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Protein
Submitted name:

PSD-95 beta

Gene
N/A
Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
PSD-95 betaImported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Expressioni

Gene expression databases

BgeeiQ6XVF6.
ExpressionAtlasiQ6XVF6. baseline and differential.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000018700.

Structurei

3D structure databases

ProteinModelPortaliQ6XVF6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Contains 2 PDZ (DHR) domains.UniRule annotation

Phylogenomic databases

HOVERGENiHBG104157.

Family and domain databases

Gene3Di2.30.42.10. 2 hits.
InterProiIPR016313. DLG1.
IPR015143. L27_1.
IPR019590. MAGUK_PEST_N.
IPR001478. PDZ.
[Graphical view]
PANTHERiPTHR23119. PTHR23119. 1 hit.
PfamiPF09058. L27_1. 1 hit.
PF10608. MAGUK_N_PEST. 2 hits.
PF00595. PDZ. 2 hits.
[Graphical view]
SMARTiSM00228. PDZ. 2 hits.
[Graphical view]
SUPFAMiSSF50156. SSF50156. 2 hits.
PROSITEiPS50106. PDZ. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

Q6XVF6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSQRPRAPRS ALWLLAPPLL RWAPPLLTVL HSDLFQALLD ILDYYEACIS
60 70 80 90 100
ESQKYRYQDE DTPPLEHSPA HLPNQANSPP VIVNTDTLEA PGYELQVNGT
110 120 130 140 150
EGEMEYEEIT LERGNSGLGF SIAGGTDNPH IGDDPSIFIT KIIPGGAAAQ
160 170 180 190 200
DGRLRVNDSI LFVNEVDVRE VTHSAAVEAL KEAGSIVRLY VMRRKPPAEK
210 220 230 240 250
IIEIKLIKGP KGLGFSIAGG VGNQHIPGDN SIYVTKIIEG GAAHKDGRLQ
260 270 280 290 300
IGDKILAVNS VGLEDVMHED AVAALKNTYD VVYLKVAKPS NAYLSDSYAP

PDITT
Length:305
Mass (Da):33,096
Last modified:July 5, 2004 - v1
Checksum:i9D95377BA63C2DFD
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei305 – 3051Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY207049, AY207048 Genomic DNA. Translation: AAQ56707.1.
UniGeneiMm.27256.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY207049, AY207048 Genomic DNA. Translation: AAQ56707.1.
UniGeneiMm.27256.

3D structure databases

ProteinModelPortaliQ6XVF6.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000018700.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

HOVERGENiHBG104157.

Gene expression databases

BgeeiQ6XVF6.
ExpressionAtlasiQ6XVF6. baseline and differential.

Family and domain databases

Gene3Di2.30.42.10. 2 hits.
InterProiIPR016313. DLG1.
IPR015143. L27_1.
IPR019590. MAGUK_PEST_N.
IPR001478. PDZ.
[Graphical view]
PANTHERiPTHR23119. PTHR23119. 1 hit.
PfamiPF09058. L27_1. 1 hit.
PF10608. MAGUK_N_PEST. 2 hits.
PF00595. PDZ. 2 hits.
[Graphical view]
SMARTiSM00228. PDZ. 2 hits.
[Graphical view]
SUPFAMiSSF50156. SSF50156. 2 hits.
PROSITEiPS50106. PDZ. 2 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Analyses of murine postsynaptic density-95 identify novel isoforms and potential translational control elements."
    Bence M., Arbuckle M.I., Dickson K.S., Grant S.G.
    Brain Res. Mol. Brain Res. 133:143-152(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: 129/SvEvTacfBrImported.

Entry informationi

Entry nameiQ6XVF6_MOUSE
AccessioniPrimary (citable) accession number: Q6XVF6
Entry historyi
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: June 24, 2015
This is version 67 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.