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Q6XVF4 (Q6XVF4_MOUSE) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 61. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
OrganismMus musculus (Mouse) EMBL AAQ56705.1
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Protein attributes

Sequence length262 AA.
Sequence statusFragment.
Protein existencePredicted

General annotation (Comments)

Sequence similarities

Contains 2 PDZ (DHR) domains. RuleBase RU003354

Ontologies

Gene Ontology (GO)
   Biological_processalpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor clustering

Inferred from electronic annotation. Source: Ensembl

dendritic spine morphogenesis

Inferred from electronic annotation. Source: Ensembl

establishment of protein localization

Inferred from electronic annotation. Source: Ensembl

negative regulation of receptor internalization

Inferred from electronic annotation. Source: Ensembl

positive regulation of cytosolic calcium ion concentration

Inferred from electronic annotation. Source: Ensembl

positive regulation of excitatory postsynaptic membrane potential

Inferred from electronic annotation. Source: Ensembl

positive regulation of synaptic transmission

Inferred from electronic annotation. Source: Ensembl

protein complex assembly

Inferred from electronic annotation. Source: Ensembl

receptor localization to synapse

Inferred from electronic annotation. Source: Ensembl

regulation of N-methyl-D-aspartate selective glutamate receptor activity

Inferred from electronic annotation. Source: Ensembl

   Cellular_componentcortical cytoskeleton

Inferred from electronic annotation. Source: Ensembl

dendrite cytoplasm

Inferred from electronic annotation. Source: Ensembl

excitatory synapse

Inferred from electronic annotation. Source: Ensembl

juxtaparanode region of axon

Inferred from electronic annotation. Source: Ensembl

neuronal postsynaptic density

Inferred from electronic annotation. Source: Ensembl

postsynaptic membrane

Inferred from electronic annotation. Source: Ensembl

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue2621 EMBL AAQ56705.1

Sequences

Sequence LengthMass (Da)Tools
Q6XVF4 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: 26EDFD568053A0ED

FASTA26228,145
        10         20         30         40         50         60 
MDCLCIVTTK KYRYQDEDTP PLEHSPAHLP NQANSPPVIV NTDTLEAPGY ELQVNGTEGE 

        70         80         90        100        110        120 
MEYEEITLER GNSGLGFSIA GGTDNPHIGD DPSIFITKII PGGAAAQDGR LRVNDSILFV 

       130        140        150        160        170        180 
NEVDVREVTH SAAVEALKEA GSIVRLYVMR RKPPAEKIIE IKLIKGPKGL GFSIAGGVGN 

       190        200        210        220        230        240 
QHIPGDNSIY VTKIIEGGAA HKDGRLQIGD KILAVNSVGL EDVMHEDAVA ALKNTYDVVY 

       250        260 
LKVAKPSNAY LSDSYAPPDI TT 

« Hide

References

[1]"Analyses of murine postsynaptic density-95 identify novel isoforms and potential translational control elements."
Bence M., Arbuckle M.I., Dickson K.S., Grant S.G.
Brain Res. Mol. Brain Res. 133:143-152(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 129/SvEvTacfBr EMBL AAQ56705.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AY207049, AY207048 Genomic DNA. Translation: AAQ56705.1.
UniGeneMm.27256.

3D structure databases

ProteinModelPortalQ6XVF4.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Phylogenomic databases

HOVERGENHBG104157.

Gene expression databases

ArrayExpressQ6XVF4.
BgeeQ6XVF4.
GenevestigatorQ6XVF4.

Family and domain databases

Gene3D2.30.42.10. 2 hits.
InterProIPR016313. DLG1.
IPR019590. MAGUK_PEST_N.
IPR001478. PDZ.
[Graphical view]
PANTHERPTHR23119. PTHR23119. 1 hit.
PfamPF10608. MAGUK_N_PEST. 2 hits.
PF00595. PDZ. 2 hits.
[Graphical view]
SMARTSM00228. PDZ. 2 hits.
[Graphical view]
SUPFAMSSF50156. SSF50156. 2 hits.
PROSITEPS50106. PDZ. 2 hits.
[Graphical view]
ProtoNetSearch...

Other

ChiTaRSDLG4. mouse.

Entry information

Entry nameQ6XVF4_MOUSE
AccessionPrimary (citable) accession number: Q6XVF4
Entry history
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: July 9, 2014
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)