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Q6UTZ2

- MGDG2_ORYSJ

UniProt

Q6UTZ2 - MGDG2_ORYSJ

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Protein

Probable monogalactosyldiacylglycerol synthase 2, chloroplastic

Gene

MGD2

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli

Functioni

Involved in the synthesis of the major structural component of photosynthetic membranes.By similarity

Catalytic activityi

UDP-alpha-D-galactose + 1,2-diacyl-sn-glycerol = UDP + 3-beta-D-galactosyl-1,2-diacyl-sn-glycerol.

GO - Molecular functioni

  1. 1,2-diacylglycerol 3-beta-galactosyltransferase activity Source: UniProtKB-EC
  2. carbohydrate binding Source: InterPro

GO - Biological processi

  1. glycolipid biosynthetic process Source: InterPro
  2. lipid glycosylation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Protein family/group databases

CAZyiGT28. Glycosyltransferase Family 28.

Names & Taxonomyi

Protein namesi
Recommended name:
Probable monogalactosyldiacylglycerol synthase 2, chloroplastic (EC:2.4.1.46)
Short name:
OsMGD2
Gene namesi
Name:MGD2
Ordered Locus Names:Os08g0299400, LOC_Os08g20420
ORF Names:OsJ_025729, OSJNBa0063H21.123, OSJNBa0070J19.22, P0045D08.104
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
ProteomesiUP000000763: Chromosome 8

Organism-specific databases

GrameneiQ6UTZ2.

Subcellular locationi

GO - Cellular componenti

  1. chloroplast Source: UniProtKB-KW
  2. membrane Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Chloroplast, Membrane, Plastid

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transit peptidei1 – 4242ChloroplastSequence AnalysisAdd
BLAST
Chaini43 – 469427Probable monogalactosyldiacylglycerol synthase 2, chloroplasticPRO_0000349429Add
BLAST

Proteomic databases

PaxDbiQ6UTZ2.

Expressioni

Gene expression databases

ExpressionAtlasiQ6UTZ2. baseline.

Structurei

3D structure databases

ProteinModelPortaliQ6UTZ2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi304 – 3085Poly-Arg

Sequence similaritiesi

Belongs to the glycosyltransferase 28 family.Curated

Keywords - Domaini

Transit peptide

Phylogenomic databases

eggNOGiCOG0707.
InParanoidiQ6UTZ2.
KOiK03715.

Family and domain databases

InterProiIPR009695. Diacylglyc_glucosyltr_N.
IPR007235. Glyco_trans_28_C.
[Graphical view]
PfamiPF04101. Glyco_tran_28_C. 1 hit.
PF06925. MGDG_synth. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q6UTZ2-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MVISVATPRR SIRDAVLGGV LGAGGRQLYQ PLRCAFYDGA AGGGLTAALS
60 70 80 90 100
EDGAEGGVPL PCGRKTAAAK NVLILMSDTG GGHRASAEAL RDAFRLEFGD
110 120 130 140 150
AYQVFVRDLG KEYGGWPLND MERSYKFMIR HVRLWKVAFH GTSPRWVHGM
160 170 180 190 200
YLAALAYFYA NEVVAGIMRY NPDIIISVHP LMQHIPLWVL KWQSLHPKVP
210 220 230 240 250
FVTVITDLNT CHPTWFHHGV TRCYCPSAEV AKRALLRGLE PSQIRVYGLP
260 270 280 290 300
IRPSFCRAVL DKDELRKELD MDPDLPAVLL MGGGEGMGPV EETARALSDE
310 320 330 340 350
LYDRRRRRPV GQIVVICGRN QVLRSTLQSS RWNVPVKIRG FEKQMEKWMG
360 370 380 390 400
ACDCIITKAG PGTIAEALIR GLPIILNDFI PGQEVGNVPY VVDNGAGVFS
410 420 430 440 450
KDPREAARQV ARWFTTHTNE LRRYSLNALK LAQPEAVFDI VKDIHKLQQQ
460
PATVTRIPYS LTSSFSYSI
Length:469
Mass (Da):52,123
Last modified:September 2, 2008 - v2
Checksum:i391BEC5A85A476FF
GO

Sequence cautioni

The sequence AAQ56578.1 differs from that shown. Reason: Erroneous gene model prediction. Curated
The sequence BAD30710.1 differs from that shown. Reason: Erroneous gene model prediction. Curated
The sequence BAD31731.1 differs from that shown. Reason: Erroneous gene model prediction. Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP004458 Genomic DNA. Translation: BAD30710.1. Sequence problems.
AP005819 Genomic DNA. Translation: BAD31731.1. Sequence problems.
AY360394 Genomic DNA. Translation: AAQ56578.1. Sequence problems.
CM000145 Genomic DNA. No translation available.
AP008214 Genomic DNA. Translation: BAF23401.1.
AK064148 mRNA. No translation available.
RefSeqiNP_001061487.1. NM_001068022.1.
UniGeneiOs.51876.

Genome annotation databases

GeneIDi4345212.
KEGGiosa:4345212.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP004458 Genomic DNA. Translation: BAD30710.1 . Sequence problems.
AP005819 Genomic DNA. Translation: BAD31731.1 . Sequence problems.
AY360394 Genomic DNA. Translation: AAQ56578.1 . Sequence problems.
CM000145 Genomic DNA. No translation available.
AP008214 Genomic DNA. Translation: BAF23401.1 .
AK064148 mRNA. No translation available.
RefSeqi NP_001061487.1. NM_001068022.1.
UniGenei Os.51876.

3D structure databases

ProteinModelPortali Q6UTZ2.
ModBasei Search...
MobiDBi Search...

Protein family/group databases

CAZyi GT28. Glycosyltransferase Family 28.

Proteomic databases

PaxDbi Q6UTZ2.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 4345212.
KEGGi osa:4345212.

Organism-specific databases

Gramenei Q6UTZ2.

Phylogenomic databases

eggNOGi COG0707.
InParanoidi Q6UTZ2.
KOi K03715.

Gene expression databases

ExpressionAtlasi Q6UTZ2. baseline.

Family and domain databases

InterProi IPR009695. Diacylglyc_glucosyltr_N.
IPR007235. Glyco_trans_28_C.
[Graphical view ]
Pfami PF04101. Glyco_tran_28_C. 1 hit.
PF06925. MGDG_synth. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
  2. Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
  3. "The genomes of Oryza sativa: a history of duplications."
    Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.
    , Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.
    PLoS Biol. 3:266-281(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  4. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA] OF 62-469.
    Strain: cv. Nipponbare.
  5. "The rice annotation project database (RAP-DB): 2008 update."
    The rice annotation project (RAP)
    Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: cv. Nipponbare.
  6. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
    The rice full-length cDNA consortium
    Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 62-469.
    Strain: cv. Nipponbare.

Entry informationi

Entry nameiMGDG2_ORYSJ
AccessioniPrimary (citable) accession number: Q6UTZ2
Secondary accession number(s): Q0J6L4, Q69LQ8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 2, 2008
Last sequence update: September 2, 2008
Last modified: October 29, 2014
This is version 57 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3