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Q6UXB1 (IGFL3_HUMAN) Reviewed, UniProtKB/Swiss-Prot

Last modified April 3, 2013. Version 64. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (5) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Insulin growth factor-like family member 3
Gene names
Name:IGFL3
ORF Names:UNQ483/PRO982
OrganismHomo sapiens (Human) [Reference proteome]
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length125 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

Potential ligand of the IGFLR1 cell membrane receptor. Ref.5

Subcellular location

Secreted Probable.

Tissue specificity

Detected in the cerebellum. Ref.1

Sequence similarities

Belongs to the IGFL family.

Ontologies

Keywords
   Cellular componentSecreted
   Coding sequence diversityPolymorphism
   DomainSignal
   Technical termComplete proteome
Direct protein sequencing
Reference proteome
Gene Ontology (GO)
   Cellular_componentextracellular region

Inferred from electronic annotation. Source: UniProtKB-SubCell

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2424 Ref.4
Chain25 – 125101Insulin growth factor-like family member 3
PRO_0000044634

Natural variations

Natural variant661T → S.
Corresponds to variant rs10406448 [ dbSNP | Ensembl ].
VAR_034012

Sequences

Sequence LengthMass (Da)Tools
Q6UXB1 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: 57CE1D166779090D

FASTA12514,198
        10         20         30         40         50         60 
MRPRCCILAL VCWITVFLLQ CSKGTTDAPV GSGLWLCQPT PRCGNKIYNP SEQCCYDDAI 

        70         80         90        100        110        120 
LSLKETRRCG STCTFWPCFE LCCPESFGPQ QKFLVKLRVL GMKSQCHLSP ISRSCTRNRR 


HVLYP 

« Hide

References

« Hide 'large scale' references
[1]"IGFL: a secreted family with conserved cysteine residues and similarities to the IGF superfamily."
Emtage P., Vatta P., Arterburn M., Muller M.W., Park E., Boyle B., Hazell S., Polizotto R., Funk W.D., Tang Y.T.
Genomics 88:513-520(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [MRNA], TISSUE SPECIFICITY.
[2]"The secreted protein discovery initiative (SPDI), a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment."
Clark H.F., Gurney A.L., Abaya E., Baker K., Baldwin D.T., Brush J., Chen J., Chow B., Chui C., Crowley C., Currell B., Deuel B., Dowd P., Eaton D., Foster J.S., Grimaldi C., Gu Q., Hass P.E. expand/collapse author list , Heldens S., Huang A., Kim H.S., Klimowski L., Jin Y., Johnson S., Lee J., Lewis L., Liao D., Mark M.R., Robbie E., Sanchez C., Schoenfeld J., Seshagiri S., Simmons L., Singh J., Smith V., Stinson J., Vagts A., Vandlen R.L., Watanabe C., Wieand D., Woods K., Xie M.-H., Yansura D.G., Yi S., Yu G., Yuan J., Zhang M., Zhang Z., Goddard A.D., Wood W.I., Godowski P.J., Gray A.M.
Genome Res. 13:2265-2270(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
[3]"The DNA sequence and biology of human chromosome 19."
Grimwood J., Gordon L.A., Olsen A.S., Terry A., Schmutz J., Lamerdin J.E., Hellsten U., Goodstein D., Couronne O., Tran-Gyamfi M., Aerts A., Altherr M., Ashworth L., Bajorek E., Black S., Branscomb E., Caenepeel S., Carrano A.V. expand/collapse author list , Caoile C., Chan Y.M., Christensen M., Cleland C.A., Copeland A., Dalin E., Dehal P., Denys M., Detter J.C., Escobar J., Flowers D., Fotopulos D., Garcia C., Georgescu A.M., Glavina T., Gomez M., Gonzales E., Groza M., Hammon N., Hawkins T., Haydu L., Ho I., Huang W., Israni S., Jett J., Kadner K., Kimball H., Kobayashi A., Larionov V., Leem S.-H., Lopez F., Lou Y., Lowry S., Malfatti S., Martinez D., McCready P.M., Medina C., Morgan J., Nelson K., Nolan M., Ovcharenko I., Pitluck S., Pollard M., Popkie A.P., Predki P., Quan G., Ramirez L., Rash S., Retterer J., Rodriguez A., Rogers S., Salamov A., Salazar A., She X., Smith D., Slezak T., Solovyev V., Thayer N., Tice H., Tsai M., Ustaszewska A., Vo N., Wagner M., Wheeler J., Wu K., Xie G., Yang J., Dubchak I., Furey T.S., DeJong P., Dickson M., Gordon D., Eichler E.E., Pennacchio L.A., Richardson P., Stubbs L., Rokhsar D.S., Myers R.M., Rubin E.M., Lucas S.M.
Nature 428:529-535(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[4]"Signal peptide prediction based on analysis of experimentally verified cleavage sites."
Zhang Z., Henzel W.J.
Protein Sci. 13:2819-2824(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: PROTEIN SEQUENCE OF 25-39.
[5]"Murine IGFL and human IGFL1 are induced in inflammatory skin conditions and bind to a novel TNF receptor family member, IGFLR1."
Lobito A.A., Ramani S.R., Tom I., Bazan J.F., Luis E., Fairbrother W.J., Ouyang W., Gonzalez L.C.
J. Biol. Chem. 286:18969-18981(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: FUNCTION.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AY672113 mRNA. Translation: AAT77787.1.
AY358434 mRNA. Translation: AAQ88800.1.
AC007785 Genomic DNA. No translation available.
IPIIPI00397724.
RefSeqNP_997276.1. NM_207393.1.
UniGeneHs.365496.

3D structure databases

ProteinModelPortalQ6UXB1.
ModBaseSearch...

Protein-protein interaction databases

IntActQ6UXB1. 1 interaction.
STRING9606.ENSP00000344860.

Polymorphism databases

DMDM74738197.

Proteomic databases

PaxDbQ6UXB1.
PRIDEQ6UXB1.

Protocols and materials databases

DNASU388555.
StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENST00000341415; ENSP00000344860; ENSG00000188624.
GeneID388555.
KEGGhsa:388555.
UCSCuc002pea.1. human.

Organism-specific databases

CTD388555.
GeneCardsGC19M046627.
HGNCHGNC:32930. IGFL3.
MIM610546. gene.
neXtProtNX_Q6UXB1.
PharmGKBPA147357949.
GenAtlasSearch...

Phylogenomic databases

eggNOGNOG75788.
HOGENOMHOG000113010.
HOVERGENHBG081785.
InParanoidQ6UXB1.
OMACYDDAIL.
OrthoDBEOG4DZ1WX.
PhylomeDBQ6UXB1.

Gene expression databases

BgeeQ6UXB1.
CleanExHS_IGFL3.
GenevestigatorQ6UXB1.

Family and domain databases

ProtoNetSearch...

Other

GenomeRNAi388555.
NextBio102144.
SOURCESearch...

Entry information

Entry nameIGFL3_HUMAN
AccessionPrimary (citable) accession number: Q6UXB1
Entry history
Integrated into UniProtKB/Swiss-Prot: December 20, 2005
Last sequence update: July 5, 2004
Last modified: April 3, 2013
This is version 64 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Relevant documents

Human chromosome 19

Human chromosome 19: entries, gene names and cross-references to MIM

Human entries with polymorphisms or disease mutations

List of human entries with polymorphisms or disease mutations

Human polymorphisms and disease mutations

Index of human polymorphisms and disease mutations

MIM cross-references

Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot

SIMILARITY comments

Index of protein domains and families