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Q6Z8B9

- P2C12_ORYSJ

UniProt

Q6Z8B9 - P2C12_ORYSJ

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Protein

Probable protein phosphatase 2C 12

Gene

Os02g0224100

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli

Functioni

Catalytic activityi

[a protein]-serine/threonine phosphate + H2O = [a protein]-serine/threonine + phosphate.

Cofactori

Binds 2 magnesium or manganese ions per subunit.By similarity

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi77 – 771Manganese 1By similarity
Metal bindingi77 – 771Manganese 2By similarity
Metal bindingi78 – 781Manganese 1; via carbonyl oxygenBy similarity
Metal bindingi301 – 3011Manganese 2By similarity
Metal bindingi347 – 3471Manganese 2By similarity

GO - Molecular functioni

  1. metal ion binding Source: UniProtKB-KW
  2. phosphoprotein phosphatase activity Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Hydrolase, Protein phosphatase

Keywords - Ligandi

Magnesium, Manganese, Metal-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Probable protein phosphatase 2C 12 (EC:3.1.3.16)
Short name:
OsPP2C12
Gene namesi
Ordered Locus Names:Os02g0224100, LOC_Os02g13100
ORF Names:OsJ_005771, P0470A03.13-1
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
ProteomesiUP000000763: Chromosome 2

Organism-specific databases

GrameneiQ6Z8B9.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 389389Probable protein phosphatase 2C 12PRO_0000363258Add
BLAST

Expressioni

Gene expression databases

ExpressionAtlasiQ6Z8B9. baseline.

Structurei

3D structure databases

ProteinModelPortaliQ6Z8B9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini41 – 342302PP2C-likeAdd
BLAST

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi364 – 37512Ala-richAdd
BLAST

Sequence similaritiesi

Belongs to the PP2C family.Curated
Contains 1 PP2C-like domain.Curated

Phylogenomic databases

eggNOGiCOG0631.
HOGENOMiHOG000233897.
InParanoidiQ6Z8B9.
OMAiSAVCLFL.

Family and domain databases

Gene3Di3.60.40.10. 1 hit.
InterProiIPR001932. PP2C-like_dom.
IPR015655. Protein_Pase_2C.
[Graphical view]
PANTHERiPTHR13832. PTHR13832. 1 hit.
PfamiPF00481. PP2C. 1 hit.
[Graphical view]
SMARTiSM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
[Graphical view]
SUPFAMiSSF81606. SSF81606. 2 hits.

Sequencei

Sequence statusi: Complete.

Q6Z8B9-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MGICASSEQL EHVHETDESI VYVKDEQGRG GRGVESGGAR KVASLFSQRG
60 70 80 90 100
KKGPNQDSVI LCQGFGMEDG VFCGVFDGHG RCGQFISKLV RDYLPFMILS
110 120 130 140 150
HRNALLLADA AADDDDDAAF SDDAAASSSA DSSGNSSPQP SASASAQMLE
160 170 180 190 200
EWRQACASAF AAMDGELKLQ PNLDCAFSGT TAVCAIKQGR DLIIANLGDS
210 220 230 240 250
RAVLATMSDT GYLQAVQLTV DHKPSVPEEA ARIKRSGGRV FGLKDEPGVM
260 270 280 290 300
RVWLPGENSP GLAMARSLGD MRLKRHGVIP APEVTSRRVT GADLFMVLAT
310 320 330 340 350
DGVWDVLSNE EVVSIVCATP RKQHASKAVV EAAVQRWRAK FPTSRVDDCS
360 370 380
AVCLFLHDHT LGTAAAASAA AAAAARKARR ASTATPPAS
Length:389
Mass (Da):41,006
Last modified:July 5, 2004 - v1
Checksum:iE7AEC17AFE30F901
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP004779 Genomic DNA. Translation: BAD17061.1.
AP008208 Genomic DNA. Translation: BAF08246.1.
CM000139 Genomic DNA. Translation: EAZ22288.1.
AK067205 mRNA. Translation: BAG90314.1.
RefSeqiNP_001046332.1. NM_001052867.1.
UniGeneiOs.49561.

Genome annotation databases

EnsemblPlantsiOS02T0224100-01; OS02T0224100-01; OS02G0224100.
GeneIDi4328768.
KEGGiosa:4328768.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP004779 Genomic DNA. Translation: BAD17061.1 .
AP008208 Genomic DNA. Translation: BAF08246.1 .
CM000139 Genomic DNA. Translation: EAZ22288.1 .
AK067205 mRNA. Translation: BAG90314.1 .
RefSeqi NP_001046332.1. NM_001052867.1.
UniGenei Os.49561.

3D structure databases

ProteinModelPortali Q6Z8B9.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi OS02T0224100-01 ; OS02T0224100-01 ; OS02G0224100 .
GeneIDi 4328768.
KEGGi osa:4328768.

Organism-specific databases

Gramenei Q6Z8B9.

Phylogenomic databases

eggNOGi COG0631.
HOGENOMi HOG000233897.
InParanoidi Q6Z8B9.
OMAi SAVCLFL.

Gene expression databases

ExpressionAtlasi Q6Z8B9. baseline.

Family and domain databases

Gene3Di 3.60.40.10. 1 hit.
InterProi IPR001932. PP2C-like_dom.
IPR015655. Protein_Pase_2C.
[Graphical view ]
PANTHERi PTHR13832. PTHR13832. 1 hit.
Pfami PF00481. PP2C. 1 hit.
[Graphical view ]
SMARTi SM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
[Graphical view ]
SUPFAMi SSF81606. SSF81606. 2 hits.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  2. "The rice annotation project database (RAP-DB): 2008 update."
    The rice annotation project (RAP)
    Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: cv. Nipponbare.
  3. "The genomes of Oryza sativa: a history of duplications."
    Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.
    , Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.
    PLoS Biol. 3:266-281(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  4. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
    The rice full-length cDNA consortium
    Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Nipponbare.
  5. "Genome-wide and expression analysis of protein phosphatase 2C in rice and Arabidopsis."
    Xue T., Wang D., Zhang S., Ehlting J., Ni F., Jacab S., Zheng C., Zhong Y.
    BMC Genomics 9:550-550(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENE FAMILY, NOMENCLATURE.

Entry informationi

Entry nameiP2C12_ORYSJ
AccessioniPrimary (citable) accession number: Q6Z8B9
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 10, 2009
Last sequence update: July 5, 2004
Last modified: October 29, 2014
This is version 63 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3