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Q6WNP1

- Q6WNP1_9NOCA

UniProt

Q6WNP1 - Q6WNP1_9NOCA

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Protein
Submitted name:

Dibenzothiophene desulfurization enzyme C

Gene

dszC

Organism
Rhodococcus sp. XP
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. acyl-CoA dehydrogenase activity Source: InterPro
  2. flavin adenine dinucleotide binding Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Dibenzothiophene desulfurization enzyme CImported
Gene namesi
Name:dszCImported
OrganismiRhodococcus sp. XPImported
Taxonomic identifieri229739 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeNocardiaceaeRhodococcus

Structurei

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4DOYX-ray1.79A/B/C/D/E/F/G/H1-417[»]
ProteinModelPortaliQ6WNP1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Family and domain databases

Gene3Di1.10.540.10. 1 hit.
2.40.110.10. 1 hit.
InterProiIPR013107. Acyl-CoA_DH_C_dom.
IPR006091. Acyl-CoA_Oxase/DH_cen-dom.
IPR009075. AcylCo_DH/oxidase_C.
IPR013786. AcylCoA_DH/ox_N.
IPR009100. AcylCoA_DH/oxidase_NM_dom.
[Graphical view]
PfamiPF08028. Acyl-CoA_dh_2. 1 hit.
PF02770. Acyl-CoA_dh_M. 1 hit.
PF02771. Acyl-CoA_dh_N. 1 hit.
[Graphical view]
SUPFAMiSSF47203. SSF47203. 1 hit.
SSF56645. SSF56645. 1 hit.

Sequencei

Sequence statusi: Fragment.

Q6WNP1-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MTLSPEKQHV RPRDAADNDP VAVARGLAEK WRATAVERDR AGGSATAERE
60 70 80 90 100
DLRASGLLSL LVPREYGGWG ADWPTAIEVV REIAAADGSL GHLFGYHLTN
110 120 130 140 150
APMIELIGSQ EQEEHLYTQI AQNNWWTGNA SSENNSHVLD WKVSATPTED
160 170 180 190 200
GGYVLNGTKH FCSGAKGSDL LFVFGVVQDD SPQQGAIIAA AIPTSRAGVT
210 220 230 240 250
PNDDWAAIGM RQTDSGSTDF HNVKVEPDEV LGAPNAFVLA FIQSERGSLF
260 270 280 290 300
APIAQLIFAN VYLGIAHGAL DAAREYTRTQ ARPWTPAGIQ QATEDPYTIR
310 320 330 340 350
SYGEFTIALQ GADAAAREAA HLLQTVWDKG DALTPEDRGE LMVKVSGVKA
360 370 380 390 400
LATNAALNIS SGVFEVIGAR GTHPRYGFDR FWRNVRTHSL HDPVSYKIAD
410
VGKHTLNGQY PIPGFTS
Length:417
Mass (Da):45,027
Last modified:July 5, 2004 - v1
Checksum:iCDBCFC0054AE2FD0
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei417 – 4171Imported

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AY278323 Genomic DNA. Translation: AAP33510.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AY278323 Genomic DNA. Translation: AAP33510.1 .

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
4DOY X-ray 1.79 A/B/C/D/E/F/G/H 1-417 [» ]
ProteinModelPortali Q6WNP1.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Family and domain databases

Gene3Di 1.10.540.10. 1 hit.
2.40.110.10. 1 hit.
InterProi IPR013107. Acyl-CoA_DH_C_dom.
IPR006091. Acyl-CoA_Oxase/DH_cen-dom.
IPR009075. AcylCo_DH/oxidase_C.
IPR013786. AcylCoA_DH/ox_N.
IPR009100. AcylCoA_DH/oxidase_NM_dom.
[Graphical view ]
Pfami PF08028. Acyl-CoA_dh_2. 1 hit.
PF02770. Acyl-CoA_dh_M. 1 hit.
PF02771. Acyl-CoA_dh_N. 1 hit.
[Graphical view ]
SUPFAMi SSF47203. SSF47203. 1 hit.
SSF56645. SSF56645. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Biodesulfurization in biphasic systems containing organic solvents."
    Tao F., Yu B., Xu P., Ma C.Q.
    Appl. Environ. Microbiol. 72:4604-4609(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: XPImported.
  2. "Crystal structure of DszC from Rhodococcus sp. XP at 1.79 A."
    Liu S., Zhang C., Su T., Wei T., Zhu D., Wang K., Huang Y., Dong Y., Yin K., Xu S., Xu P., Gu L.
    Proteins 82:1708-1720(2014) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (1.79 ANGSTROMS).

Entry informationi

Entry nameiQ6WNP1_9NOCA
AccessioniPrimary (citable) accession number: Q6WNP1
Entry historyi
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: October 29, 2014
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureImported

External Data

Dasty 3