Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

Q6YNI5 (NTD_LACFE) Reviewed, UniProtKB/Swiss-Prot

Last modified October 16, 2013. Version 31. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Nucleoside deoxyribosyltransferase

Short name=N-deoxyribosyltransferase
EC=2.4.2.6
Gene names
Name:ntd
OrganismLactobacillus fermentum
Taxonomic identifier1613 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliLactobacillalesLactobacillaceaeLactobacillus

Protein attributes

Sequence length168 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes the cleavage of the glycosidic bond of 2'-deoxyribonucleosides and the transfer of the deoxyribosyl moiety to an acceptor purine or pyrimidine base By similarity.

Catalytic activity

2-deoxy-D-ribosyl-base1 + base2 = 2-deoxy-D-ribosyl-base2 + base1.

Pathway

Nucleotide metabolism; nucleotide salvage pathway.

Sequence similarities

Belongs to the nucleoside deoxyribosyltransferase family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 168168Nucleoside deoxyribosyltransferase
PRO_0000220065

Sites

Active site1031Nucleophile By similarity

Sequences

Sequence LengthMass (Da)Tools
Q6YNI5 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: 362162F43586C317

FASTA16818,896
        10         20         30         40         50         60 
MKNTDPVANT KIYLATSFFN EEQRARIPQA LAQLEANPTV GVVHQPFDFQ YKDARVDSDP 

        70         80         90        100        110        120 
AGVFGSLEWQ IATYNNDLNA VGTSDVCVAL YDMDQIDEGI CMEIGMFVAL HKPIVLLPFT 

       130        140        150        160 
KKDKSAYEAN LMLARGVTTW LEPNDFSPLK DFNFNHPMAQ PFPPFKVF 

« Hide

References

[1]"Characteriztion of the Lactobacillus fermentum N-deoxyribosyltransferase."
Kaminski P.A.
Submitted (NOV-2001) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
Strain: ATCC 14931 / DSM 20052 / JCM 1173 / NBRC 15885 / NCIMB 11840 / VTT E-93489.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AY064168 Genomic DNA. Translation: AAL73115.1.

3D structure databases

ProteinModelPortalQ6YNI5.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Enzyme and pathway databases

UniPathwayUPA00312.

Family and domain databases

Gene3D3.40.50.1810. 1 hit.
InterProIPR007710. Nucleoside_deoxyribTrfase.
[Graphical view]
PfamPF05014. Nuc_deoxyrib_tr. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameNTD_LACFE
AccessionPrimary (citable) accession number: Q6YNI5
Entry history
Integrated into UniProtKB/Swiss-Prot: September 13, 2004
Last sequence update: July 5, 2004
Last modified: October 16, 2013
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways