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Reviewed, UniProtKB/Swiss-Prot Q6Z715 (GUN4_ORYSJ)

Last modified December 15, 2009. Version 38. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    Endoglucanase 4
    EC=3.2.1.4
Alternative name(s):
    Endo-1,4-beta glucanase 4
    OsGLU14
    OsCel9F
Gene names
Name: GLU14
Ordered Locus Names: Os02g0123700, LOC_Os02g03120
ORF Names: P0575F10.17
OrganismOryza sativa subsp. japonica (Rice)
Taxonomic identifier39947 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza

Protein attributes

Sequence length503 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at transcript level.

General annotation (Comments)

Catalytic activity

Endohydrolysis of (1->4)-beta-D-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.

Subcellular location

Secreted By similarity.

Induction

By auxin in roots. Ref.4

Sequence similarities

Belongs to the glycosyl hydrolase 9 (cellulase E) family.

Ontologies

Keywords
   Biological processCarbohydrate metabolism
Cell wall biogenesis/degradation
Cellulose degradation
Polysaccharide degradation
   Cellular componentSecreted
   DomainSignal
   Molecular functionGlycosidase
Hydrolase
Gene Ontology (GO)
   Biological processcellular cell wall organization

Inferred from electronic annotation. Source: UniProtKB-KW

cellulose catabolic process

Inferred from electronic annotation. Source: UniProtKB-KW

   Cellular componentextracellular region

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular functioncellulase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2222 Potential
Chain23 – 503481Endoglucanase 4
PRO_0000249281

Sites

Active site4181 By similarity
Active site4691 By similarity
Active site4781 By similarity

Experimental info

Sequence conflict391Q → R in AK106726. Ref.3

Sequences

Sequence LengthMass (Da)Tools
Q6Z715-1 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: E9EA970F02FD62C0

FASTA50353,899
        10         20         30         40         50         60 
MSRACLLLVV AAVCLAGREA AAFNYADALD KAILFFEAQR SGKLPPGQRV AWRADSGLSD 

        70         80         90        100        110        120 
GSADGVDLAG GYYDAGDNVK FGLPMAFTVT MLSWSVIEFG DMMPARRSSF LGGIFGGGGV 

       130        140        150        160        170        180 
AQLDNARAAV RWGADYLLKA ATATPDTLYV QVADPYQDHR CWERPEDMDT PRSVYKVTPQ 

       190        200        210        220        230        240 
SPGSDVAGET AAALAAASIV FRVSDPSYSA KLLDAAQLVF DFADKYRGSY SDSLSSVVCP 

       250        260        270        280        290        300 
FYCSHSYHDE LLWAASWLHL ASPEKKDVYL SYIGSNGHAL GAEQDDFTFS WDDKRVATKG 

       310        320        330        340        350        360 
FLQSRADGLQ LYKAHTDNYI CSLVPGANGF QSQYTPGGLL FKEGDSNMQY VTSTAFLLLT 

       370        380        390        400        410        420 
YAKYLSSSAA TVSCGSTAVS PSTLISLAKK QVDYILGANP AGMSYMVGFG ARYPRHVHHR 

       430        440        450        460        470        480 
GASMPSVRDH PARIGCDEGF RYLHSPEPDR NLLAGAVVGG PDAGDAFADG RDNYAQAEPS 

       490        500 
TYTNAPLVGA LAFFAGAHKI FTP 

« Hide

References

« Hide 'large scale' references
[1]"The map-based sequence of the rice genome."
International rice genome sequencing project (IRGSP)
Nature 436:793-800(2005) [PubMed: 16100779] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nipponbare.
[2]"Curated genome annotation of Oryza sativa ssp. japonica and comparative genome analysis with Arabidopsis thaliana."
The rice annotation project (RAP)
Genome Res. 17:175-183(2007) [PubMed: 17210932] [Abstract]
Cited for: GENOME REANNOTATION.
Strain: cv. Nipponbare.
[3]"Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
The rice full-length cDNA consortium
Science 301:376-379(2003) [PubMed: 12869764] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: cv. Nipponbare.
[4]"Carbohydrate-binding module of a rice endo-beta-1,4-glycanase, OsCel9A, expressed in auxin-induced lateral root primordia, is post-translationally truncated."
Yoshida K., Imaizumi N., Kaneko S., Kawagoe Y., Tagiri A., Tanaka H., Nishitani K., Komae K.
Plant Cell Physiol. 47:1555-1571(2006) [PubMed: 17056619] [Abstract]
Cited for: INDUCTION.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP004885 Genomic DNA. Translation: BAD07956.1.
AP008208 Genomic DNA. Translation: BAF07651.1.
AK106726 mRNA. No translation available.
RefSeqNP_001045737.1.
UniGeneOs.54770

3D structure databases

HSSPHSSP built from PDB template 1TF4 based on UniProtKB P26221.
ModBaseSearch...

Protein family/group databases

CAZyGH9. Glycoside Hydrolase Family 9.

Genome annotation databases

GeneID4328141.
GenomeReviewsGene locus GLU14 in contig AP008208_GR.
KEGGosa:4328141.

Organism-specific databases

GrameneQ6Z715.

Phylogenomic databases

HOGENOMHBG746347.

Family and domain databases

InterProIPR008928. 6-hairpin_glycosidase-like.
IPR012341. 6hp_glycosidase.
IPR001701. Glyco_hydro_9.
IPR018221. Glyco_hydro_9_AS.
[Graphical view]
Gene3DG3DSA:1.50.10.10. CelA/Cel48F_cat. 1 hit.
PANTHERPTHR22298:SF3. Glyco_hydro_9. 1 hit.
PfamPF00759. Glyco_hydro_9. 1 hit.
[Graphical view]
PROSITEPS00592. GLYCOSYL_HYDROL_F9_1. 1 hit.
PS00698. GLYCOSYL_HYDROL_F9_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameGUN4_ORYSJ
AccessionPrimary (citable) accession number: Q6Z715
Secondary accession number(s): Q0E4D7
Entry history
Integrated into UniProtKB/Swiss-Prot: September 5, 2006
Last sequence update: July 5, 2004
Last modified: December 15, 2009
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectPPAP (Plant Proteome Annotation Project)

Relevant documents

Glycosyl hydrolases

Classification of glycosyl hydrolase families and list of entries

Oryza sativa (rice)

Index of Oryza sativa entries and their corresponding gene designations

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents