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Q6YHU6 (THADA_HUMAN) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 64. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (5) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Thyroid adenoma-associated protein
Alternative name(s):
Gene inducing thyroid adenomas protein
Gene names
Name:THADA
Synonyms:GITA, KIAA1767
OrganismHomo sapiens (Human)
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length1953 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Tissue specificity

Expressed in pancreas, adrenal medulla, thyroid, adrenal cortex, testis, thymus, small intestine and stomach. Ref.1

Involvement in disease

Note=Chromosomal aberrations involving THADA have been observed in benign thyroid adenomas. Translocation t(2;3)(p21;p25) and translocation t(2;7)(p21;p15); the sequences derived from chromosomes 3p25 and 7p15 do not appear to include a coding region and the fusion events probably result in truncated THADA proteins.

Sequence similarities

Belongs to the THADA family.

Sequence caution

The sequence BAB15133.1 differs from that shown. Reason: Erroneous initiation.

The sequence BAB15162.1 differs from that shown. Reason: Erroneous initiation.

The sequence BAB21858.2 differs from that shown. Reason: Erroneous initiation.

Ontologies

Keywords
   Coding sequence diversityAlternative splicing
Chromosomal rearrangement
Polymorphism
   DomainCoiled coil
   PTMPhosphoprotein
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Molecular functionbinding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Alternative products

This entry describes 5 isoforms produced by alternative splicing. [Align] [Select]
Isoform 1 (identifier: Q6YHU6-1)

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.
Isoform 2 (identifier: Q6YHU6-2)

Also known as: GITA-A2;

The sequence of this isoform differs from the canonical sequence as follows:
     1-290: Missing.
     1249-1279: Missing.
Isoform 3 (identifier: Q6YHU6-3)

The sequence of this isoform differs from the canonical sequence as follows:
     1280-1353: Missing.
Isoform 4 (identifier: Q6YHU6-4)

The sequence of this isoform differs from the canonical sequence as follows:
     1-1279: Missing.
Isoform 5 (identifier: Q6YHU6-5)

The sequence of this isoform differs from the canonical sequence as follows:
     937-937: N → K
     938-1953: Missing.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 19531953Thyroid adenoma-associated protein
PRO_0000344057

Regions

Coiled coil886 – 91833 Potential
Compositional bias4 – 74Poly-Lys
Compositional bias1322 – 13276Poly-Leu
Compositional bias1529 – 15324Poly-Ala

Amino acid modifications

Modified residue10311Phosphoserine Ref.8
Modified residue11611Phosphoserine Ref.8

Natural variations

Alternative sequence1 – 12791279Missing in isoform 4.
VSP_034730
Alternative sequence1 – 290290Missing in isoform 2.
VSP_034731
Alternative sequence9371N → K in isoform 5.
VSP_034732
Alternative sequence938 – 19531016Missing in isoform 5.
VSP_034733
Alternative sequence1249 – 127931Missing in isoform 2.
VSP_034734
Alternative sequence1280 – 135374Missing in isoform 3.
VSP_034735
Natural variant631E → G.
Corresponds to variant rs10210191 [ dbSNP | Ensembl ].
VAR_054070
Natural variant6991V → I. Ref.2 Ref.3
Corresponds to variant rs17031056 [ dbSNP | Ensembl ].
VAR_054071
Natural variant11871T → A.
Corresponds to variant rs7578597 [ dbSNP | Ensembl ].
VAR_054072
Natural variant13851T → S. Ref.5
Corresponds to variant rs33979934 [ dbSNP | Ensembl ].
VAR_054073
Natural variant14511P → S.
Corresponds to variant rs17334247 [ dbSNP | Ensembl ].
VAR_054074
Natural variant16051C → Y. Ref.5
Corresponds to variant rs35720761 [ dbSNP | Ensembl ].
VAR_054075
Natural variant16681C → R.
Corresponds to variant rs17030648 [ dbSNP | Ensembl ].
VAR_054076

Experimental info

Sequence conflict2451Q → R in BAC86389. Ref.3
Sequence conflict15071F → L in BAB15133. Ref.3
Sequence conflict17091T → I in BAB15133. Ref.3

Sequences

Sequence LengthMass (Da)Tools
Isoform 1 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: 53099534C8B1D80E

FASTA1,953219,607
        10         20         30         40         50         60 
MGVKKKKEMQ VAALTICHQD LETLKSFADV EGKNLASLLL HCVQLTDGVS QIHYIKQIVP 

        70         80         90        100        110        120 
LLEKADKNGM CDPTIQSCLD ILAGIYLSLS LKNPLKKVLA SSLNSLPDFF LPEAMHRFTS 

       130        140        150        160        170        180 
RLQEELNTTD LYSYRKVTDN ISSCMENFNL GRASVNNLLK NVLHFLQKSL IEILEENRKC 

       190        200        210        220        230        240 
AGNHIIQTQL MNDLLVGIRV SMMLVQKVQD FQGNLWKTSD SPIWQNMCGL LSIFTKVLSD 

       250        260        270        280        290        300 
DDLLQTVQST SGLAIILFIK TMFHPSEKIP HLISSVLLRS VDCTSVPEWF MSSCRSLCCG 

       310        320        330        340        350        360 
DISQSAVLFL CQGTLAMLDW QNGSMGRSGE ALLLDTAHVL FTLSSQIKEP TLEMFLSRIL 

       370        380        390        400        410        420 
ASWTNSAIQV LESSSPSLTD SLNGNSSIVG RLLEYVYTHW EHPLDALRHQ TKIMFKNLLQ 

       430        440        450        460        470        480 
MHRLTVEGAD FVPDPFFVEL TESLLRLEWH IKGKYTCLGC LVECIGVEHI LAIDKTIPSQ 

       490        500        510        520        530        540 
ILEVMGDQSL VPYASDLLET MFRNHKSHLK SQTAESSWID QWHETWVSPL LFILCEGNLD 

       550        560        570        580        590        600 
QKSYVIDYYL PKLLSYSPES LQYMVKILQT SIDAKTGQEQ SFPSLGSCNS RGALGALMAC 

       610        620        630        640        650        660 
LRIARAHGHL QSATDTWENL VSDARIKQGL IHQHCQVRID TLGLLCESNR STEIVSMEEM 

       670        680        690        700        710        720 
QWIQFFITYN LNSQSPGVRQ QICSLLKKLF CRIQESSQVL YKLEQSKSKR EPENELTKQH 

       730        740        750        760        770        780 
PSVSLQQYKN FMSSICNSLF EALFPGSSYS TRFSALTILG SIAEVFHVPE GRIYTVYQLS 

       790        800        810        820        830        840 
HDIDVGRFQT LMECFTSTFE DVKILAFDLL MKLSKTAVHF QDSGKLQGLF QAALELSTST 

       850        860        870        880        890        900 
KPYDCVTASY LLNFLIWQDA LPSSLSAYLT QQVACDNGDR PAAVVERNTL MVIKCLMENL 

       910        920        930        940        950        960 
EEEVSQAENS LLQAAAAFPM YGRVHCITGA LQKLSLNSLQ LVSEWRPVVE KLLLMSYRLS 

       970        980        990       1000       1010       1020 
TVVSPVIQSS SPEGLIPMDT DSESASRLQM ILNEIQPRDT NDYFNQAKIL KEHDSFDMKD 

      1030       1040       1050       1060       1070       1080 
LNASVVNIDT STEIKGKEVK TCDVTAQMVL VCCWRSMKEV ALLLGMLCQL LPMQPVPESS 

      1090       1100       1110       1120       1130       1140 
DGLLTVEQVK EIGDYFKQHL LQSRHRGAFE LAYTGFVKLT EVLNRCPNVS LQKLPEQWLW 

      1150       1160       1170       1180       1190       1200 
SVLEEIKCSD PSSKLCATRR SAGIPFYIQA LLASEPKKGR MDLLKITMKE LISLAGPTDD 

      1210       1220       1230       1240       1250       1260 
IQSTVPQVHA LNILRALFRD TRLGENIIPY VADGAKAAIL GFTSPVWAVR NSSTLLFSAL 

      1270       1280       1290       1300       1310       1320 
ITRIFGVKRA KDEHSKTNRM TGREFFSRFP ELYPFLLKQL ETVANTVDSD MGEPNRHPSM 

      1330       1340       1350       1360       1370       1380 
FLLLLVLERL YASPMDGTSS ALSMGPFVPF IMRCGHSPVY HSREMAARAL VPFVMIDHIP 

      1390       1400       1410       1420       1430       1440 
NTIRTLLSTL PSCTDQCFRQ NHIHGTLLQV FHLLQAYSDS KHGTNSDFQH ELTDITVCTK 

      1450       1460       1470       1480       1490       1500 
AKLWLAKRQN PCLVTRAVYI DILFLLTCCL NRSAKDNQPV LESLGFWEEV RGIISGSELI 

      1510       1520       1530       1540       1550       1560 
TGFPWAFKVP GLPQYLQSLT RLAIAAVWAA AAKSGERETN VPISFSQLLE SAFPEVRSLT 

      1570       1580       1590       1600       1610       1620 
LEALLEKFLA AASGLGEKGV PPLLCNMGEK FLLLAMKENH PECFCKILKI LHCMDPGEWL 

      1630       1640       1650       1660       1670       1680 
PQTEHCVHLT PKEFLIWTMD IASNERSEIQ SVALRLASKV ISHHMQTCVE NRELIAAELK 

      1690       1700       1710       1720       1730       1740 
QWVQLVILSC EDHLPTESRL AVVEVLTSTT PLFLTNPHPI LELQDTLALW KCVLTLLQSE 

      1750       1760       1770       1780       1790       1800 
EQAVRDAATE TVTTAMSQEN TCQSTEFAFC QVDASIALAL ALAVLCDLLQ QWDQLAPGLP 

      1810       1820       1830       1840       1850       1860 
ILLGWLLGES DDLVACVESM HQVEEDYLFE KAEVNFWAET LIFVKYLCKH LFCLLSKSGW 

      1870       1880       1890       1900       1910       1920 
RPPSPEMLCH LQRMVSEQCH LLSQFFRELP PAAEFVKTVE FTRLRIQEER TLACLRLLAF 

      1930       1940       1950 
LEGKEGEDTL VLSVWDSYAE SRQLTLPRTE AAC 

« Hide

Isoform 2 (GITA-A2) [UniParc].

Checksum: B08341A3BA07CDC2
Show »

FASTA1,632183,444
Isoform 3 [UniParc].

Checksum: 4FF939966B462137
Show »

FASTA1,879211,180
Isoform 4 [UniParc].

Checksum: E1AFFD757D82C1AA
Show »

FASTA67475,966
Isoform 5 [UniParc].

Checksum: D2093158F2BFBE6B
Show »

FASTA937105,383

References

« Hide 'large scale' references
[1]"Identification of a gene rearranged by 2p21 aberrations in thyroid adenomas."
Rippe V., Drieschner N., Meiboom M., Murua Escobar H., Bonk U., Belge G., Bullerdiek J.
Oncogene 22:6111-6114(2003) [PubMed: 12955091] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS 1 AND 2), TISSUE SPECIFICITY, CHROMOSOMAL TRANSLOCATIONS.
[2]"Prediction of the coding sequences of unidentified human genes. XIX. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro."
Nagase T., Kikuno R., Hattori A., Kondo Y., Okumura K., Ohara O.
DNA Res. 7:347-355(2000) [PubMed: 11214970] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA], VARIANT ILE-699.
Tissue: Brain.
[3]"Complete sequencing and characterization of 21,243 full-length human cDNAs."
Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. expand/collapse author list , Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.
Nat. Genet. 36:40-45(2004) [PubMed: 14702039] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1 AND 5), NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 688-1953 (ISOFORM 3), VARIANT ILE-699.
Tissue: Testis.
[4]"Generation and annotation of the DNA sequences of human chromosomes 2 and 4."
Hillier L.W., Graves T.A., Fulton R.S., Fulton L.A., Pepin K.H., Minx P., Wagner-McPherson C., Layman D., Wylie K., Sekhon M., Becker M.C., Fewell G.A., Delehaunty K.D., Miner T.L., Nash W.E., Kremitzki C., Oddy L., Du H. expand/collapse author list , Sun H., Bradshaw-Cordum H., Ali J., Carter J., Cordes M., Harris A., Isak A., van Brunt A., Nguyen C., Du F., Courtney L., Kalicki J., Ozersky P., Abbott S., Armstrong J., Belter E.A., Caruso L., Cedroni M., Cotton M., Davidson T., Desai A., Elliott G., Erb T., Fronick C., Gaige T., Haakenson W., Haglund K., Holmes A., Harkins R., Kim K., Kruchowski S.S., Strong C.M., Grewal N., Goyea E., Hou S., Levy A., Martinka S., Mead K., McLellan M.D., Meyer R., Randall-Maher J., Tomlinson C., Dauphin-Kohlberg S., Kozlowicz-Reilly A., Shah N., Swearengen-Shahid S., Snider J., Strong J.T., Thompson J., Yoakum M., Leonard S., Pearman C., Trani L., Radionenko M., Waligorski J.E., Wang C., Rock S.M., Tin-Wollam A.-M., Maupin R., Latreille P., Wendl M.C., Yang S.-P., Pohl C., Wallis J.W., Spieth J., Bieri T.A., Berkowicz N., Nelson J.O., Osborne J., Ding L., Meyer R., Sabo A., Shotland Y., Sinha P., Wohldmann P.E., Cook L.L., Hickenbotham M.T., Eldred J., Williams D., Jones T.A., She X., Ciccarelli F.D., Izaurralde E., Taylor J., Schmutz J., Myers R.M., Cox D.R., Huang X., McPherson J.D., Mardis E.R., Clifton S.W., Warren W.C., Chinwalla A.T., Eddy S.R., Marra M.A., Ovcharenko I., Furey T.S., Miller W., Eichler E.E., Bork P., Suyama M., Torrents D., Waterston R.H., Wilson R.K.
Nature 434:724-731(2005) [PubMed: 15815621] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[5]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 4), NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 1118-1953 (ISOFORM 1), VARIANTS SER-1385 AND TYR-1605.
Tissue: Brain, Pancreas and Skin.
[6]"Novel protein interacting with death receptor."
Puduvalli V.K., Ridgway L.
Submitted (NOV-2000) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 1311-1953.
[7]"A domain of the thyroid adenoma associated gene (THADA) conserved in vertebrates becomes destroyed by chromosomal rearrangements observed in thyroid adenomas."
Drieschner N., Kerschling S., Soller J.T., Rippe V., Belge G., Bullerdiek J., Nimzyk R.
Gene 403:110-117(2007) [PubMed: 17889454] [Abstract]
Cited for: CHROMOSOMAL TRANSLOCATIONS.
[8]"Kinase-selective enrichment enables quantitative phosphoproteomics of the kinome across the cell cycle."
Daub H., Olsen J.V., Bairlein M., Gnad F., Oppermann F.S., Korner R., Greff Z., Keri G., Stemmann O., Mann M.
Mol. Cell 31:438-448(2008) [PubMed: 18691976] [Abstract]
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-1031 AND SER-1161, MASS SPECTROMETRY.
Tissue: Cervix carcinoma.
[9]"Initial characterization of the human central proteome."
Burkard T.R., Planyavsky M., Kaupe I., Breitwieser F.P., Buerckstuemmer T., Bennett K.L., Superti-Furga G., Colinge J.
BMC Syst. Biol. 5:17-17(2011) [PubMed: 21269460] [Abstract]
Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AY149629 mRNA. Translation: AAO46785.1.
AY149633 mRNA. Translation: AAO46789.1.
AB051554 mRNA. Translation: BAB21858.2. Different initiation.
AK025530 mRNA. Translation: BAB15162.1. Different initiation.
AK025445 mRNA. Translation: BAB15133.1. Different initiation.
AK126004 mRNA. Translation: BAC86389.1.
AK290023 mRNA. Translation: BAF82712.1.
AC010883 Genomic DNA. Translation: AAY14994.1.
AC092838 Genomic DNA. Translation: AAX93154.1.
BC007743 mRNA. Translation: AAH07743.1.
BC025773 mRNA. Translation: AAH25773.1.
BC105976 mRNA. Translation: AAI05977.1.
AF323176 mRNA. Translation: AAK11318.1.
IPIIPI00894197.
IPI00900266.
IPI00900350.
IPI00917435.
IPI01019074.
RefSeqNP_001077422.1. NM_001083953.1.
NP_071348.3. NM_022065.4.
UniGeneHs.369592.

3D structure databases

ProteinModelPortalQ6YHU6.
ModBaseSearch...

Protein-protein interaction databases

IntActQ6YHU6. 2 interactions.
STRINGQ6YHU6.

Polymorphism databases

DMDM74749519.

Proteomic databases

PRIDEQ6YHU6.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENST00000402360; ENSP00000385441; ENSG00000115970.
ENST00000405006; ENSP00000385995; ENSG00000115970.
ENST00000405975; ENSP00000386088; ENSG00000115970.
ENST00000409142; ENSP00000387029; ENSG00000115970.
GeneID63892.
KEGGhsa:63892.
UCSCuc002rsw.2. human.

Organism-specific databases

CTD63892.
GeneCardsGC02M043393.
H-InvDBHIX0002009.
HGNCHGNC:19217. THADA.
HPAHPA035191.
MIM611800. gene.
neXtProtNX_Q6YHU6.
PharmGKBPA134882460.
HUGESearch...
GenAtlasSearch...

Phylogenomic databases

GeneTreeENSGT00390000015500.
HOVERGENHBG108565.
OrthoDBEOG4MPHP9.
PhylomeDBQ6YHU6.

Gene expression databases

ArrayExpressQ6YHU6.
BgeeQ6YHU6.
GenevestigatorQ6YHU6.

Family and domain databases

InterProIPR016024. ARM-type_fold.
IPR019442. DUF2428_death-receptor-like.
[Graphical view]
PfamPF10350. DUF2428. 1 hit.
[Graphical view]
SUPFAMSSF48371. ARM-type_fold. 1 hit.
ProtoNetSearch...

Other

NextBio65572.
SOURCESearch...

Entry information

Entry nameTHADA_HUMAN
AccessionPrimary (citable) accession number: Q6YHU6
Secondary accession number(s): A8K1V8 expand/collapse secondary AC list , B7WNS6, Q3KR04, Q53RC6, Q53TB2, Q6YHU2, Q6ZU38, Q8TAU8, Q96I88, Q9BZF7, Q9C096, Q9H6U0, Q9H6W7
Entry history
Integrated into UniProtKB/Swiss-Prot: July 22, 2008
Last sequence update: July 5, 2004
Last modified: January 25, 2012
This is version 64 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

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Human chromosome 2: entries, gene names and cross-references to MIM

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List of human entries with polymorphisms or disease mutations

Human polymorphisms and disease mutations

Index of human polymorphisms and disease mutations

MIM cross-references

Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot

SIMILARITY comments

Index of protein domains and families