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Q6YM50

- MAN5_SOLLC

UniProt

Q6YM50 - MAN5_SOLLC

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Protein

Mannan endo-1,4-beta-mannosidase 5

Gene
MAN5
Organism
Solanum lycopersicum (Tomato) (Lycopersicon esculentum)
Status
Reviewed - Annotation score: 3 out of 5 - Experimental evidence at transcript leveli

Functioni

May be involved in weakening of anther wall during pollen development.

Catalytic activityi

Random hydrolysis of (1->4)-beta-D-mannosidic linkages in mannans, galactomannans and glucomannans.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei211 – 2111Proton donor By similarity
Active sitei328 – 3281Nucleophile By similarity

GO - Molecular functioni

  1. mannan endo-1,4-beta-mannosidase activity Source: UniProtKB-EC

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Glycosidase, Hydrolase

Protein family/group databases

CAZyiGH5. Glycoside Hydrolase Family 5.

Names & Taxonomyi

Protein namesi
Recommended name:
Mannan endo-1,4-beta-mannosidase 5 (EC:3.2.1.78)
Alternative name(s):
Beta-mannanase 5
Endo-beta-1,4-mannanase 5
LeMAN5
Gene namesi
Name:MAN5
OrganismiSolanum lycopersicum (Tomato) (Lycopersicon esculentum)
Taxonomic identifieri4081 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaeasteridslamiidsSolanalesSolanaceaeSolanoideaeSolaneaeSolanumLycopersicon
ProteomesiUP000004994: Chromosome 6

Subcellular locationi

Secreted Reviewed prediction

GO - Cellular componenti

  1. extracellular region Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Secreted

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2525 Reviewed predictionAdd
BLAST
Chaini26 – 414389Mannan endo-1,4-beta-mannosidase 5PRO_5000088873Add
BLAST

Expressioni

Developmental stagei

Expressed in anthers and pollen of unopened bud and opening flowers, but not in fully opened flowers.1 Publication

Structurei

3D structure databases

ProteinModelPortaliQ6YM50.

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Signal

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR001547. Glyco_hydro_5.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamiPF00150. Cellulase. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q6YM50-1 [UniParc]FASTAAdd to Basket

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MAYFQRLISC IFVLFLLSLA FACEARVLLD ENNANDQGFV RVNGAHFELN    50
GSPFLFNGFN SYWLMHVAAE PSERYKVSEV LREASSAGLS VCRTWAFSDG 100
GDRALQISPG VYDERVFQGL DFVISEAKKY GIRLILSFVN NYNDFGGKAQ 150
YVQWARNAGA QINGDDDFYT NYITKNYYKN HIKKVVTRFN TITGMTYKDD 200
STIMAWELMN EPRNQADYSG NTLNAWVQEM ASFVKSLDNK HLLEIGMEGF 250
YGDSVPERKS INPGYQVGTD FISNHLIKEI DFATIHAYTD QWLSGQSDDA 300
QMIFMQKWMT SHWQDAKNIL KKPLVLAEFG KSSRDPGYNQ NIRDTFMSTI 350
YRNIYSLAKD GGTMGGSLIW QLVAQGMENY EDGYCIELGK NPSTAGIITS 400
QSHAMTALAH LVKI 414
Length:414
Mass (Da):46,835
Last modified:July 5, 2004 - v1
Checksum:i2ED692448896046E
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AY102168 Genomic DNA. Translation: AAM26920.1.
RefSeqiNP_001234473.1. NM_001247544.1.
UniGeneiLes.108.

Genome annotation databases

EnsemblPlantsiSolyc06g064520.2.1; Solyc06g064520.2.1; Solyc06g064520.2.
GeneIDi544170.
KEGGisly:544170.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AY102168 Genomic DNA. Translation: AAM26920.1 .
RefSeqi NP_001234473.1. NM_001247544.1.
UniGenei Les.108.

3D structure databases

ProteinModelPortali Q6YM50.
ModBasei Search...
MobiDBi Search...

Protein family/group databases

CAZyi GH5. Glycoside Hydrolase Family 5.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi Solyc06g064520.2.1 ; Solyc06g064520.2.1 ; Solyc06g064520.2 .
GeneIDi 544170.
KEGGi sly:544170.

Family and domain databases

Gene3Di 3.20.20.80. 1 hit.
InterProi IPR001547. Glyco_hydro_5.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
Pfami PF00150. Cellulase. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "A novel endo-beta-mannanase gene in tomato LeMAN5 is associated with anther and pollen development."
    Filichkin S.A., Leonard J.M., Monteros A., Liu P.-P., Nonogaki H.
    Plant Physiol. 134:1080-1087(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA], DEVELOPMENTAL STAGE.
    Strain: cv. Moneymaker.

Entry informationi

Entry nameiMAN5_SOLLC
AccessioniPrimary (citable) accession number: Q6YM50
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 6, 2007
Last sequence update: July 5, 2004
Last modified: February 19, 2014
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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