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Q6Z8B9 (P2C12_ORYSJ) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 60. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Probable protein phosphatase 2C 12

Short name=OsPP2C12
EC=3.1.3.16
Gene names
Ordered Locus Names:Os02g0224100, LOC_Os02g13100
ORF Names:OsJ_005771, P0470A03.13-1
OrganismOryza sativa subsp. japonica (Rice) [Reference proteome]
Taxonomic identifier39947 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza

Protein attributes

Sequence length389 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Catalytic activity

[a protein]-serine/threonine phosphate + H2O = [a protein]-serine/threonine + phosphate.

Cofactor

Binds 2 magnesium or manganese ions per subunit By similarity.

Sequence similarities

Belongs to the PP2C family.

Contains 1 PP2C-like domain.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 389389Probable protein phosphatase 2C 12
PRO_0000363258

Regions

Domain41 – 342302PP2C-like
Compositional bias364 – 37512Ala-rich

Sites

Metal binding771Manganese 1 By similarity
Metal binding771Manganese 2 By similarity
Metal binding781Manganese 1; via carbonyl oxygen By similarity
Metal binding3011Manganese 2 By similarity
Metal binding3471Manganese 2 By similarity

Sequences

Sequence LengthMass (Da)Tools
Q6Z8B9 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: E7AEC17AFE30F901

FASTA38941,006
        10         20         30         40         50         60 
MGICASSEQL EHVHETDESI VYVKDEQGRG GRGVESGGAR KVASLFSQRG KKGPNQDSVI 

        70         80         90        100        110        120 
LCQGFGMEDG VFCGVFDGHG RCGQFISKLV RDYLPFMILS HRNALLLADA AADDDDDAAF 

       130        140        150        160        170        180 
SDDAAASSSA DSSGNSSPQP SASASAQMLE EWRQACASAF AAMDGELKLQ PNLDCAFSGT 

       190        200        210        220        230        240 
TAVCAIKQGR DLIIANLGDS RAVLATMSDT GYLQAVQLTV DHKPSVPEEA ARIKRSGGRV 

       250        260        270        280        290        300 
FGLKDEPGVM RVWLPGENSP GLAMARSLGD MRLKRHGVIP APEVTSRRVT GADLFMVLAT 

       310        320        330        340        350        360 
DGVWDVLSNE EVVSIVCATP RKQHASKAVV EAAVQRWRAK FPTSRVDDCS AVCLFLHDHT 

       370        380 
LGTAAAASAA AAAAARKARR ASTATPPAS 

« Hide

References

« Hide 'large scale' references
[1]"The map-based sequence of the rice genome."
International rice genome sequencing project (IRGSP)
Nature 436:793-800(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nipponbare.
[2]"The rice annotation project database (RAP-DB): 2008 update."
The rice annotation project (RAP)
Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: GENOME REANNOTATION.
Strain: cv. Nipponbare.
[3]"The genomes of Oryza sativa: a history of duplications."
Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L. expand/collapse author list , Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.
PLoS Biol. 3:266-281(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nipponbare.
[4]"Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
The rice full-length cDNA consortium
Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: cv. Nipponbare.
[5]"Genome-wide and expression analysis of protein phosphatase 2C in rice and Arabidopsis."
Xue T., Wang D., Zhang S., Ehlting J., Ni F., Jacab S., Zheng C., Zhong Y.
BMC Genomics 9:550-550(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: GENE FAMILY, NOMENCLATURE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP004779 Genomic DNA. Translation: BAD17061.1.
AP008208 Genomic DNA. Translation: BAF08246.1.
CM000139 Genomic DNA. Translation: EAZ22288.1.
AK067205 mRNA. Translation: BAG90314.1.
RefSeqNP_001046332.1. NM_001052867.1.
UniGeneOs.49561.

3D structure databases

ProteinModelPortalQ6Z8B9.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsOS02T0224100-01; OS02T0224100-01; OS02G0224100.
GeneID4328768.
KEGGosa:4328768.

Organism-specific databases

GrameneQ6Z8B9.

Phylogenomic databases

eggNOGCOG0631.
HOGENOMHOG000233897.
OMASAVCLFL.
ProtClustDBCLSN2692578.

Family and domain databases

Gene3D3.60.40.10. 1 hit.
InterProIPR001932. PP2C-like_dom.
IPR015655. Protein_Pase_2C.
[Graphical view]
PANTHERPTHR13832. PTHR13832. 1 hit.
PfamPF00481. PP2C. 1 hit.
[Graphical view]
SMARTSM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
[Graphical view]
SUPFAMSSF81606. SSF81606. 2 hits.
ProtoNetSearch...

Entry information

Entry nameP2C12_ORYSJ
AccessionPrimary (citable) accession number: Q6Z8B9
Entry history
Integrated into UniProtKB/Swiss-Prot: February 10, 2009
Last sequence update: July 5, 2004
Last modified: April 16, 2014
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Oryza sativa (rice)

Index of Oryza sativa entries and their corresponding gene designations