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Q6Z6K4 (BGAL4_ORYSJ) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 64. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Beta-galactosidase 4

Short name=Lactase 4
EC=3.2.1.23
Gene names
Ordered Locus Names:Os02g0219200, LOC_Os02g12730
ORF Names:P0027A02.24
OrganismOryza sativa subsp. japonica (Rice) [Reference proteome]
Taxonomic identifier39947 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza

Protein attributes

Sequence length729 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at transcript level

General annotation (Comments)

Catalytic activity

Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides.

Subcellular location

Secretedextracellular spaceapoplast Potential.

Sequence similarities

Belongs to the glycosyl hydrolase 35 family.

Sequence caution

The sequence BAF08224.1 differs from that shown. Reason: Erroneous gene model prediction.

Ontologies

Keywords
   Cellular componentApoplast
Secreted
   DomainSignal
   Molecular functionGlycosidase
Hydrolase
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Cellular_componentapoplast

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular_functionbeta-galactosidase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 3535 Potential
Chain36 – 729694Beta-galactosidase 4
PRO_0000294156

Sites

Active site1941Proton donor Potential
Active site2631Nucleophile Potential

Sequences

Sequence LengthMass (Da)Tools
Q6Z6K4 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: 877E85CECA84EEEE

FASTA72979,996
        10         20         30         40         50         60 
MAPAPTPAAA AGRRVAVLAA ALVAASLAAS VGVANAAVSY DRRSLVINGR RRILLSGSIH 

        70         80         90        100        110        120 
YPRSTPEMWP GLIQKAKDGG LDVIQTYVFW NGHEPVQGQY YFSDRYDLVR FVKLVKQAGL 

       130        140        150        160        170        180 
YVHLRIGPYV CAEWNFGGFP VWLKYVPGVS FRTDNGPFKA EMQKFVEKIV SMMKSEGLFE 

       190        200        210        220        230        240 
WQGGPIIMSQ VENEFGPMES VGGSGAKPYA NWAAKMAVGT NTGVPWVMCK QDDAPDPVIN 

       250        260        270        280        290        300 
TCNGFYCDYF SPNKNYKPSM WTEAWTGWFT SFGGGVPHRP VEDLAFAVAR FIQKGGSFVN 

       310        320        330        340        350        360 
YYMYHGGTNF GRTAGGPFIA TSYDYDAPID EFGLLRQPKW GHLRDLHRAI KQAEPVLVSA 

       370        380        390        400        410        420 
DPTIESIGSY EKAYVFKAKN GACAAFLSNY HMNTAVKVRF NGQQYNLPAW SISILPDCKT 

       430        440        450        460        470        480 
AVFNTATVKE PTLMPKMNPV VRFAWQSYSE DTNSLSDSAF TKDGLVEQLS MTWDKSDYLW 

       490        500        510        520        530        540 
YTTYVNIGTN DLRSGQSPQL TVYSAGHSMQ VFVNGKSYGS VYGGYDNPKL TYNGRVKMWQ 

       550        560        570        580        590        600 
GSNKISILSS AVGLPNVGNH FENWNVGVLG PVTLSSLNGG TKDLSHQKWT YQVGLKGETL 

       610        620        630        640        650        660 
GLHTVTGSSA VEWGGPGGYQ PLTWHKAFFN APAGNDPVAL DMGSMGKGQL WVNGHHVGRY 

       670        680        690        700        710        720 
WSYKASGGCG GCSYAGTYHE DKCRSNCGDL SQRWYHVPRS WLKPGGNLLV VLEEYGGDLA 


GVSLATRTT 

« Hide

References

« Hide 'large scale' references
[1]"The map-based sequence of the rice genome."
International rice genome sequencing project (IRGSP)
Nature 436:793-800(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nipponbare.
[2]"The rice annotation project database (RAP-DB): 2008 update."
The rice annotation project (RAP)
Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: GENOME REANNOTATION.
Strain: cv. Nipponbare.
[3]"Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
The rice full-length cDNA consortium
Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 230-729.
Strain: cv. Nipponbare.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP004996 Genomic DNA. Translation: BAD17189.1.
AP008208 Genomic DNA. Translation: BAF08224.1. Sequence problems.
AK059059 mRNA. No translation available.
RefSeqNP_001046310.1. NM_001052845.1.
UniGeneOs.14358.

3D structure databases

ProteinModelPortalQ6Z6K4.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING39947.LOC_Os02g12730.1.

Protein family/group databases

CAZyGH35. Glycoside Hydrolase Family 35.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4328745.
KEGGosa:4328745.

Organism-specific databases

GrameneQ6Z6K4.

Phylogenomic databases

eggNOGCOG1874.
OMAVENEFGP.

Family and domain databases

Gene3D2.60.120.260. 2 hits.
3.20.20.80. 1 hit.
InterProIPR025300. BetaGal_jelly_roll_dom.
IPR008979. Galactose-bd-like.
IPR019801. Glyco_hydro_35_CS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR001944. Glycoside_Hdrlase_35.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR23421. PTHR23421. 1 hit.
PfamPF13364. BetaGal_dom4_5. 1 hit.
PF01301. Glyco_hydro_35. 1 hit.
[Graphical view]
PRINTSPR00742. GLHYDRLASE35.
SUPFAMSSF49785. SSF49785. 2 hits.
SSF51445. SSF51445. 1 hit.
PROSITEPS01182. GLYCOSYL_HYDROL_F35. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameBGAL4_ORYSJ
AccessionPrimary (citable) accession number: Q6Z6K4
Secondary accession number(s): Q0E2R4
Entry history
Integrated into UniProtKB/Swiss-Prot: July 10, 2007
Last sequence update: July 5, 2004
Last modified: May 14, 2014
This is version 64 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Oryza sativa (rice)

Index of Oryza sativa entries and their corresponding gene designations

Glycosyl hydrolases

Classification of glycosyl hydrolase families and list of entries