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Q6UTZ2

- MGDG2_ORYSJ

UniProt

Q6UTZ2 - MGDG2_ORYSJ

Protein

Probable monogalactosyldiacylglycerol synthase 2, chloroplastic

Gene

MGD2

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 56 (01 Oct 2014)
      Sequence version 2 (02 Sep 2008)
      Previous versions | rss
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    Functioni

    Involved in the synthesis of the major structural component of photosynthetic membranes.By similarity

    Catalytic activityi

    UDP-alpha-D-galactose + 1,2-diacyl-sn-glycerol = UDP + 3-beta-D-galactosyl-1,2-diacyl-sn-glycerol.

    GO - Molecular functioni

    1. 1,2-diacylglycerol 3-beta-galactosyltransferase activity Source: UniProtKB-EC
    2. carbohydrate binding Source: InterPro

    GO - Biological processi

    1. glycolipid biosynthetic process Source: InterPro
    2. lipid glycosylation Source: InterPro

    Keywords - Molecular functioni

    Glycosyltransferase, Transferase

    Protein family/group databases

    CAZyiGT28. Glycosyltransferase Family 28.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Probable monogalactosyldiacylglycerol synthase 2, chloroplastic (EC:2.4.1.46)
    Short name:
    OsMGD2
    Gene namesi
    Name:MGD2
    Ordered Locus Names:Os08g0299400, LOC_Os08g20420
    ORF Names:OsJ_025729, OSJNBa0063H21.123, OSJNBa0070J19.22, P0045D08.104
    OrganismiOryza sativa subsp. japonica (Rice)
    Taxonomic identifieri39947 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
    ProteomesiUP000000763: Chromosome 8

    Organism-specific databases

    GrameneiQ6UTZ2.

    Subcellular locationi

    GO - Cellular componenti

    1. chloroplast membrane Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Chloroplast, Membrane, Plastid

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Transit peptidei1 – 4242ChloroplastSequence AnalysisAdd
    BLAST
    Chaini43 – 469427Probable monogalactosyldiacylglycerol synthase 2, chloroplasticPRO_0000349429Add
    BLAST

    Proteomic databases

    PaxDbiQ6UTZ2.

    Structurei

    3D structure databases

    ProteinModelPortaliQ6UTZ2.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Compositional bias

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Compositional biasi304 – 3085Poly-Arg

    Sequence similaritiesi

    Belongs to the glycosyltransferase 28 family.Curated

    Keywords - Domaini

    Transit peptide

    Phylogenomic databases

    eggNOGiCOG0707.
    KOiK03715.

    Family and domain databases

    InterProiIPR009695. Diacylglyc_glucosyltr_N.
    IPR007235. Glyco_trans_28_C.
    [Graphical view]
    PfamiPF04101. Glyco_tran_28_C. 1 hit.
    PF06925. MGDG_synth. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    Q6UTZ2-1 [UniParc]FASTAAdd to Basket

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    MVISVATPRR SIRDAVLGGV LGAGGRQLYQ PLRCAFYDGA AGGGLTAALS    50
    EDGAEGGVPL PCGRKTAAAK NVLILMSDTG GGHRASAEAL RDAFRLEFGD 100
    AYQVFVRDLG KEYGGWPLND MERSYKFMIR HVRLWKVAFH GTSPRWVHGM 150
    YLAALAYFYA NEVVAGIMRY NPDIIISVHP LMQHIPLWVL KWQSLHPKVP 200
    FVTVITDLNT CHPTWFHHGV TRCYCPSAEV AKRALLRGLE PSQIRVYGLP 250
    IRPSFCRAVL DKDELRKELD MDPDLPAVLL MGGGEGMGPV EETARALSDE 300
    LYDRRRRRPV GQIVVICGRN QVLRSTLQSS RWNVPVKIRG FEKQMEKWMG 350
    ACDCIITKAG PGTIAEALIR GLPIILNDFI PGQEVGNVPY VVDNGAGVFS 400
    KDPREAARQV ARWFTTHTNE LRRYSLNALK LAQPEAVFDI VKDIHKLQQQ 450
    PATVTRIPYS LTSSFSYSI 469
    Length:469
    Mass (Da):52,123
    Last modified:September 2, 2008 - v2
    Checksum:i391BEC5A85A476FF
    GO

    Sequence cautioni

    The sequence AAQ56578.1 differs from that shown. Reason: Erroneous gene model prediction.
    The sequence BAD30710.1 differs from that shown. Reason: Erroneous gene model prediction.
    The sequence BAD31731.1 differs from that shown. Reason: Erroneous gene model prediction.

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP004458 Genomic DNA. Translation: BAD30710.1. Sequence problems.
    AP005819 Genomic DNA. Translation: BAD31731.1. Sequence problems.
    AY360394 Genomic DNA. Translation: AAQ56578.1. Sequence problems.
    CM000145 Genomic DNA. No translation available.
    AP008214 Genomic DNA. Translation: BAF23401.1.
    AK064148 mRNA. No translation available.
    RefSeqiNP_001061487.1. NM_001068022.1.
    UniGeneiOs.51876.

    Genome annotation databases

    GeneIDi4345212.
    KEGGiosa:4345212.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP004458 Genomic DNA. Translation: BAD30710.1 . Sequence problems.
    AP005819 Genomic DNA. Translation: BAD31731.1 . Sequence problems.
    AY360394 Genomic DNA. Translation: AAQ56578.1 . Sequence problems.
    CM000145 Genomic DNA. No translation available.
    AP008214 Genomic DNA. Translation: BAF23401.1 .
    AK064148 mRNA. No translation available.
    RefSeqi NP_001061487.1. NM_001068022.1.
    UniGenei Os.51876.

    3D structure databases

    ProteinModelPortali Q6UTZ2.
    ModBasei Search...
    MobiDBi Search...

    Protein family/group databases

    CAZyi GT28. Glycosyltransferase Family 28.

    Proteomic databases

    PaxDbi Q6UTZ2.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 4345212.
    KEGGi osa:4345212.

    Organism-specific databases

    Gramenei Q6UTZ2.

    Phylogenomic databases

    eggNOGi COG0707.
    KOi K03715.

    Family and domain databases

    InterProi IPR009695. Diacylglyc_glucosyltr_N.
    IPR007235. Glyco_trans_28_C.
    [Graphical view ]
    Pfami PF04101. Glyco_tran_28_C. 1 hit.
    PF06925. MGDG_synth. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    2. Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    3. "The genomes of Oryza sativa: a history of duplications."
      Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.
      , Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.
      PLoS Biol. 3:266-281(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    4. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA] OF 62-469.
      Strain: cv. Nipponbare.
    5. "The rice annotation project database (RAP-DB): 2008 update."
      The rice annotation project (RAP)
      Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENOME REANNOTATION.
      Strain: cv. Nipponbare.
    6. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
      The rice full-length cDNA consortium
      Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 62-469.
      Strain: cv. Nipponbare.

    Entry informationi

    Entry nameiMGDG2_ORYSJ
    AccessioniPrimary (citable) accession number: Q6UTZ2
    Secondary accession number(s): Q0J6L4, Q69LQ8
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: September 2, 2008
    Last sequence update: September 2, 2008
    Last modified: October 1, 2014
    This is version 56 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Oryza sativa (rice)
      Index of Oryza sativa entries and their corresponding gene designations
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3