Reviewed,
UniProtKB/Swiss-Prot Q6W0C5 (DPPA3_HUMAN)
Last modified
June 16, 2009.
Version 31.
History...
Clusters with 100%,
90%,
50% identity |
Documents (4) |
Third-party data |
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Names and origin
| Protein names | Recommended name: Developmental pluripotency-associated protein 3 Alternative name(s): Stella-related protein | ||||
| Gene names |
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| Organism | Homo sapiens (Human) | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo |
Protein attributes
| Sequence length | 159 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Evidence at transcript level. |
General annotation (Comments)
| Function | May play a role in maintaining cell pluripotentiality. Ref.1 Ref.2 |
| Subcellular location | |
| Tissue specificity | Low expression in testis, ovary and thymus. Expressed in embryonic stem and carcinoma cells. Highly expressed in testicular germ cell tumors. Ref.1 Ref.2 |
| Developmental stage | Expressed in fetal ovary. Ref.2 |
Ontologies
| Keywords | |
|---|---|
| Cellular component | Cytoplasm Nucleus |
| Coding sequence diversity | Polymorphism |
| Gene Ontology (GO) | |
| Cellular component | cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell nucleusInferred from electronic annotation. Source: UniProtKB-SubCell |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 159 | 159 | Developmental pluripotency-associated protein 3 | PRO_0000239265 | |||||
Natural variations | |||||||||
| Natural variant | 51 | 1 | E → Q: dbSNP rs2024320. | VAR_030533 | |||||
Experimental info | |||||||||
| Sequence conflict | 57 | 1 | S → L in AAO39708. Ref.2 | ||||||
| Sequence conflict | 57 | 1 | S → L in AAH62480. Ref.3 | ||||||
| Sequence conflict | 57 | 1 | S → L in AAI25146. Ref.3 | ||||||
| Sequence conflict | 150 | 1 | G → E in AAO39708. Ref.2 | ||||||
| Sequence conflict | 150 | 1 | G → E in AAH62480. Ref.3 | ||||||
| Sequence conflict | 150 | 1 | G → E in AAI25146. Ref.3 | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Stella is a maternal effect gene required for normal early development in mice." Payer B., Saitou M., Barton S.C., Thresher R., Dixon J.P., Zahn D., Colledge W.H., Carlton M.B., Nakano T., Surani M.A. Curr. Biol. 13:2110-2117(2003) [PubMed: 14654002] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA], FUNCTION, TISSUE SPECIFICITY. |
| [2] | "Human STELLAR, NANOG, and GDF3 genes are expressed in pluripotent cells and map to chromosome 12p13, a hotspot for teratocarcinoma." Clark A.T., Rodriguez R.T., Bodnar M.S., Abeyta M.J., Cedars M.I., Turek P.J., Firpo M.T., Reijo Pera R.A. Stem Cells 22:169-179(2004) [PubMed: 14990856] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA], FUNCTION, DEVELOPMENTAL STAGE, TISSUE SPECIFICITY. Tissue: Testis. |
| [3] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| AY317075 mRNA. Translation: AAQ84110.1. AY230136 mRNA. Translation: AAO39708.1. BC062480 mRNA. Translation: AAH62480.1. BC125145 mRNA. Translation: AAI25146.1. | |
| IPI | IPI00241801. |
| RefSeq | NP_954980.1. |
| UniGene | Hs.131358 Hs.528118 |
3D structure databases | |
| ModBase | Search... |
Proteomic databases | |
| PRIDE | Q6W0C5. |
Genome annotation databases | |
| Ensembl | ENSG00000187569. Homo sapiens. [Contig view] |
| GeneID | 359787. |
| KEGG | hsa:359787. |
Organism-specific databases | |
| GeneCards | GC12P007757. |
| H-InvDB | HIX0036766. HIX0056549. |
| HGNC | HGNC:19199. DPPA3. |
| MIM | 608408. gene. |
| PharmGKB | PA134951641. |
| GenAtlas | Search... |
Phylogenomic databases | |
| HOGENOM | Q6W0C5. |
| HOVERGEN | Q6W0C5. |
| OMA | Q6W0C5. DVETQSR. |
Gene expression databases | |
| Bgee | Q6W0C5. |
| CleanEx | HS_DPPA3. |
| GermOnline | ENSG00000187569. Homo sapiens. |
Family and domain databases | |
| ProtoNet | Search... |
Other Resources | |
| NextBio | 99921. |
| SOURCE | Search... |
Entry information
| Entry name | DPPA3_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q6W0C5 Secondary accession number(s): Q0P5U3, Q6JZS6 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | HPI (Human Proteome Initiative) | ||||||||
Relevant documents
| Human chromosome 12 Human chromosome 12: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |

Clusters with


