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Protein

Solute carrier family 35 member B1

Gene

Slc35b1

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

Probable sugar transporter.By similarity

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processSugar transport, Transport

Names & Taxonomyi

Protein namesi
Recommended name:
Solute carrier family 35 member B1
Alternative name(s):
UDP-galactose transporter-related protein 1
Short name:
UGTrel1
Gene namesi
Name:Slc35b1
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Unplaced

Organism-specific databases

RGDi727783. Slc35b1.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei12 – 32HelicalSequence analysisAdd BLAST21
Transmembranei51 – 71HelicalSequence analysisAdd BLAST21
Transmembranei85 – 105HelicalSequence analysisAdd BLAST21
Transmembranei136 – 156HelicalSequence analysisAdd BLAST21
Transmembranei168 – 188HelicalSequence analysisAdd BLAST21
Transmembranei210 – 230HelicalSequence analysisAdd BLAST21
Transmembranei243 – 263HelicalSequence analysisAdd BLAST21
Transmembranei285 – 305HelicalSequence analysisAdd BLAST21

Keywords - Cellular componenti

Endoplasmic reticulum, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002133681 – 322Solute carrier family 35 member B1Add BLAST322

Proteomic databases

PaxDbiQ6V7K3.

Expressioni

Gene expression databases

GenevisibleiQ6V7K3. RN.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000006179.

Family & Domainsi

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Motifi318 – 322Di-lysine motif5

Domaini

The di-lysine motif confers endoplasmic reticulum localization for type I membrane proteins.By similarity

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiKOG1580. Eukaryota.
COG0697. LUCA.
HOGENOMiHOG000091197.
HOVERGENiHBG083706.
InParanoidiQ6V7K3.
KOiK15275.
OrthoDBiEOG091G0LP3.
PhylomeDBiQ6V7K3.
TreeFamiTF105967.

Family and domain databases

InterProiView protein in InterPro
IPR013657. UAA.
PfamiView protein in Pfam
PF08449. UAA. 1 hit.

Sequencei

Sequence statusi: Complete.

Q6V7K3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAASRSLVPD RLRLPLCFLG VFVCYFYYGI LQEKITRGKY GEGPKQETFT
60 70 80 90 100
FALTLVFIQC VINAMFAKIL IQFFDTARVD RTRTWLYAAC SVSYVGAMVS
110 120 130 140 150
SNSALQFVNY PTQVLGKSCK PIPVMLLGVT LLKKKYPLAK YLCVLLIVAG
160 170 180 190 200
VALFMYKPKK VVGIEEHTVG FGELLLLLSL TLDGLTGVSQ DHMRAHYQTG
210 220 230 240 250
SNHMMLNINL WSTVLLGAGI LFTGELWEFL SFAERYPTII YNILLFGLTS
260 270 280 290 300
ALGQSFIFMT VVYFGPLTCS IITTTRKFFT ILASVILFAN PISSMQWVGT
310 320
VLVFLGLGLD AKFGKGTKKT SH
Length:322
Mass (Da):35,817
Last modified:July 5, 2004 - v1
Checksum:i0541F88DF0ABE06B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D87991 mRNA. Translation: BAA13527.1.
AY349135 mRNA. Translation: AAQ79836.1.
BC085347 mRNA. Translation: AAH85347.1.
RefSeqiNP_954512.1. NM_199081.1.
UniGeneiRn.124916.

Genome annotation databases

GeneIDi287642.
KEGGirno:287642.
UCSCiRGD:727783. rat.

Similar proteinsi

Entry informationi

Entry nameiS35B1_RAT
AccessioniPrimary (citable) accession number: Q6V7K3
Secondary accession number(s): P70639
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 22, 2005
Last sequence update: July 5, 2004
Last modified: August 30, 2017
This is version 81 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families