Reviewed,
UniProtKB/Swiss-Prot Q6Z715 (GUN4_ORYSJ)
Last modified
September 22, 2009.
Version 36.
History...
Clusters with 100%,
90%,
50% identity |
Documents (3) |
Third-party data |
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Names and origin
| Protein names | Recommended name: Endoglucanase 4 EC=3.2.1.4 Alternative name(s): Endo-1,4-beta glucanase 4 OsGLU14 OsCel9F | ||||||
| Gene names |
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| Organism | Oryza sativa subsp. japonica (Rice) | ||||||
| Taxonomic identifier | 39947 [NCBI] | ||||||
| Taxonomic lineage | Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › Liliopsida › Poales › Poaceae › BEP clade › Ehrhartoideae › Oryzeae › Oryza |
Protein attributes
| Sequence length | 503 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is further processed into a mature form. |
| Protein existence | Evidence at transcript level. |
General annotation (Comments)
| Catalytic activity | Endohydrolysis of (1->4)-beta-D-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans. |
| Subcellular location | Secreted By similarity. |
| Induction | By auxin in roots. Ref.4 |
| Sequence similarities | Belongs to the glycosyl hydrolase 9 (cellulase E) family. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Carbohydrate metabolism Cell wall biogenesis/degradation Cellulose degradation Polysaccharide degradation |
| Cellular component | Secreted |
| Domain | Signal |
| Molecular function | Glycosidase Hydrolase |
| Gene Ontology (GO) | |
| Biological process | cell wall organization Inferred from electronic annotation. Source: UniProtKB-KW cellulose catabolic processInferred from electronic annotation. Source: UniProtKB-KW |
| Cellular component | extracellular region Inferred from electronic annotation. Source: UniProtKB-SubCell |
| Molecular function | cellulase activity Inferred from electronic annotation. Source: EC |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Signal peptide | 1 – 22 | 22 | Potential | ||||||
| Chain | 23 – 503 | 481 | Endoglucanase 4 | PRO_0000249281 | |||||
Sites | |||||||||
| Active site | 418 | 1 | By similarity | ||||||
| Active site | 469 | 1 | By similarity | ||||||
| Active site | 478 | 1 | By similarity | ||||||
Experimental info | |||||||||
| Sequence conflict | 39 | 1 | Q → R in AK106726. Ref.3 | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "The map-based sequence of the rice genome." International rice genome sequencing project (IRGSP) Nature 436:793-800(2005) [PubMed: 16100779] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Nipponbare. |
| [2] | "Curated genome annotation of Oryza sativa ssp. japonica and comparative genome analysis with Arabidopsis thaliana." The rice annotation project (RAP) Genome Res. 17:175-183(2007) [PubMed: 17210932] [Abstract] Cited for: GENOME REANNOTATION. Strain: cv. Nipponbare. |
| [3] | "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice." The rice full-length cDNA consortium Science 301:376-379(2003) [PubMed: 12869764] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Strain: cv. Nipponbare. |
| [4] | "Carbohydrate-binding module of a rice endo-beta-1,4-glycanase, OsCel9A, expressed in auxin-induced lateral root primordia, is post-translationally truncated." Yoshida K., Imaizumi N., Kaneko S., Kawagoe Y., Tagiri A., Tanaka H., Nishitani K., Komae K. Plant Cell Physiol. 47:1555-1571(2006) [PubMed: 17056619] [Abstract] Cited for: INDUCTION. |
Cross-references
Sequence databases | |
|---|---|
| AP004885 Genomic DNA. Translation: BAD07956.1. AP008208 Genomic DNA. Translation: BAF07651.1. AK106726 mRNA. No translation available. | |
| RefSeq | NP_001045737.1. |
| UniGene | Os.54770 |
3D structure databases | |
| HSSP | HSSP built from PDB template 1K72 based on UniProtKB P37700. |
| ModBase | Search... |
Protein family/group databases | |
| CAZy | GH9. Glycoside Hydrolase Family 9. |
Genome annotation databases | |
| GeneID | 4328141. |
| GenomeReviews | Gene locus GLU14 in contig AP008208_GR. |
| KEGG | osa:4328141. |
Organism-specific databases | |
| Gramene | Q6Z715. |
Family and domain databases | |
| InterPro | IPR012341. 6hp_glycosidase. IPR001701. Glyco_hydro_9. IPR018221. Glyco_hydro_9_AS. [Graphical view] |
| Gene3D | G3DSA:1.50.10.10. CelA/Cel48F_cat. 1 hit. |
| PANTHER | PTHR22298:SF3. Glyco_hydro_9. 1 hit. |
| Pfam | PF00759. Glyco_hydro_9. 1 hit. [Graphical view] |
| PROSITE | PS00592. GLYCOSYL_HYDROL_F9_1. 1 hit. PS00698. GLYCOSYL_HYDROL_F9_2. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | GUN4_ORYSJ | ||||||||
| Accession | Primary (citable) accession number: Q6Z715 Secondary accession number(s): Q0E4D7 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | PPAP (Plant Proteome Annotation Project) | ||||||||
Relevant documents
| Glycosyl hydrolases Classification of glycosyl hydrolase families and list of entries |
| Oryza sativa (rice) Index of Oryza sativa entries and their corresponding gene designations |
| SIMILARITY comments Index of protein domains and families |

Clusters with


