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Protein

Endoglucanase 19

Gene

Os08g0114200

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-beta-D-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei442 – 4421PROSITE-ProRule annotation
Active sitei493 – 4931PROSITE-ProRule annotation
Active sitei502 – 5021PROSITE-ProRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Glycosidase, Hydrolase

Keywords - Biological processi

Carbohydrate metabolism, Cell wall biogenesis/degradation, Cellulose degradation, Polysaccharide degradation

Protein family/group databases

CAZyiGH9. Glycoside Hydrolase Family 9.

Names & Taxonomyi

Protein namesi
Recommended name:
Endoglucanase 19 (EC:3.2.1.4)
Alternative name(s):
Endo-1,4-beta glucanase 19
Gene namesi
Ordered Locus Names:Os08g0114200, LOC_Os08g02220
ORF Names:P0427G12.14
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryza
ProteomesiUP000000763 Componenti: Chromosome 8

Organism-specific databases

GrameneiQ6YXT7.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Secreted

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 5252Sequence AnalysisAdd
BLAST
Chaini53 – 523471Endoglucanase 19PRO_0000249296Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Glycosylationi279 – 2791N-linked (GlcNAc...)Sequence Analysis

Keywords - PTMi

Glycoprotein

Proteomic databases

PaxDbiQ6YXT7.
PRIDEiQ6YXT7.

Expressioni

Gene expression databases

ExpressionAtlasiQ6YXT7. baseline and differential.

Structurei

3D structure databases

ProteinModelPortaliQ6YXT7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiNOG05134.
HOGENOMiHOG000021033.
InParanoidiQ6YXT7.
OMAiMDHRCWE.

Family and domain databases

Gene3Di1.50.10.10. 1 hit.
InterProiIPR008928. 6-hairpin_glycosidase-like.
IPR012341. 6hp_glycosidase.
IPR001701. Glyco_hydro_9.
IPR018221. Glyco_hydro_9_AS.
[Graphical view]
PfamiPF00759. Glyco_hydro_9. 1 hit.
[Graphical view]
SUPFAMiSSF48208. SSF48208. 1 hit.
PROSITEiPS00698. GLYCOSYL_HYDROL_F9_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q6YXT7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MCSWSLSSHT LTSPVRQAAM EPKSSSCGGA GIRLRLLVVL HLLLLVPSSA
60 70 80 90 100
MAFNYADALA KSIIFFEGQR SGKLPPGNRM PWRADSGLTD GAQYNVDLVG
110 120 130 140 150
GYYDAGDNVK FGLPMAFSTT MLAWSVLDFG KFMGAELPNA RAAVRWGADY
160 170 180 190 200
LLKAATATPG ALYVQVADPN QDHRCWERPE DMDTPRSVYR VTADKPGSDV
210 220 230 240 250
AGETAAALAA SSMVFRRADP AYSARLLHAA TQVFDFADRH RGSYSDSLAS
260 270 280 290 300
SVCPFYCSYS GYHDELLWGA SWLHRASRNA SFMSYVEANG MQLGAGDDDY
310 320 330 340 350
SFSWDDKRVG TKVLLAKGFL RNRLHGLELY KAHSDSYICS LVPGTASFQS
360 370 380 390 400
RYTPGGLLYR EGSSNMQYVT TATFLMLAYA KYLRSSGATA SCGDGGGGAR
410 420 430 440 450
GEVSAAELVA VAKRQVDYIL GKNPAGMSYM VGFGCRYPRR AHHRGASMPS
460 470 480 490 500
VRAHPGRISC DAGFGYLHSG EPNPNVLVGA VVGGPDSRDA FADDRGNFAQ
510 520
SEPATYINAP LVGALAYFAG TTK
Length:523
Mass (Da):56,214
Last modified:July 5, 2004 - v1
Checksum:iF047BC4FC913A022
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP005657 Genomic DNA. Translation: BAD10555.1.
AP008214 Genomic DNA. Translation: BAF22762.1.
AK106851 mRNA. Translation: BAG97853.1.
RefSeqiNP_001060848.1. NM_001067383.1.
UniGeneiOs.54829.

Genome annotation databases

EnsemblPlantsiOS08T0114200-01; OS08T0114200-01; OS08G0114200.
GeneIDi4344508.
KEGGiosa:4344508.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP005657 Genomic DNA. Translation: BAD10555.1.
AP008214 Genomic DNA. Translation: BAF22762.1.
AK106851 mRNA. Translation: BAG97853.1.
RefSeqiNP_001060848.1. NM_001067383.1.
UniGeneiOs.54829.

3D structure databases

ProteinModelPortaliQ6YXT7.
ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

CAZyiGH9. Glycoside Hydrolase Family 9.

Proteomic databases

PaxDbiQ6YXT7.
PRIDEiQ6YXT7.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiOS08T0114200-01; OS08T0114200-01; OS08G0114200.
GeneIDi4344508.
KEGGiosa:4344508.

Organism-specific databases

GrameneiQ6YXT7.

Phylogenomic databases

eggNOGiNOG05134.
HOGENOMiHOG000021033.
InParanoidiQ6YXT7.
OMAiMDHRCWE.

Gene expression databases

ExpressionAtlasiQ6YXT7. baseline and differential.

Family and domain databases

Gene3Di1.50.10.10. 1 hit.
InterProiIPR008928. 6-hairpin_glycosidase-like.
IPR012341. 6hp_glycosidase.
IPR001701. Glyco_hydro_9.
IPR018221. Glyco_hydro_9_AS.
[Graphical view]
PfamiPF00759. Glyco_hydro_9. 1 hit.
[Graphical view]
SUPFAMiSSF48208. SSF48208. 1 hit.
PROSITEiPS00698. GLYCOSYL_HYDROL_F9_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  2. "The rice annotation project database (RAP-DB): 2008 update."
    The rice annotation project (RAP)
    Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: cv. Nipponbare.
  3. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
    The rice full-length cDNA consortium
    Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Nipponbare.

Entry informationi

Entry nameiGUN19_ORYSJ
AccessioniPrimary (citable) accession number: Q6YXT7
Secondary accession number(s): Q0J8F3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 5, 2006
Last sequence update: July 5, 2004
Last modified: July 22, 2015
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.