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Q6Z8B9

- P2C12_ORYSJ

UniProt

Q6Z8B9 - P2C12_ORYSJ

Protein

Probable protein phosphatase 2C 12

Gene

Os02g0224100

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 62 (01 Oct 2014)
      Sequence version 1 (05 Jul 2004)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    [a protein]-serine/threonine phosphate + H2O = [a protein]-serine/threonine + phosphate.

    Cofactori

    Binds 2 magnesium or manganese ions per subunit.By similarity

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Metal bindingi77 – 771Manganese 1By similarity
    Metal bindingi77 – 771Manganese 2By similarity
    Metal bindingi78 – 781Manganese 1; via carbonyl oxygenBy similarity
    Metal bindingi301 – 3011Manganese 2By similarity
    Metal bindingi347 – 3471Manganese 2By similarity

    GO - Molecular functioni

    1. metal ion binding Source: UniProtKB-KW
    2. phosphoprotein phosphatase activity Source: UniProtKB-KW

    Keywords - Molecular functioni

    Hydrolase, Protein phosphatase

    Keywords - Ligandi

    Magnesium, Manganese, Metal-binding

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Probable protein phosphatase 2C 12 (EC:3.1.3.16)
    Short name:
    OsPP2C12
    Gene namesi
    Ordered Locus Names:Os02g0224100, LOC_Os02g13100
    ORF Names:OsJ_005771, P0470A03.13-1
    OrganismiOryza sativa subsp. japonica (Rice)
    Taxonomic identifieri39947 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
    ProteomesiUP000000763: Chromosome 2

    Organism-specific databases

    GrameneiQ6Z8B9.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 389389Probable protein phosphatase 2C 12PRO_0000363258Add
    BLAST

    Structurei

    3D structure databases

    ProteinModelPortaliQ6Z8B9.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Domaini41 – 342302PP2C-likeAdd
    BLAST

    Compositional bias

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Compositional biasi364 – 37512Ala-richAdd
    BLAST

    Sequence similaritiesi

    Belongs to the PP2C family.Curated
    Contains 1 PP2C-like domain.Curated

    Phylogenomic databases

    eggNOGiCOG0631.
    HOGENOMiHOG000233897.
    OMAiSAVCLFL.

    Family and domain databases

    Gene3Di3.60.40.10. 1 hit.
    InterProiIPR001932. PP2C-like_dom.
    IPR015655. Protein_Pase_2C.
    [Graphical view]
    PANTHERiPTHR13832. PTHR13832. 1 hit.
    PfamiPF00481. PP2C. 1 hit.
    [Graphical view]
    SMARTiSM00331. PP2C_SIG. 1 hit.
    SM00332. PP2Cc. 1 hit.
    [Graphical view]
    SUPFAMiSSF81606. SSF81606. 2 hits.

    Sequencei

    Sequence statusi: Complete.

    Q6Z8B9-1 [UniParc]FASTAAdd to Basket

    « Hide

    MGICASSEQL EHVHETDESI VYVKDEQGRG GRGVESGGAR KVASLFSQRG    50
    KKGPNQDSVI LCQGFGMEDG VFCGVFDGHG RCGQFISKLV RDYLPFMILS 100
    HRNALLLADA AADDDDDAAF SDDAAASSSA DSSGNSSPQP SASASAQMLE 150
    EWRQACASAF AAMDGELKLQ PNLDCAFSGT TAVCAIKQGR DLIIANLGDS 200
    RAVLATMSDT GYLQAVQLTV DHKPSVPEEA ARIKRSGGRV FGLKDEPGVM 250
    RVWLPGENSP GLAMARSLGD MRLKRHGVIP APEVTSRRVT GADLFMVLAT 300
    DGVWDVLSNE EVVSIVCATP RKQHASKAVV EAAVQRWRAK FPTSRVDDCS 350
    AVCLFLHDHT LGTAAAASAA AAAAARKARR ASTATPPAS 389
    Length:389
    Mass (Da):41,006
    Last modified:July 5, 2004 - v1
    Checksum:iE7AEC17AFE30F901
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP004779 Genomic DNA. Translation: BAD17061.1.
    AP008208 Genomic DNA. Translation: BAF08246.1.
    CM000139 Genomic DNA. Translation: EAZ22288.1.
    AK067205 mRNA. Translation: BAG90314.1.
    RefSeqiNP_001046332.1. NM_001052867.1.
    UniGeneiOs.49561.

    Genome annotation databases

    EnsemblPlantsiOS02T0224100-01; OS02T0224100-01; OS02G0224100.
    GeneIDi4328768.
    KEGGiosa:4328768.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP004779 Genomic DNA. Translation: BAD17061.1 .
    AP008208 Genomic DNA. Translation: BAF08246.1 .
    CM000139 Genomic DNA. Translation: EAZ22288.1 .
    AK067205 mRNA. Translation: BAG90314.1 .
    RefSeqi NP_001046332.1. NM_001052867.1.
    UniGenei Os.49561.

    3D structure databases

    ProteinModelPortali Q6Z8B9.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi OS02T0224100-01 ; OS02T0224100-01 ; OS02G0224100 .
    GeneIDi 4328768.
    KEGGi osa:4328768.

    Organism-specific databases

    Gramenei Q6Z8B9.

    Phylogenomic databases

    eggNOGi COG0631.
    HOGENOMi HOG000233897.
    OMAi SAVCLFL.

    Family and domain databases

    Gene3Di 3.60.40.10. 1 hit.
    InterProi IPR001932. PP2C-like_dom.
    IPR015655. Protein_Pase_2C.
    [Graphical view ]
    PANTHERi PTHR13832. PTHR13832. 1 hit.
    Pfami PF00481. PP2C. 1 hit.
    [Graphical view ]
    SMARTi SM00331. PP2C_SIG. 1 hit.
    SM00332. PP2Cc. 1 hit.
    [Graphical view ]
    SUPFAMi SSF81606. SSF81606. 2 hits.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    2. "The rice annotation project database (RAP-DB): 2008 update."
      The rice annotation project (RAP)
      Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENOME REANNOTATION.
      Strain: cv. Nipponbare.
    3. "The genomes of Oryza sativa: a history of duplications."
      Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.
      , Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.
      PLoS Biol. 3:266-281(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    4. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
      The rice full-length cDNA consortium
      Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Strain: cv. Nipponbare.
    5. "Genome-wide and expression analysis of protein phosphatase 2C in rice and Arabidopsis."
      Xue T., Wang D., Zhang S., Ehlting J., Ni F., Jacab S., Zheng C., Zhong Y.
      BMC Genomics 9:550-550(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENE FAMILY, NOMENCLATURE.

    Entry informationi

    Entry nameiP2C12_ORYSJ
    AccessioniPrimary (citable) accession number: Q6Z8B9
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: February 10, 2009
    Last sequence update: July 5, 2004
    Last modified: October 1, 2014
    This is version 62 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Oryza sativa (rice)
      Index of Oryza sativa entries and their corresponding gene designations
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3