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Q6YNI5

- NTD_LACFE

UniProt

Q6YNI5 - NTD_LACFE

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Protein

Nucleoside deoxyribosyltransferase

Gene
ntd
Organism
Lactobacillus fermentum
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalyzes the cleavage of the glycosidic bond of 2'-deoxyribonucleosides and the transfer of the deoxyribosyl moiety to an acceptor purine or pyrimidine base By similarity.

Catalytic activityi

2-deoxy-D-ribosyl-base1 + base2 = 2-deoxy-D-ribosyl-base2 + base1.

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei103 – 1031Nucleophile By similarity

GO - Molecular functioni

  1. deoxyribonucleoside 5'-monophosphate N-glycosidase activity Source: InterPro
  2. nucleoside deoxyribosyltransferase activity Source: UniProtKB-EC

GO - Biological processi

  1. deoxyribonucleoside monophosphate catabolic process Source: InterPro
  2. nucleotide salvage Source: UniProtKB-UniPathway
Complete GO annotation...

Keywords - Molecular functioni

Transferase

Keywords - Biological processi

Nucleotide metabolism

Enzyme and pathway databases

UniPathwayiUPA00312.

Names & Taxonomyi

Protein namesi
Recommended name:
Nucleoside deoxyribosyltransferase (EC:2.4.2.6)
Short name:
N-deoxyribosyltransferase
Gene namesi
Name:ntd
OrganismiLactobacillus fermentum
Taxonomic identifieri1613 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesLactobacillaceaeLactobacillus

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 168168Nucleoside deoxyribosyltransferasePRO_0000220065Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliQ6YNI5.

Family & Domainsi

Sequence similaritiesi

Family and domain databases

Gene3Di3.40.50.1810. 1 hit.
InterProiIPR007710. Nucleoside_deoxyribTrfase.
[Graphical view]
PfamiPF05014. Nuc_deoxyrib_tr. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q6YNI5-1 [UniParc]FASTAAdd to Basket

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MKNTDPVANT KIYLATSFFN EEQRARIPQA LAQLEANPTV GVVHQPFDFQ    50
YKDARVDSDP AGVFGSLEWQ IATYNNDLNA VGTSDVCVAL YDMDQIDEGI 100
CMEIGMFVAL HKPIVLLPFT KKDKSAYEAN LMLARGVTTW LEPNDFSPLK 150
DFNFNHPMAQ PFPPFKVF 168
Length:168
Mass (Da):18,896
Last modified:July 5, 2004 - v1
Checksum:i362162F43586C317
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AY064168 Genomic DNA. Translation: AAL73115.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AY064168 Genomic DNA. Translation: AAL73115.1 .

3D structure databases

ProteinModelPortali Q6YNI5.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Enzyme and pathway databases

UniPathwayi UPA00312 .

Family and domain databases

Gene3Di 3.40.50.1810. 1 hit.
InterProi IPR007710. Nucleoside_deoxyribTrfase.
[Graphical view ]
Pfami PF05014. Nuc_deoxyrib_tr. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Characteriztion of the Lactobacillus fermentum N-deoxyribosyltransferase."
    Kaminski P.A.
    Submitted (NOV-2001) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: ATCC 14931 / DSM 20052 / JCM 1173 / NBRC 15885 / NCIMB 11840 / VTT E-93489.

Entry informationi

Entry nameiNTD_LACFE
AccessioniPrimary (citable) accession number: Q6YNI5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 13, 2004
Last sequence update: July 5, 2004
Last modified: October 16, 2013
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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