Unreviewed,
UniProtKB/TrEMBL Q6Z5M3 (Q6Z5M3_ORYSJ)
Last modified
October 13, 2009.
Version 25.
History...
Clusters with 100%,
90%,
50% identity |
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Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information
Names and origin
| Protein names | Submitted name: Os02g0723200 protein EMBL BAF09884.1 Submitted name: cDNA clone:002-139-E08, full insert sequence EMBL BAG98296.1 Putative alpha galactosyltransferase EMBL BAD13026.1 | ||||
| Gene names |
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| Organism | Oryza sativa subsp. japonica (Rice) EMBL BAD13026.1 | ||||
| Taxonomic identifier | 39947 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › Liliopsida › Poales › Poaceae › BEP clade › Ehrhartoideae › Oryzeae › Oryza |
Protein attributes
| Sequence length | 447 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Evidence at transcript level. |
Ontologies
| Keywords | |
|---|---|
| Molecular function | Glycosyltransferase EMBL BAD13026.1 Transferase |
| Gene Ontology (GO) | |
| Cellular component | integral to membrane Inferred from electronic annotation. Source: InterPro |
| Molecular function | transferase activity, transferring hexosyl groups Inferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Sequences
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References
| [1] | "Oryza sativa nipponbare(GA3) genomic DNA, chromosome 2, PAC clone:P0685G12." Sasaki T., Matsumoto T., Katayose Y. Submitted (APR-2002) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. |
| [2] | "Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice." Kikuchi S., Satoh K., Nagata T., Kawagashira N., Doi K., Kishimoto N., Yazaki J., Ishikawa M., Yamada H., Ooka H., Hotta I., Kojima K., Namiki T., Ohneda E., Yahagi W., Suzuki K., Li C., Ohtsuki K. Hayashizaki Y.Science 301:376-379(2003) Cited for: NUCLEOTIDE SEQUENCE. |
| [3] | "The map-based sequence of the rice genome." International Rice Genome Sequencing Project Matsumoto T., Wu J., Kanamori H., Katayose Y., Fujisawa M., Namiki N., Mizuno H., Yamamoto K., Antonio B.A., Baba T., Sakata K., Nagamura Y., Aoki H., Arikawa K., Arita K., Bito T., Chiden Y., Fujitsuka N. Sasaki T.Nature 436:793-800(2005) Cited for: NUCLEOTIDE SEQUENCE. |
| [4] | "The Rice Annotation Project Database (RAP-DB): hub for Oryza sativa ssp. japonica genome information." Ohyanagi H., Tanaka T., Sakai H., Shigemoto Y., Yamaguchi K., Habara T., Fujii Y., Antonio B.A., Nagamura Y., Imanishi T., Ikeo K., Itoh T., Gojobori T., Sasaki T. Nucleic Acids Res. 34:D741-D744(2006) [PubMed: 16381971] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. |
| [5] | "Curated Genome Annotation of Oryza sativa ssp. japonica and Comparative Genome Analysis with Arabidopsis thaliana." The Rice Annotation Project (RAP) Itoh T., Tanaka T., Barrero R.A., Yamasaki C., Fujii Y., Hilton P.B., Antonio B.A., Aono H., Apweiler R., Bruskiewich R., Bureau T., Burr F., Costa de Oliveira A., Fuks G., Habara T., Haberer G., Han B., Harada E. Sasaki T.Genome Res. 17:175-183(2007) Cited for: NUCLEOTIDE SEQUENCE. |
| [6] | "The Rice Annotation Project Database (RAP-DB): 2008 update." The Rice Annotation Project (RAP) Tanaka T., Antonio B.A., Kikuchi S., Matsumoto T., Nagamura Y., Numa H., Sakai H., Wu J., Itoh T., Sasaki T., Aono R., Fujii Y., Habara T., Harada E., Kanno M., Kawahara Y., Kawashima H., Kubooka H. Echeverria M.Nucleic Acids Res. 36:D1028-D1033(2008) Cited for: NUCLEOTIDE SEQUENCE. |
| [7] | "Oryza sativa nipponbare(GA3) genomic DNA, chromosome 2." IRGSP(International Rice Genome Sequencing Project) Submitted (FEB-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. |
| [8] | "The Second Rice Annotation Project Meeting (RAP2)." The Rice Annotation Project (RAP) Submitted (FEB-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. |
Cross-references
Sequence databases | |
|---|---|
| AP005113 Genomic DNA. Translation: BAD13026.1. AP008208 Genomic DNA. Translation: BAF09884.1. AK108140 mRNA. Translation: BAG98296.1. | |
| RefSeq | NP_001047970.1. |
| UniGene | Os.16235 |
3D structure databases | |
| ModBase | Search... |
Protein family/group databases | |
| CAZy | GT34. Glycosyltransferase Family 34. |
Genome annotation databases | |
| GeneID | 4330569. |
| KEGG | osa:4330569. |
Organism-specific databases | |
| Gramene | Q6Z5M3. |
Family and domain databases | |
| InterPro | IPR008630. Glyco_trans_34. [Graphical view] |
| Pfam | PF05637. Glyco_transf_34. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | Q6Z5M3_ORYSJ | ||||||||
| Accession | Primary (citable) accession number: Q6Z5M3 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

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