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Q6YNI5

- NTD_LACFE

UniProt

Q6YNI5 - NTD_LACFE

Protein

Nucleoside deoxyribosyltransferase

Gene

ntd

Organism
Lactobacillus fermentum
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 32 (01 Oct 2014)
      Sequence version 1 (05 Jul 2004)
      Previous versions | rss
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    • Comment

    Functioni

    Catalyzes the cleavage of the glycosidic bond of 2'-deoxyribonucleosides and the transfer of the deoxyribosyl moiety to an acceptor purine or pyrimidine base.By similarity

    Catalytic activityi

    2-deoxy-D-ribosyl-base1 + base2 = 2-deoxy-D-ribosyl-base2 + base1.

    Pathwayi

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei103 – 1031NucleophileBy similarity

    GO - Molecular functioni

    1. deoxyribonucleoside 5'-monophosphate N-glycosidase activity Source: InterPro
    2. nucleoside deoxyribosyltransferase activity Source: UniProtKB-EC

    GO - Biological processi

    1. deoxyribonucleoside monophosphate catabolic process Source: InterPro
    2. nucleotide salvage Source: UniProtKB-UniPathway

    Keywords - Molecular functioni

    Transferase

    Keywords - Biological processi

    Nucleotide metabolism

    Enzyme and pathway databases

    UniPathwayiUPA00312.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Nucleoside deoxyribosyltransferase (EC:2.4.2.6)
    Short name:
    N-deoxyribosyltransferase
    Gene namesi
    Name:ntd
    OrganismiLactobacillus fermentum
    Taxonomic identifieri1613 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesLactobacillaceaeLactobacillus

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 168168Nucleoside deoxyribosyltransferasePRO_0000220065Add
    BLAST

    Structurei

    3D structure databases

    ProteinModelPortaliQ6YNI5.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Family and domain databases

    Gene3Di3.40.50.1810. 1 hit.
    InterProiIPR007710. Nucleoside_deoxyribTrfase.
    [Graphical view]
    PfamiPF05014. Nuc_deoxyrib_tr. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q6YNI5-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKNTDPVANT KIYLATSFFN EEQRARIPQA LAQLEANPTV GVVHQPFDFQ    50
    YKDARVDSDP AGVFGSLEWQ IATYNNDLNA VGTSDVCVAL YDMDQIDEGI 100
    CMEIGMFVAL HKPIVLLPFT KKDKSAYEAN LMLARGVTTW LEPNDFSPLK 150
    DFNFNHPMAQ PFPPFKVF 168
    Length:168
    Mass (Da):18,896
    Last modified:July 5, 2004 - v1
    Checksum:i362162F43586C317
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AY064168 Genomic DNA. Translation: AAL73115.1.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AY064168 Genomic DNA. Translation: AAL73115.1 .

    3D structure databases

    ProteinModelPortali Q6YNI5.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Enzyme and pathway databases

    UniPathwayi UPA00312 .

    Family and domain databases

    Gene3Di 3.40.50.1810. 1 hit.
    InterProi IPR007710. Nucleoside_deoxyribTrfase.
    [Graphical view ]
    Pfami PF05014. Nuc_deoxyrib_tr. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Characteriztion of the Lactobacillus fermentum N-deoxyribosyltransferase."
      Kaminski P.A.
      Submitted (NOV-2001) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
      Strain: ATCC 14931 / DSM 20052 / JCM 1173 / NBRC 15885 / NCIMB 11840 / VTT E-93489.

    Entry informationi

    Entry nameiNTD_LACFE
    AccessioniPrimary (citable) accession number: Q6YNI5
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: September 13, 2004
    Last sequence update: July 5, 2004
    Last modified: October 1, 2014
    This is version 32 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Documents

    1. PATHWAY comments
      Index of metabolic and biosynthesis pathways
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3