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Protein
Submitted name:

TAR DNA-binding protein 43

Gene

Tardbp

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionRNA-bindingPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
TAR DNA-binding protein 43Imported
Submitted name:
TARDBP S8Imported
Gene namesi
Name:TardbpImported
Synonyms:TARDBPImported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 4

Organism-specific databases

MGIiMGI:2387629 Tardbp

Expressioni

Gene expression databases

BgeeiENSMUSG00000041459

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini104 – 200RRMInterPro annotationAdd BLAST97
Domaini191 – 262RRMInterPro annotationAdd BLAST72

Phylogenomic databases

eggNOGiENOG410IFJS Eukaryota
ENOG410ZYQJ LUCA
GeneTreeiENSGT00900000140835
HOGENOMiHOG000254792
HOVERGENiHBG058671

Family and domain databases

Gene3Di3.30.70.330, 2 hits
InterProiView protein in InterPro
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR035979 RBD_domain_sf
IPR000504 RRM_dom
PfamiView protein in Pfam
PF00076 RRM_1, 2 hits
SMARTiView protein in SMART
SM00360 RRM, 2 hits
SUPFAMiSSF54928 SSF54928, 1 hit
PROSITEiView protein in PROSITE
PS50102 RRM, 2 hits

Sequencei

Sequence statusi: Complete.

Q6VYI5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSEYIRVTED ENDEPIEIPS EDDGTVLLST VTAQFPGACG LRYRNPVSQC
60 70 80 90 100
MRGVRLVEGI LHAPDAGWGN LVYVVNYPKD NKRKMDETDA SSAVKVKRAV
110 120 130 140 150
QKTSDLIVLG LPWKTTEQDL KDYFSTFGEV LMVQVKKDLK TGHSKGFGFV
160 170 180 190 200
RFTEYETQVK VMSQRHMIDG RWCDCKLPNS KQSPDEPLRS RKVFVGRCTE
210 220 230 240 250
DMTAEELQQF FCQYGEVVDV FIPKPFRAFA FVTFADDKVA QSLCGEDLII
260 270 280 290 300
KGISVHISNA EPKHNSNRQL ERSGRFGGNP GILLSTCFLI QEFVITLHRL

RL
Length:302
Mass (Da):34,197
Last modified:July 5, 2004 - v1
Checksum:iD738F23CB5BA3805
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL606969 Genomic DNA No translation available.
AY319515 mRNA Translation: AAP92690.1
RefSeqiNP_001008546.1, NM_001008546.2
UniGeneiMm.22453
Mm.378962

Genome annotation databases

EnsembliENSMUST00000105700; ENSMUSP00000101325; ENSMUSG00000041459
ENSMUST00000105702; ENSMUSP00000101327; ENSMUSG00000041459
GeneIDi230908
UCSCiuc008vvd.1 mouse

Similar proteinsi

Entry informationi

Entry nameiQ6VYI5_MOUSE
AccessioniPrimary (citable) accession number: Q6VYI5
Entry historyiIntegrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: May 23, 2018
This is version 121 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

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