Q6UVM3 (KCNT2_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 1, 2013.
Version 91.
History...
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Potassium channel subfamily T member 2 Alternative name(s): Sequence like an intermediate conductance potassium channel subunit Sodium and chloride-activated ATP-sensitive potassium channel Slo2.1 | ||||
| Gene names |
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| Organism | Homo sapiens (Human) [Reference proteome] | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 1135 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Outward rectifying potassium channel. Produces rapidly activating outward rectifier K+ currents. Activated by high intracellular sodium and chloride levels. Channel activity is inhibited by ATP and by inhalation anesthetics, such as isoflurane By similarity. Inhibited upon stimulation of G-protein coupled receptors, such as CHRM1 and GRIA1. Ref.1 Ref.6 |
| Subcellular location | Cell membrane; Multi-pass membrane protein By similarity. |
| Post-translational modification | Phosphorylated by protein kinase C. Phosphorylation of the C-terminal domain inhibits channel activity. Ref.6 |
| Sequence similarities | Belongs to the potassium channel family. Calcium-activated (TC 1.A.1.3) subfamily. KCa4.2/KCNT2 sub-subfamily. [View classification] Contains 1 RCK N-terminal domain. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Ion transport Potassium transport Transport |
| Cellular component | Cell membrane Membrane |
| Coding sequence diversity | Alternative splicing Polymorphism |
| Domain | Transmembrane Transmembrane helix |
| Ligand | ATP-binding Nucleotide-binding Potassium |
| Molecular function | Ion channel Potassium channel |
| PTM | Glycoprotein Phosphoprotein |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Cellular_component | voltage-gated potassium channel complex Inferred from Biological aspect of Ancestor. Source: RefGenome |
| Molecular_function | ATP binding Inferred from electronic annotation. Source: UniProtKB-KW calcium-activated potassium channel activityInferred from Biological aspect of Ancestor. Source: RefGenome voltage-gated potassium channel activityInferred from Biological aspect of Ancestor. Source: RefGenome |
| Complete GO annotation... | |
Alternative products
| This entry describes 4 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: Q6UVM3-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: Q6UVM3-2) The sequence of this isoform differs from the canonical sequence as follows: 760-783: Missing. | ||||||
| Isoform 3 (identifier: Q6UVM3-3) The sequence of this isoform differs from the canonical sequence as follows: 469-518: Missing. 760-783: Missing. 970-970: E → ESRKIASQ | ||||||
| Isoform 4 (identifier: Q6UVM3-4) The sequence of this isoform differs from the canonical sequence as follows: 129-153: Missing. 468-468: Q → QCVCLCCR 760-783: Missing. 970-970: E → ESRKIASQ 1071-1135: DEMNDHQSTL...GQDSREETQL → GMLFKNYCIYGLVISCH |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 1135 | 1135 | Potassium channel subfamily T member 2 | PRO_0000312503 | |||||
Regions | |||||||||
| Topological domain | 1 – 63 | 63 | Cytoplasmic Potential | ||||||
| Transmembrane | 64 – 84 | 21 | Helical; Name=Segment S1; Potential | ||||||
| Topological domain | 85 – 101 | 17 | Extracellular Potential | ||||||
| Transmembrane | 102 – 122 | 21 | Helical; Name=Segment S2; Potential | ||||||
| Topological domain | 123 – 137 | 15 | Cytoplasmic Potential | ||||||
| Transmembrane | 138 – 158 | 21 | Helical; Name=Segment S3; Potential | ||||||
| Topological domain | 159 – 164 | 6 | Extracellular Potential | ||||||
| Transmembrane | 165 – 185 | 21 | Helical; Name=Segment S4; Potential | ||||||
| Topological domain | 186 – 198 | 13 | Cytoplasmic Potential | ||||||
| Transmembrane | 199 – 219 | 21 | Helical; Name=Segment S5; Potential | ||||||
| Topological domain | 220 – 228 | 9 | Extracellular Potential | ||||||
| Intramembrane | 229 – 249 | 21 | Pore-forming; Potential | ||||||
| Topological domain | 250 – 256 | 7 | Extracellular Potential | ||||||
| Transmembrane | 257 – 277 | 21 | Helical; Name=Segment S6; Potential | ||||||
| Topological domain | 278 – 1135 | 858 | Cytoplasmic Potential | ||||||
| Domain | 422 – 543 | 122 | RCK N-terminal | ||||||
| Nucleotide binding | 1025 – 1032 | 8 | ATP Potential | ||||||
Amino acid modifications | |||||||||
| Glycosylation | 99 | 1 | N-linked (GlcNAc...) Potential | ||||||
Natural variations | |||||||||
| Alternative sequence | 129 – 153 | 25 | Missing in isoform 4. | VSP_029852 | |||||
| Alternative sequence | 468 | 1 | Q → QCVCLCCR in isoform 4. | VSP_029853 | |||||
| Alternative sequence | 469 – 518 | 50 | Missing in isoform 3. | VSP_029854 | |||||
| Alternative sequence | 760 – 783 | 24 | Missing in isoform 2, isoform 3 and isoform 4. | VSP_029855 | |||||
| Alternative sequence | 970 | 1 | E → ESRKIASQ in isoform 3 and isoform 4. | VSP_029856 | |||||
| Alternative sequence | 1071 – 1135 | 65 | DEMND…EETQL → GMLFKNYCIYGLVISCH in isoform 4. | VSP_029857 | |||||
| Natural variant | 33 | 1 | V → I in a breast cancer sample; somatic mutation. Ref.7 | VAR_037527 | |||||
| Natural variant | 413 | 1 | C → W. Corresponds to variant rs12738104 [ dbSNP | Ensembl ]. | VAR_037528 | |||||
| Natural variant | 429 | 1 | K → N. Corresponds to variant rs12742082 [ dbSNP | Ensembl ]. | VAR_037529 | |||||
Sequences
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References
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AY359444 mRNA. Translation: AAR06170.1. AK131498 mRNA. Translation: BAD18642.1. BX647852 mRNA. Translation: CAI46099.1. AL358853 AL591604 Genomic DNA. Translation: CAH71957.1.AL358853 AL591604 Genomic DNA. Translation: CAH71958.1.AL591604 AL358853 Genomic DNA. Translation: CAH72932.1.AL591604 AL358853 Genomic DNA. Translation: CAH72933.1.AL138931 AL591604 Genomic DNA. Translation: CAI15623.1.AL138931 AL591604 Genomic DNA. Translation: CAI15624.1.AL139137 AL591604 Genomic DNA. Translation: CAI16091.1.AL139137 AL591604 Genomic DNA. Translation: CAI16092.1.BC103948 mRNA. Translation: AAI03949.1. BC103949 mRNA. Translation: AAI03950.1. BC103950 mRNA. Translation: AAI03951.1. |
| IPI | IPI00398421. IPI00645277. IPI00843803. IPI00876957. |
| RefSeq | NP_940905.2. NM_198503.2. |
| UniGene | Hs.657046. |
3D structure databases | |
| ProteinModelPortal | Q6UVM3. |
| ModBase | Search... |
PTM databases | |
| PhosphoSite | Q6UVM3. |
Polymorphism databases | |
| DMDM | 74749370. |
Proteomic databases | |
| PaxDb | Q6UVM3. |
| PRIDE | Q6UVM3. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000294725; ENSP00000294725; ENSG00000162687. ENST00000367433; ENSP00000356403; ENSG00000162687. |
| GeneID | 343450. |
| KEGG | hsa:343450. |
| UCSC | uc001gtd.1. human. uc001gte.1. human. uc001gtf.1. human. uc001gth.1. human. |
Organism-specific databases | |
| CTD | 343450. |
| GeneCards | GC01M196194. |
| HGNC | HGNC:18866. KCNT2. |
| HPA | HPA051218. |
| MIM | 610044. gene. |
| neXtProt | NX_Q6UVM3. |
| PharmGKB | PA38726. |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | COG1226. |
| HOGENOM | HOG000231460. |
| HOVERGEN | HBG055190. |
| InParanoid | Q6UVM3. |
| KO | K04947. |
| OMA | KTYGRCS. |
| OrthoDB | EOG473PQG. |
| PhylomeDB | Q6UVM3. |
Gene expression databases | |
| ArrayExpress | Q6UVM3. |
| Bgee | Q6UVM3. |
| CleanEx | HS_KCNT2. |
| Genevestigator | Q6UVM3. |
Family and domain databases | |
| Gene3D | 3.40.50.720. 1 hit. |
| InterPro | IPR013099. Ion_trans_2. IPR003929. K_chnl_Ca-activ_BK_asu. IPR016040. NAD(P)-bd_dom. [Graphical view] |
| Pfam | PF03493. BK_channel_a. 1 hit. PF07885. Ion_trans_2. 1 hit. [Graphical view] |
| PROSITE | PS51201. RCK_N. False negative. [Graphical view] |
| ProtoNet | Search... |
Other | |
| GenomeRNAi | 343450. |
| NextBio | 98534. |
| SOURCE | Search... |
Entry information
| Entry name | KCNT2_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q6UVM3 Secondary accession number(s): Q3SY59, Q5VTN1, Q6ZMT3 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 1 Human chromosome 1: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with
