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Q6VN45 (Q6VN45_MACEU) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 41. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:Otx2 EMBL AAQ73531.1
OrganismMacropus eugenii (Tammar wallaby) EMBL AAQ73531.1
Taxonomic identifier9315 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaMetatheriaDiprotodontiaMacropodidaeMacropus

Protein attributes

Sequence length183 AA.
Sequence statusFragment.
Protein existencePredicted

Ontologies

Gene Ontology (GO)
   Biological_processaxon guidance

Inferred from electronic annotation. Source: Ensembl

cell fate specification

Inferred from electronic annotation. Source: Ensembl

diencephalon morphogenesis

Inferred from electronic annotation. Source: Ensembl

dorsal/ventral pattern formation

Inferred from electronic annotation. Source: Ensembl

endoderm development

Inferred from electronic annotation. Source: Ensembl

eye photoreceptor cell fate commitment

Inferred from electronic annotation. Source: Ensembl

inner ear morphogenesis

Inferred from electronic annotation. Source: Ensembl

metencephalon development

Inferred from electronic annotation. Source: Ensembl

midbrain development

Inferred from electronic annotation. Source: Ensembl

primitive streak formation

Inferred from electronic annotation. Source: Ensembl

protein complex assembly

Inferred from electronic annotation. Source: Ensembl

somite rostral/caudal axis specification

Inferred from electronic annotation. Source: Ensembl

   Cellular_componentcytoplasm

Inferred from electronic annotation. Source: Ensembl

growth cone

Inferred from electronic annotation. Source: Ensembl

nucleus

Inferred from electronic annotation. Source: Ensembl

protein complex

Inferred from electronic annotation. Source: Ensembl

   Molecular_functionDNA binding

Inferred from electronic annotation. Source: InterPro

RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription

Inferred from electronic annotation. Source: Ensembl

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL AAQ73531.1
Non-terminal residue1831 EMBL AAQ73531.1

Sequences

Sequence LengthMass (Da)Tools
Q6VN45 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: 2CA0A91D4BFFC941

FASTA18319,241
        10         20         30         40         50         60 
RAKCRQQQQQ QQNGGQNKVR PAKKKSSPVR EVSSESGTSG QFTPPSSTSV PAISSSSAPV 

        70         80         90        100        110        120 
SIWSPASISP LSDPLSTSSS CMQRSYPMTY TQASGYSQGY AGSTSYFGGM DCGSYLTPMH 

       130        140        150        160        170        180 
HQLPGPGATL SPMGTNAVTS HLNQSTASLT TQGYGASSLG FNSTTDCLDY KDQTASWKLN 


FNA 

« Hide

References

[1]"Structural evolution of Otx genes in craniates."
Germot A., Lecointre G., Plouhinec J.L., Le Mentec C., Girardot F., Mazan S.
Mol. Biol. Evol. 18:1668-1678(2001) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[2]"The mammalian Crx genes are highly divergent representatives of the Otx5 gene family, a gnathostome orthology class of orthodenticle-related homeogenes involved in the differentiation of retinal photoreceptors and circadian entrainment."
Plouhinec J.L., Sauka-Spengler T., Germot A., Le Mentec C., Cabana T., Harrison G., Pieau C., Sire J.Y., Veron G., Mazan S.
Mol. Biol. Evol. 20:513-521(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AY337233 Genomic DNA. Translation: AAQ73531.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSMEUT00000000823; ENSMEUP00000000761; ENSMEUG00000000827.
ENSMEUT00000000829; ENSMEUP00000000765; ENSMEUG00000000827.

Phylogenomic databases

GeneTreeENSGT00750000117284.
HOGENOMHOG000082677.
HOVERGENHBG004028.
OrthoDBEOG74J98P.
TreeFamTF351179.

Family and domain databases

InterProIPR003022. Otx2_TF.
IPR003025. Otx_TF.
IPR013851. Otx_TF_C.
[Graphical view]
PfamPF03529. TF_Otx. 1 hit.
[Graphical view]
PRINTSPR01257. OTX2HOMEOBOX.
PR01255. OTXHOMEOBOX.
ProtoNetSearch...

Entry information

Entry nameQ6VN45_MACEU
AccessionPrimary (citable) accession number: Q6VN45
Entry history
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: May 14, 2014
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)