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Protein

Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY

Gene

SPY

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at transcript leveli

Functioni

Probable O-linked N-acetylglucosamine transferase (OGT) involved in various processes such as gibberellin (GA) signaling pathway. OGTs catalyze the addition of nucleotide-activated sugars directly onto the polypeptide through O-glycosidic linkage with the hydroxyl of serine or threonine. Probably acts by adding O-linked sugars to yet unknown proteins (By similarity).By similarity

Catalytic activityi

UDP-N-acetyl-D-glucosamine + peptide = UDP + N-acetyl-beta-D-glucosaminyl-peptide.

Pathwayi: protein glycosylation

This protein is involved in the pathway protein glycosylation, which is part of Protein modification.
View all proteins of this organism that are known to be involved in the pathway protein glycosylation and in Protein modification.

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Gibberellin signaling pathway

Enzyme and pathway databases

UniPathwayiUPA00378.

Protein family/group databases

CAZyiGT41. Glycosyltransferase Family 41.

Names & Taxonomyi

Protein namesi
Recommended name:
Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY (EC:2.4.1.-)
Gene namesi
Name:SPY
Ordered Locus Names:Os08g0559300, LOC_Os08g44510
ORF Names:P0562A06.20
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryza
Proteomesi
  • UP000059680 Componenti: Chromosome 8

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 927927Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLYPRO_0000191780Add
BLAST

Proteomic databases

PaxDbiQ6YZI0.
PRIDEiQ6YZI0.

Expressioni

Gene expression databases

ExpressionAtlasiQ6YZI0. baseline and differential.
GenevisibleiQ6YZI0. OS.

Interactioni

Protein-protein interaction databases

STRINGi39947.LOC_Os08g44510.1.

Structurei

3D structure databases

ProteinModelPortaliQ6YZI0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Repeati34 – 6734TPR 1Add
BLAST
Repeati68 – 10134TPR 2Add
BLAST
Repeati102 – 13534TPR 3Add
BLAST
Repeati143 – 17634TPR 4Add
BLAST
Repeati177 – 21034TPR 5Add
BLAST
Repeati211 – 24434TPR 6Add
BLAST
Repeati252 – 28534TPR 7Add
BLAST
Repeati286 – 31934TPR 8Add
BLAST
Repeati320 – 35334TPR 9Add
BLAST
Repeati355 – 38733TPR 10Add
BLAST
Repeati388 – 42134TPR 11Add
BLAST

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni422 – 927506Catalytic regionAdd
BLAST

Sequence similaritiesi

Contains 11 TPR repeats.PROSITE-ProRule annotation

Keywords - Domaini

Repeat, TPR repeat

Phylogenomic databases

eggNOGiENOG410IRRE. Eukaryota.
COG3914. LUCA.
HOGENOMiHOG000030819.
InParanoidiQ6YZI0.
OMAiYQAHREW.
OrthoDBiEOG093601FF.

Family and domain databases

Gene3Di1.25.40.10. 3 hits.
InterProiIPR029489. OGT/SEC/SPY_C.
IPR006597. Sel1-like.
IPR013026. TPR-contain_dom.
IPR011990. TPR-like_helical_dom.
IPR001440. TPR_1.
IPR019734. TPR_repeat.
[Graphical view]
PfamiPF13844. Glyco_transf_41. 2 hits.
PF00515. TPR_1. 5 hits.
[Graphical view]
SMARTiSM00671. SEL1. 3 hits.
SM00028. TPR. 11 hits.
[Graphical view]
SUPFAMiSSF48452. SSF48452. 3 hits.
PROSITEiPS50005. TPR. 11 hits.
PS50293. TPR_REGION. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q6YZI0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGRPGMDSSE GRESNGVVPE RNGGAVPAKQ QLDGKDTLRY ANILRSRNKF
60 70 80 90 100
AEALQLYNNV LEKDEANVEA LIGKGICLQA QSLPMQAIEC FNEAVRIDPG
110 120 130 140 150
NACALTYCGM IYKDEGHLVE AAEAYQKARN ADPSYKPAAE FLAIVLTDLG
160 170 180 190 200
TSLKLAGNTE EGIQKYCEAL EVDSHYAPAY YNLGVVYSEM MQFDLALTCY
210 220 230 240 250
EKAALERPLY AEAYCNMGVI YKNRGELEAA IACYERCLTI SPNFEIAKNN
260 270 280 290 300
MAIALTDLGT KVKIEGDINQ GVAYYKKALF YNWHYADAMY NLGVAYGEML
310 320 330 340 350
NFEMAIVFYE LALHFNPRCA EACNNLGVIY KDRDNLDKAV ECYQMALSIK
360 370 380 390 400
PNFSQSLNNL GVVYTVQGKM DAASSMIQKA IFANSTYAEA YNNLGVLYRD
410 420 430 440 450
AGSITSAVQA YEKCLQIDPD SRNAGQNRLL ALNYIDEGFD DKLYQAHREW
460 470 480 490 500
GKRFLKLYPQ YTSWDNPKVA DRPLVIGYVS PDYFTHSVSY FIEAPLAHHD
510 520 530 540 550
YSNYKVVVYS GVVKADAKTL RFKDKVLKKG GLWRDIYGID EKKVASLVRE
560 570 580 590 600
DKVDILVELT GHTANNKLGT MACRPAPIQV TWIGYPNTTG LPTIDYRITD
610 620 630 640 650
SLADPPDTTQ KHVEELVRLP ESFLCYSPSP EAGPVCPTPA ILNGFITFGS
660 670 680 690 700
FNNLAKITPK VLQVWAKILC AVPNSRLVVK CKPFCCDSIR QKFLSTLAEL
710 720 730 740 750
GLEPLRVDLL PLIHLNHDHM QAYSLMDISL DTFPYAGTTT TCESLYMGVP
760 770 780 790 800
CVTMAGSVHA HNVGVSLLTK VGLGRLVAKS ENEYVSLALD LAADVTALQE
810 820 830 840 850
LRMSLRGLMA KSPVCDGENF TRGLESAYRN MWRRYCDGDA PALRRLDLLQ
860 870 880 890 900
EEPCSNNNKQ DFDDNQVAKL ADLKAQRVDA AVDGDKQSQL TAHAAVVGEV
910 920
QQAPIMVNGV SSPVSSGKVE ANGHISR
Length:927
Mass (Da):102,548
Last modified:July 5, 2004 - v1
Checksum:i83607C53C42AE6AA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP005524 Genomic DNA. Translation: BAD13137.1.
AP008214 Genomic DNA. Translation: BAF24415.1.
AP014964 Genomic DNA. Translation: BAT06686.1.
AK065854 mRNA. Translation: BAG89710.1.
RefSeqiXP_015649746.1. XM_015794260.1.
UniGeneiOs.27475.

Genome annotation databases

EnsemblPlantsiOS08T0559300-01; OS08T0559300-01; OS08G0559300.
GeneIDi4346315.
GrameneiOS08T0559300-01; OS08T0559300-01; OS08G0559300.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP005524 Genomic DNA. Translation: BAD13137.1.
AP008214 Genomic DNA. Translation: BAF24415.1.
AP014964 Genomic DNA. Translation: BAT06686.1.
AK065854 mRNA. Translation: BAG89710.1.
RefSeqiXP_015649746.1. XM_015794260.1.
UniGeneiOs.27475.

3D structure databases

ProteinModelPortaliQ6YZI0.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi39947.LOC_Os08g44510.1.

Protein family/group databases

CAZyiGT41. Glycosyltransferase Family 41.

Proteomic databases

PaxDbiQ6YZI0.
PRIDEiQ6YZI0.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiOS08T0559300-01; OS08T0559300-01; OS08G0559300.
GeneIDi4346315.
GrameneiOS08T0559300-01; OS08T0559300-01; OS08G0559300.

Phylogenomic databases

eggNOGiENOG410IRRE. Eukaryota.
COG3914. LUCA.
HOGENOMiHOG000030819.
InParanoidiQ6YZI0.
OMAiYQAHREW.
OrthoDBiEOG093601FF.

Enzyme and pathway databases

UniPathwayiUPA00378.

Gene expression databases

ExpressionAtlasiQ6YZI0. baseline and differential.
GenevisibleiQ6YZI0. OS.

Family and domain databases

Gene3Di1.25.40.10. 3 hits.
InterProiIPR029489. OGT/SEC/SPY_C.
IPR006597. Sel1-like.
IPR013026. TPR-contain_dom.
IPR011990. TPR-like_helical_dom.
IPR001440. TPR_1.
IPR019734. TPR_repeat.
[Graphical view]
PfamiPF13844. Glyco_transf_41. 2 hits.
PF00515. TPR_1. 5 hits.
[Graphical view]
SMARTiSM00671. SEL1. 3 hits.
SM00028. TPR. 11 hits.
[Graphical view]
SUPFAMiSSF48452. SSF48452. 3 hits.
PROSITEiPS50005. TPR. 11 hits.
PS50293. TPR_REGION. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiSPY_ORYSJ
AccessioniPrimary (citable) accession number: Q6YZI0
Secondary accession number(s): Q0J3Q0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 22, 2005
Last sequence update: July 5, 2004
Last modified: September 7, 2016
This is version 82 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.