Q6XI04 (Q6XI04_DROYA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
60S ribosomal protein L27 RuleBase RU000575

Gene names

Name:	Dyak\GE10675 EMBL EDW98715.1
ORF Names:	Dyak_GE10675 EMBL EDW98715.1, GE10675 FlyBase FBgn0068303

Organism

Drosophila yakuba (Fruit fly) [Complete proteome] EMBL AAR10051.1

Taxonomic identifier

7245 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Protostomia › Ecdysozoa › Panarthropoda › Arthropoda › Mandibulata › Pancrustacea › Hexapoda › Insecta › Dicondylia › Pterygota › Neoptera › Endopterygota › Diptera › Brachycera › Muscomorpha › Eremoneura › Cyclorrhapha › Schizophora › Acalyptratae › Ephydroidea › Drosophilidae › Drosophilinae › Drosophilini › Drosophilina › Drosophiliti › Drosophila › Sophophora › melanogaster group › melanogaster subgroup

Protein attributes

Sequence length	135 AA.
Sequence status	Fragment.
Protein existence	Evidence at transcript level

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein L27e family. RuleBase RU000575

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein RuleBase RU000575
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	translation Inferred from electronic annotation. Source: InterPro
Cellular_component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	1	1	EMBL AAR10051.1
	Non-terminal residue	135	1	EMBL AAR10051.1

Sequences

	Sequence		Length	Mass (Da)
	Q6XI04 [UniParc]. Last modified July 5, 2004. Version 1. Checksum: 1B503E664E77BCD1	FASTA	135	15,903
	10 20 30 40 50 60 MRKIMKQGKI VIVLSGRYAG RKAIIVKTHD DGTPEKPFGH ALVAGIDRYP RKVTKKMGKN 70 80 90 100 110 120 KLKKKSKVKP FLKSLNYNHL MPTRYTAHDI SFEKLSPKDL KDPVKRKTHR FQTRVKFESV 130 YKEGKNKWFF QKLRF

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"An evolutionary analysis of orphan genes in Drosophila." Domazet-Loso T., Tautz D. Genome Res. 13:2213-2219(2003) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
[2]	"The Genome of Drosophila yakuba." The Drosophila yakuba Sequencing Consortium Submitted (APR-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: Tai18E2 EMBL EDW98715.1.
[3]	"Evolution of genes and genomes on the Drosophila phylogeny." Drosophila 12 genomes consortium Nature 450:203-218(2007) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Tai18E2 EMBL EDW98715.1 and Tai18E2 / Tucson 14021-0261.01.
[4]	"Principles of genome evolution in the Drosophila melanogaster species group." Ranz J.M., Maurin D., Chan Y.S., von Grotthuss M., Hillier L.W., Roote J., Ashburner M., Bergman C.M. PLoS Biol. 5:E152-E152(2007) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Tai18E2 EMBL EDW98715.1.
[5]	FlyBase Submitted (JUN-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: Tai18E2 EMBL EDW98715.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AY232028 mRNA. Translation: AAR10051.1. CM000160 Genomic DNA. Translation: EDW98715.1.
RefSeq	XP_002099003.1. XM_002098967.1.
3D structure databases
SMR	Q6XI04. Positions 1-135.
ModBase	Search...
Protein-protein interaction databases
STRING	7245.FBpp0255685.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblMetazoa	FBtr0257193; FBpp0255685; FBgn0068303.
GeneID	6538479.
KEGG	dya:Dyak_GE10675.
Organism-specific databases
FlyBase	FBgn0068303. Dyak\GE10675.
Phylogenomic databases
eggNOG	COG2163.
KO	K02901.
OrthoDB	EOG41C5CR.
Family and domain databases
Gene3D	2.30.30.30. 1 hit.
InterPro	IPR005824. KOW. IPR014722. Rib_L2_dom2. IPR001141. Ribosomal_L27e. IPR018262. Ribosomal_L27e_CS. [Graphical view]
PANTHER	PTHR10497. PTHR10497. 1 hit.
Pfam	PF00467. KOW. 1 hit. PF01777. Ribosomal_L27e. 1 hit. [Graphical view]
ProDom	PD009396. Ribosomal_L27e. 1 hit. [Graphical view] [Entries sharing at least one domain]
SMART	SM00739. KOW. 1 hit. [Graphical view]
PROSITE	PS01107. RIBOSOMAL_L27E. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q6XI04_DROYA

Accession

Primary (citable) accession number: Q6XI04

Entry history

Integrated into UniProtKB/TrEMBL:	July 5, 2004
Last sequence update:	July 5, 2004
Last modified:	May 29, 2013
This is version 51 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)