Reviewed,
UniProtKB/Swiss-Prot Q6UW10 (SFTA2_HUMAN)
Last modified
January 19, 2010.
Version 49.
History...
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Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents
Names and origin
| Protein names | Recommended name: Surfactant-associated protein 2 Alternative name(s): Surfactant-associated protein G | ||||||
| Gene names |
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| Organism | Homo sapiens (Human) [Complete proteome] | ||||||
| Taxonomic identifier | 9606 [NCBI] | ||||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo |
Protein attributes
| Sequence length | 78 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is further processed into a mature form. |
| Protein existence | Evidence at protein level. |
Ontologies
| Keywords | |
|---|---|
| Cellular component | Secreted |
| Coding sequence diversity | Polymorphism |
| Domain | Signal |
| PTM | Glycoprotein |
| Technical term | Complete proteome Direct protein sequencing |
| Gene Ontology (GO) | |
| Cellular component | extracellular region Inferred from electronic annotation. Source: UniProtKB-SubCell |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Signal peptide | 1 – 19 | 19 | Ref.5 | ||||||
| Chain | 20 – 78 | 59 | Surfactant-associated protein 2 | PRO_0000022610 | |||||
Amino acid modifications | |||||||||
| Glycosylation | 37 | 1 | N-linked (GlcNAc...) Potential | ||||||
Natural variations | |||||||||
| Natural variant | 37 | 1 | N → S: dbSNP rs3131787. | VAR_034423 | |||||
Sequences
References
| « Hide 'large scale' references | |
| [1] | "The secreted protein discovery initiative (SPDI), a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment." Clark H.F., Gurney A.L., Abaya E., Baker K., Baldwin D.T., Brush J., Chen J., Chow B., Chui C., Crowley C., Currell B., Deuel B., Dowd P., Eaton D., Foster J.S., Grimaldi C., Gu Q., Hass P.E. Gray A.M.Genome Res. 13:2265-2270(2003) [PubMed: 12975309] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. |
| [2] | "The DNA sequence and analysis of human chromosome 6." Mungall A.J., Palmer S.A., Sims S.K., Edwards C.A., Ashurst J.L., Wilming L., Jones M.C., Horton R., Hunt S.E., Scott C.E., Gilbert J.G.R., Clamp M.E., Bethel G., Milne S., Ainscough R., Almeida J.P., Ambrose K.D., Andrews T.D. Beck S.Nature 425:805-811(2003) [PubMed: 14574404] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [3] | Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. Venter J.C.Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [4] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Colon. |
| [5] | "Signal peptide prediction based on analysis of experimentally verified cleavage sites." Zhang Z., Henzel W.J. Protein Sci. 13:2819-2824(2004) [PubMed: 15340161] [Abstract] Cited for: PROTEIN SEQUENCE OF 20-34. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AY359057 mRNA. Translation: AAQ89416.1. AL773541 Genomic DNA. Translation: CAX12734.1. AL662854 Genomic DNA. Translation: CAM24843.1. AL669830 Genomic DNA. Translation: CAM25405.1. CR759747 Genomic DNA. Translation: CAQ06765.1. BX927194 Genomic DNA. Translation: CAQ09776.1. CR936875 Genomic DNA. Translation: CAQ10927.1. CH471081 Genomic DNA. Translation: EAX03350.1. BC039677 mRNA. Translation: AAH39677.1. |
| IPI | IPI00409689. |
| RefSeq | NP_995326.1. |
| UniGene | Hs.211267 |
3D structure databases | |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | Q6UW10. |
Genome annotation databases | |
| Ensembl | ENST00000359086; ENSP00000351989; ENSG00000196260; Homo sapiens. [Genome view] ENST00000383539; ENSP00000373031; ENSG00000206465; Homo sapiens. [Genome view] ENST00000429290; ENSP00000390291; ENSG00000230072; Homo sapiens. [Genome view] ENST00000454649; ENSP00000398777; ENSG00000237814; Homo sapiens. [Genome view] ENST00000457919; ENSP00000407762; ENSG00000225454; Homo sapiens. [Genome view] |
| GeneID | 389376. |
| KEGG | hsa:389376. |
| UCSC | uc003nsf.1. human. |
Organism-specific databases | |
| CTD | 389376. |
| GeneCards | GC06M031010. |
| H-InvDB | HIX0032865. HIX0049225. HIX0057817. HIX0058071. |
| HGNC | HGNC:18386. SFTA2. |
| PharmGKB | PA38323. |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | prNOG21763. |
| HOVERGEN | Q6UW10. |
| InParanoid | Q6UW10. |
| OMA | LHHAGSP. |
| OrthoDB | EOG9KD97K. |
| PhylomeDB | Q6UW10. |
Gene expression databases | |
| CleanEx | HS_SFTA2. |
| Genevestigator | Q6UW10. |
| GermOnline | ENSG00000196260. Homo sapiens. |
Family and domain databases | |
| ProtoNet | Search... |
Other Resources | |
| NextBio | 102825. |
Entry information
| Entry name | SFTA2_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q6UW10 Secondary accession number(s): A2ABK7, A2ACH1, B7ZCJ7 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | HPI (Human Proteome Initiative) | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 6 Human chromosome 6: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |

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