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Q6VZL8

- PAP1_CNPV

UniProt

Q6VZL8 - PAP1_CNPV

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Protein
Poly(A) polymerase catalytic subunit
Gene
PAPL, CNPV129
Organism
Canarypox virus (CNPV)
Status
Reviewed - Annotation score: 3 out of 5 - Protein inferred from homologyi

Functioni

Polymerase that creates the 3'-poly(A) tail of mRNA's.

Catalytic activityi

ATP + RNA(n) = diphosphate + RNA(n+1).

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei194 – 1941 By similarity
Active sitei196 – 1961 By similarity

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. polynucleotide adenylyltransferase activity Source: UniProtKB-EC
Complete GO annotation...

GO - Biological processi

  1. mRNA processing Source: UniProtKB-KW
  2. transcription, DNA-templated Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Transferase

Keywords - Biological processi

mRNA processing, Transcription

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Poly(A) polymerase catalytic subunit (EC:2.7.7.19)
Alternative name(s):
Poly(A) polymerase large subunit
Short name:
PAP-L
Gene namesi
Name:PAPL
Ordered Locus Names:CNPV129
OrganismiCanarypox virus (CNPV)
Taxonomic identifieri44088 [NCBI]
Taxonomic lineageiVirusesdsDNA viruses, no RNA stagePoxviridaeChordopoxvirinaeAvipoxvirus
Virus hostiSerinus [TaxID: 9134]

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 472472Poly(A) polymerase catalytic subunit
PRO_0000308926Add
BLAST

Interactioni

Subunit structurei

Heterodimer of a large (catalytic) subunit and a small (regulatory) subunit By similarity.

Structurei

3D structure databases

ProteinModelPortaliQ6VZL8.

Family & Domainsi

Sequence similaritiesi

Family and domain databases

InterProiIPR024231. Pox_polyA_pol_nucTrfase.
IPR004976. Poxvirus_polyA_pol_cat.
IPR024397. Poxvirus_polyA_pol_cat_C.
IPR024398. Poxvirus_polyA_pol_cat_N.
[Graphical view]
PfamiPF03296. Pox_polyA_pol. 1 hit.
PF12629. Pox_polyA_pol_C. 1 hit.
PF12630. Pox_polyA_pol_N. 1 hit.
[Graphical view]
PIRSFiPIRSF015693. VAC-48L_nuct. 1 hit.

Sequencei

Sequence statusi: Complete.

Q6VZL8-1 [UniParc]FASTAAdd to Basket

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MDRRNQITSV IREYLGRNPV PKEYEVLKKQ TLKLSKIINF NKDTFFFLIK    50
KNKYTFFKDL NVSDEEIQER IDEYFTKQRR ARRLGNLLAI VELQKLLVSS 100
FTKTLGVLTT KALEYYPSNI RLDYSFMEKI ADNILDSYNV VKPSEEVKGR 150
HKVSDLVLHV NKIMEEYLRR HSNSCICYGS YSLHLLNKKI EYGDIDILQT 200
NARIFLINIA FLIRFITGRC VVLLKVPFLK NYVVIHDENL NHVMDSFNIK 250
QSTMDKIPKI MIDNMYIVDP CIQLLNTIKM FSQIDRLEDI HTKFDKLSIR 300
LGTLLEYTRY RYSILLDSES ILDVKYKIDI QNRKIILDFK KYNLNYIKCY 350
FFLDEDELKK LIRKTPKTDD YIDLEAVTNS EYMILNKTMY TYFSNTTLLR 400
SKDELHPITI NALTSHALLY HVITKKFYDD LLGDLIRSLM IVEKVPVYEI 450
IPRDKKRGKH TIIDIEKDVV FH 472
Length:472
Mass (Da):56,015
Last modified:July 5, 2004 - v1
Checksum:i5661DB73F7ED3A44
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AY318871 Genomic DNA. Translation: AAR83475.1.
RefSeqiNP_955152.1. NC_005309.1.

Genome annotation databases

GeneIDi2700390.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AY318871 Genomic DNA. Translation: AAR83475.1 .
RefSeqi NP_955152.1. NC_005309.1.

3D structure databases

ProteinModelPortali Q6VZL8.
ModBasei Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 2700390.

Family and domain databases

InterProi IPR024231. Pox_polyA_pol_nucTrfase.
IPR004976. Poxvirus_polyA_pol_cat.
IPR024397. Poxvirus_polyA_pol_cat_C.
IPR024398. Poxvirus_polyA_pol_cat_N.
[Graphical view ]
Pfami PF03296. Pox_polyA_pol. 1 hit.
PF12629. Pox_polyA_pol_C. 1 hit.
PF12630. Pox_polyA_pol_N. 1 hit.
[Graphical view ]
PIRSFi PIRSF015693. VAC-48L_nuct. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Isolate ATCC VR-111 / Wheatley C93.

Entry informationi

Entry nameiPAP1_CNPV
AccessioniPrimary (citable) accession number: Q6VZL8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 23, 2007
Last sequence update: July 5, 2004
Last modified: May 14, 2014
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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