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Q6Z6K4

- BGAL4_ORYSJ

UniProt

Q6Z6K4 - BGAL4_ORYSJ

Protein

Beta-galactosidase 4

Gene

Os02g0219200

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 65 (01 Oct 2014)
      Sequence version 1 (05 Jul 2004)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides.

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei194 – 1941Proton donorSequence Analysis
    Active sitei263 – 2631NucleophileSequence Analysis

    GO - Molecular functioni

    1. beta-galactosidase activity Source: UniProtKB-EC

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro

    Keywords - Molecular functioni

    Glycosidase, Hydrolase

    Protein family/group databases

    CAZyiGH35. Glycoside Hydrolase Family 35.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Beta-galactosidase 4 (EC:3.2.1.23)
    Short name:
    Lactase 4
    Gene namesi
    Ordered Locus Names:Os02g0219200, LOC_Os02g12730
    ORF Names:P0027A02.24
    OrganismiOryza sativa subsp. japonica (Rice)
    Taxonomic identifieri39947 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
    ProteomesiUP000000763: Chromosome 2

    Organism-specific databases

    GrameneiQ6Z6K4.

    Subcellular locationi

    GO - Cellular componenti

    1. apoplast Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Apoplast, Secreted

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 3535Sequence AnalysisAdd
    BLAST
    Chaini36 – 729694Beta-galactosidase 4PRO_0000294156Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi39947.LOC_Os02g12730.1.

    Structurei

    3D structure databases

    ProteinModelPortaliQ6Z6K4.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 35 family.Curated

    Keywords - Domaini

    Signal

    Phylogenomic databases

    eggNOGiCOG1874.
    OMAiVENEFGP.

    Family and domain databases

    Gene3Di2.60.120.260. 2 hits.
    3.20.20.80. 1 hit.
    InterProiIPR025300. BetaGal_jelly_roll_dom.
    IPR008979. Galactose-bd-like.
    IPR019801. Glyco_hydro_35_CS.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR001944. Glycoside_Hdrlase_35.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR23421. PTHR23421. 1 hit.
    PfamiPF13364. BetaGal_dom4_5. 1 hit.
    PF01301. Glyco_hydro_35. 1 hit.
    [Graphical view]
    PRINTSiPR00742. GLHYDRLASE35.
    SUPFAMiSSF49785. SSF49785. 2 hits.
    SSF51445. SSF51445. 1 hit.
    PROSITEiPS01182. GLYCOSYL_HYDROL_F35. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    Q6Z6K4-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAPAPTPAAA AGRRVAVLAA ALVAASLAAS VGVANAAVSY DRRSLVINGR    50
    RRILLSGSIH YPRSTPEMWP GLIQKAKDGG LDVIQTYVFW NGHEPVQGQY 100
    YFSDRYDLVR FVKLVKQAGL YVHLRIGPYV CAEWNFGGFP VWLKYVPGVS 150
    FRTDNGPFKA EMQKFVEKIV SMMKSEGLFE WQGGPIIMSQ VENEFGPMES 200
    VGGSGAKPYA NWAAKMAVGT NTGVPWVMCK QDDAPDPVIN TCNGFYCDYF 250
    SPNKNYKPSM WTEAWTGWFT SFGGGVPHRP VEDLAFAVAR FIQKGGSFVN 300
    YYMYHGGTNF GRTAGGPFIA TSYDYDAPID EFGLLRQPKW GHLRDLHRAI 350
    KQAEPVLVSA DPTIESIGSY EKAYVFKAKN GACAAFLSNY HMNTAVKVRF 400
    NGQQYNLPAW SISILPDCKT AVFNTATVKE PTLMPKMNPV VRFAWQSYSE 450
    DTNSLSDSAF TKDGLVEQLS MTWDKSDYLW YTTYVNIGTN DLRSGQSPQL 500
    TVYSAGHSMQ VFVNGKSYGS VYGGYDNPKL TYNGRVKMWQ GSNKISILSS 550
    AVGLPNVGNH FENWNVGVLG PVTLSSLNGG TKDLSHQKWT YQVGLKGETL 600
    GLHTVTGSSA VEWGGPGGYQ PLTWHKAFFN APAGNDPVAL DMGSMGKGQL 650
    WVNGHHVGRY WSYKASGGCG GCSYAGTYHE DKCRSNCGDL SQRWYHVPRS 700
    WLKPGGNLLV VLEEYGGDLA GVSLATRTT 729
    Length:729
    Mass (Da):79,996
    Last modified:July 5, 2004 - v1
    Checksum:i877E85CECA84EEEE
    GO

    Sequence cautioni

    The sequence BAF08224.1 differs from that shown. Reason: Erroneous gene model prediction.

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP004996 Genomic DNA. Translation: BAD17189.1.
    AP008208 Genomic DNA. Translation: BAF08224.1. Sequence problems.
    AK059059 mRNA. No translation available.
    RefSeqiNP_001046310.1. NM_001052845.1.
    UniGeneiOs.14358.

    Genome annotation databases

    GeneIDi4328745.
    KEGGiosa:4328745.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP004996 Genomic DNA. Translation: BAD17189.1 .
    AP008208 Genomic DNA. Translation: BAF08224.1 . Sequence problems.
    AK059059 mRNA. No translation available.
    RefSeqi NP_001046310.1. NM_001052845.1.
    UniGenei Os.14358.

    3D structure databases

    ProteinModelPortali Q6Z6K4.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 39947.LOC_Os02g12730.1.

    Protein family/group databases

    CAZyi GH35. Glycoside Hydrolase Family 35.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 4328745.
    KEGGi osa:4328745.

    Organism-specific databases

    Gramenei Q6Z6K4.

    Phylogenomic databases

    eggNOGi COG1874.
    OMAi VENEFGP.

    Family and domain databases

    Gene3Di 2.60.120.260. 2 hits.
    3.20.20.80. 1 hit.
    InterProi IPR025300. BetaGal_jelly_roll_dom.
    IPR008979. Galactose-bd-like.
    IPR019801. Glyco_hydro_35_CS.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR001944. Glycoside_Hdrlase_35.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR23421. PTHR23421. 1 hit.
    Pfami PF13364. BetaGal_dom4_5. 1 hit.
    PF01301. Glyco_hydro_35. 1 hit.
    [Graphical view ]
    PRINTSi PR00742. GLHYDRLASE35.
    SUPFAMi SSF49785. SSF49785. 2 hits.
    SSF51445. SSF51445. 1 hit.
    PROSITEi PS01182. GLYCOSYL_HYDROL_F35. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    2. "The rice annotation project database (RAP-DB): 2008 update."
      The rice annotation project (RAP)
      Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENOME REANNOTATION.
      Strain: cv. Nipponbare.
    3. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
      The rice full-length cDNA consortium
      Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 230-729.
      Strain: cv. Nipponbare.

    Entry informationi

    Entry nameiBGAL4_ORYSJ
    AccessioniPrimary (citable) accession number: Q6Z6K4
    Secondary accession number(s): Q0E2R4
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: July 10, 2007
    Last sequence update: July 5, 2004
    Last modified: October 1, 2014
    This is version 65 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Glycosyl hydrolases
      Classification of glycosyl hydrolase families and list of entries
    2. Oryza sativa (rice)
      Index of Oryza sativa entries and their corresponding gene designations
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3