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Protein
Submitted name:

FirrV-1-A6

Gene
N/A
Organism
Feldmannia irregularis virus a
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

DNA replicationUniRule annotation

Keywords - Ligandi

DNA-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
FirrV-1-A6Imported
OrganismiFeldmannia irregularis virus aImported
Taxonomic identifieri231992 [NCBI]
Taxonomic lineageiVirusesdsDNA viruses, no RNA stagePhycodnaviridaePhaeovirus

Structurei

3D structure databases

ProteinModelPortaliQ6XM81.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the PCNA family.UniRule annotation

Family and domain databases

InterProiIPR000730. Pr_cel_nuc_antig.
IPR022649. Pr_cel_nuc_antig_C.
IPR022648. Pr_cel_nuc_antig_N.
[Graphical view]
PANTHERiPTHR11352. PTHR11352. 1 hit.
PfamiPF02747. PCNA_C. 1 hit.
PF00705. PCNA_N. 1 hit.
[Graphical view]
PRINTSiPR00339. PCNACYCLIN.
TIGRFAMsiTIGR00590. pcna. 1 hit.

Sequencei

Sequence statusi: Complete.

Q6XM81-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVEDQEQPTC DGRKLIALLR TSQSTQFKNL CECLKELLTD VNLEFIQDKG
60 70 80 90 100
IRLVSIDPGR VAMVHLVINS VEYFYAQGTV TAGLNMSFLY RMIRCLTSGD
110 120 130 140 150
SMEWRVFEDD PHTMHIELYN NDRRTRTVSS IKLLDLDEVD ISIPEVEYDR
160 170 180 190 200
IVSMPSSELS KHVREMIAVS NYVTVRTTKT TLQFIAEGDM ATSHITIHPT
210 220 230 240 250
ASGLNWKYSD DVVGTIEGKF VVRYLEKFGR VGVEANVELF LKKNFPLILR
260
YELTIGTLRF VIAPVKDA
Length:268
Mass (Da):30,566
Last modified:July 5, 2004 - v1
Checksum:i494AC71291B3E1E8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY225133 Genomic DNA. Translation: AAR26830.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY225133 Genomic DNA. Translation: AAR26830.1.

3D structure databases

ProteinModelPortaliQ6XM81.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

InterProiIPR000730. Pr_cel_nuc_antig.
IPR022649. Pr_cel_nuc_antig_C.
IPR022648. Pr_cel_nuc_antig_N.
[Graphical view]
PANTHERiPTHR11352. PTHR11352. 1 hit.
PfamiPF02747. PCNA_C. 1 hit.
PF00705. PCNA_N. 1 hit.
[Graphical view]
PRINTSiPR00339. PCNACYCLIN.
TIGRFAMsiTIGR00590. pcna. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Comparisons of two large phaeoviral genomes and evolutionary implications."
    Delaroque N., Boland W., Muller D.G., Knippers R.
    J. Mol. Evol. 57:613-622(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: FirrV-1Imported.
  2. "Partial Nucleotide Sequence of the Feldmannia irregularis Virus FirrV-1 Genome: On the Evolution of Large Phaeoviral Genomes."
    Delaroque N., Knippers R., Mueller D.G., Boland W.
    Submitted (JAN-2003) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: FirrV-1Imported.

Entry informationi

Entry nameiQ6XM81_9PHYC
AccessioniPrimary (citable) accession number: Q6XM81
Entry historyi
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: October 29, 2014
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.