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Q6VYI5 (Q6VYI5_MOUSE) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 86. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length302 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Sequences

Sequence LengthMass (Da)Tools
Q6VYI5 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: D738F23CB5BA3805

FASTA30234,197
        10         20         30         40         50         60 
MSEYIRVTED ENDEPIEIPS EDDGTVLLST VTAQFPGACG LRYRNPVSQC MRGVRLVEGI 

        70         80         90        100        110        120 
LHAPDAGWGN LVYVVNYPKD NKRKMDETDA SSAVKVKRAV QKTSDLIVLG LPWKTTEQDL 

       130        140        150        160        170        180 
KDYFSTFGEV LMVQVKKDLK TGHSKGFGFV RFTEYETQVK VMSQRHMIDG RWCDCKLPNS 

       190        200        210        220        230        240 
KQSPDEPLRS RKVFVGRCTE DMTAEELQQF FCQYGEVVDV FIPKPFRAFA FVTFADDKVA 

       250        260        270        280        290        300 
QSLCGEDLII KGISVHISNA EPKHNSNRQL ERSGRFGGNP GILLSTCFLI QEFVITLHRL 


RL 

« Hide

References

« Hide 'large scale' references
[1]"Structural and Functional Aspects of the Eukaryoyic TDP gene Family."
Shen J.C.K., Wang I.-F., Wang H.-Y.
Submitted (JUN-2003) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[2]"Lineage-specific biology revealed by a finished genome assembly of the mouse."
Church D.M., Goodstadt L., Hillier L.W., Zody M.C., Goldstein S., She X., Bult C.J., Agarwala R., Cherry J.L., DiCuccio M., Hlavina W., Kapustin Y., Meric P., Maglott D., Birtle Z., Marques A.C., Graves T., Zhou S. expand/collapse author list , Teague B., Potamousis K., Churas C., Place M., Herschleb J., Runnheim R., Forrest D., Amos-Landgraf J., Schwartz D.C., Cheng Z., Lindblad-Toh K., Eichler E.E., Ponting C.P.
PLoS Biol. 7:E1000112-E1000112(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: C57BL/6J Ensembl ENSMUSP00000101325 Ensembl ENSMUSP00000101327.
[3]Ensembl
Submitted (FEB-2012) to UniProtKB
Cited for: IDENTIFICATION.
Strain: C57BL/6J Ensembl ENSMUSP00000101325 Ensembl ENSMUSP00000101327.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AL606969 Genomic DNA. No translation available.
AY319515 mRNA. Translation: AAP92690.1.
RefSeqNP_001008546.1. NM_001008546.2.
UniGeneMm.22453.
Mm.378962.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSMUST00000105700; ENSMUSP00000101325; ENSMUSG00000041459.
ENSMUST00000105702; ENSMUSP00000101327; ENSMUSG00000041459.
GeneID230908.
KEGGmmu:230908.
UCSCuc008vvd.1. mouse.

Organism-specific databases

CTD23435.
MGIMGI:2387629. Tardbp.

Phylogenomic databases

GeneTreeENSGT00730000110584.
HOGENOMHOG000254792.
HOVERGENHBG058671.

Gene expression databases

GenevestigatorQ6VYI5.

Family and domain databases

Gene3D3.30.70.330. 2 hits.
InterProIPR012677. Nucleotide-bd_a/b_plait.
IPR000504. RRM_dom.
[Graphical view]
PfamPF00076. RRM_1. 2 hits.
[Graphical view]
SMARTSM00360. RRM. 2 hits.
[Graphical view]
PROSITEPS50102. RRM. 2 hits.
[Graphical view]
ProtoNetSearch...

Other

NextBio380280.
SOURCESearch...

Entry information

Entry nameQ6VYI5_MOUSE
AccessionPrimary (citable) accession number: Q6VYI5
Entry history
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: June 11, 2014
This is version 86 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)