 530 540 550
ESRDPATYNL VDPPFQNTVS VPRSGWAAIR FRADNPGVWF MHCHFDRHVV
560 570
WGMDTVFIVK DGKTPQAQML PRPPNMPQC
Length:579
Mass (Da):64,371
Last modified:July 5, 2004 - v1
Checksum:i68CE38C42525296C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP004774 Genomic DNA. Translation: BAD15631.1.
CM000139 Genomic DNA. Translation: EAZ24626.1.

Genome annotation databases

EnsemblPlantsiOS02T0749700-00; OS02T0749700-00; OS02G0749700.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP004774 Genomic DNA. Translation: BAD15631.1.
CM000139 Genomic DNA. Translation: EAZ24626.1.

3D structure databases

ProteinModelPortaliQ6Z8L2.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi39947.LOC_Os02g51440.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiOS02T0749700-00; OS02T0749700-00; OS02G0749700.

Organism-specific databases

GrameneiQ6Z8L2.

Phylogenomic databases

eggNOGiCOG2132.
HOGENOMiHOG000241916.
InParanoidiQ6Z8L2.
OMAiDENAAMA.

Family and domain databases

Gene3Di2.60.40.420. 3 hits.
InterProiIPR001117. Cu-oxidase.
IPR011706. Cu-oxidase_2.
IPR011707. Cu-oxidase_3.
IPR002355. Cu_oxidase_Cu_BS.
IPR008972. Cupredoxin.
IPR017761. Laccase.
[Graphical view]
PfamiPF00394. Cu-oxidase. 1 hit.
PF07731. Cu-oxidase_2. 1 hit.
PF07732. Cu-oxidase_3. 1 hit.
[Graphical view]
SUPFAMiSSF49503. SSF49503. 3 hits.
TIGRFAMsiTIGR03389. laccase. 1 hit.
PROSITEiPS00079. MULTICOPPER_OXIDASE1. 1 hit.
PS00080. MULTICOPPER_OXIDASE2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  2. "The genomes of Oryza sativa: a history of duplications."
    Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.
    , Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.
    PLoS Biol. 3:266-281(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.

Entry informationi

Entry nameiLAC9_ORYSJ
AccessioniPrimary (citable) accession number: Q6Z8L2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 26, 2007
Last sequence update: July 5, 2004
Last modified: June 24, 2015
This is version 72 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.