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Protein

Solute carrier family 35 member B1

Gene

Slc35b1

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

Probable sugar transporter.By similarity

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Sugar transport, Transport

Names & Taxonomyi

Protein namesi
Recommended name:
Solute carrier family 35 member B1
Alternative name(s):
UDP-galactose transporter-related protein 1
Short name:
UGTrel1
Gene namesi
Name:Slc35b1
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Unplaced

Organism-specific databases

RGDi727783. Slc35b1.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei12 – 3221HelicalSequence analysisAdd
BLAST
Transmembranei51 – 7121HelicalSequence analysisAdd
BLAST
Transmembranei85 – 10521HelicalSequence analysisAdd
BLAST
Transmembranei136 – 15621HelicalSequence analysisAdd
BLAST
Transmembranei168 – 18821HelicalSequence analysisAdd
BLAST
Transmembranei210 – 23021HelicalSequence analysisAdd
BLAST
Transmembranei243 – 26321HelicalSequence analysisAdd
BLAST
Transmembranei285 – 30521HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Endoplasmic reticulum, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 322322Solute carrier family 35 member B1PRO_0000213368Add
BLAST

Proteomic databases

PaxDbiQ6V7K3.

Expressioni

Gene expression databases

GenevisibleiQ6V7K3. RN.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000006179.

Family & Domainsi

Motif

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Motifi318 – 3225Di-lysine motif

Domaini

The di-lysine motif confers endoplasmic reticulum localization for type I membrane proteins.By similarity

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiKOG1580. Eukaryota.
COG0697. LUCA.
HOGENOMiHOG000091197.
HOVERGENiHBG083706.
InParanoidiQ6V7K3.
KOiK15275.
OMAiFVCYFYF.
OrthoDBiEOG7FV3QW.
PhylomeDBiQ6V7K3.
TreeFamiTF105967.

Family and domain databases

InterProiIPR013657. UAA.
[Graphical view]
PfamiPF08449. UAA. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q6V7K3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAASRSLVPD RLRLPLCFLG VFVCYFYYGI LQEKITRGKY GEGPKQETFT
60 70 80 90 100
FALTLVFIQC VINAMFAKIL IQFFDTARVD RTRTWLYAAC SVSYVGAMVS
110 120 130 140 150
SNSALQFVNY PTQVLGKSCK PIPVMLLGVT LLKKKYPLAK YLCVLLIVAG
160 170 180 190 200
VALFMYKPKK VVGIEEHTVG FGELLLLLSL TLDGLTGVSQ DHMRAHYQTG
210 220 230 240 250
SNHMMLNINL WSTVLLGAGI LFTGELWEFL SFAERYPTII YNILLFGLTS
260 270 280 290 300
ALGQSFIFMT VVYFGPLTCS IITTTRKFFT ILASVILFAN PISSMQWVGT
310 320
VLVFLGLGLD AKFGKGTKKT SH
Length:322
Mass (Da):35,817
Last modified:July 5, 2004 - v1
Checksum:i0541F88DF0ABE06B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D87991 mRNA. Translation: BAA13527.1.
AY349135 mRNA. Translation: AAQ79836.1.
BC085347 mRNA. Translation: AAH85347.1.
RefSeqiNP_954512.1. NM_199081.1.
UniGeneiRn.124916.

Genome annotation databases

GeneIDi287642.
KEGGirno:287642.
UCSCiRGD:727783. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D87991 mRNA. Translation: BAA13527.1.
AY349135 mRNA. Translation: AAQ79836.1.
BC085347 mRNA. Translation: AAH85347.1.
RefSeqiNP_954512.1. NM_199081.1.
UniGeneiRn.124916.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000006179.

Proteomic databases

PaxDbiQ6V7K3.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi287642.
KEGGirno:287642.
UCSCiRGD:727783. rat.

Organism-specific databases

CTDi10237.
RGDi727783. Slc35b1.

Phylogenomic databases

eggNOGiKOG1580. Eukaryota.
COG0697. LUCA.
HOGENOMiHOG000091197.
HOVERGENiHBG083706.
InParanoidiQ6V7K3.
KOiK15275.
OMAiFVCYFYF.
OrthoDBiEOG7FV3QW.
PhylomeDBiQ6V7K3.
TreeFamiTF105967.

Miscellaneous databases

PROiQ6V7K3.

Gene expression databases

GenevisibleiQ6V7K3. RN.

Family and domain databases

InterProiIPR013657. UAA.
[Graphical view]
PfamiPF08449. UAA. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Molecular cloning and characterization of a novel isoform of the human UDP-galactose transporter, and of related complementary DNAs belonging to the nucleotide-sugar transporter gene family."
    Ishida N., Miura N., Yoshioka S., Kawakita M.
    J. Biochem. 120:1074-1078(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
  2. "Rattus norvegicus galactose transporter cDNA."
    Rydlova H., Perez-Marquez J.
    Submitted (JUL-2003) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    Strain: Wistar.
  3. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Ovary.

Entry informationi

Entry nameiS35B1_RAT
AccessioniPrimary (citable) accession number: Q6V7K3
Secondary accession number(s): P70639
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 22, 2005
Last sequence update: July 5, 2004
Last modified: June 8, 2016
This is version 75 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.