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Q6UTZ2 (MGDG2_ORYSJ) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 54. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Probable monogalactosyldiacylglycerol synthase 2, chloroplastic

Short name=OsMGD2
EC=2.4.1.46
Gene names
Name:MGD2
Ordered Locus Names:Os08g0299400, LOC_Os08g20420
ORF Names:OsJ_025729, OSJNBa0063H21.123, OSJNBa0070J19.22, P0045D08.104
OrganismOryza sativa subsp. japonica (Rice) [Reference proteome]
Taxonomic identifier39947 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza

Protein attributes

Sequence length469 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at transcript level

General annotation (Comments)

Function

Involved in the synthesis of the major structural component of photosynthetic membranes By similarity.

Catalytic activity

UDP-alpha-D-galactose + 1,2-diacyl-sn-glycerol = UDP + 3-beta-D-galactosyl-1,2-diacyl-sn-glycerol.

Subcellular location

Plastidchloroplast membrane Potential.

Sequence similarities

Belongs to the glycosyltransferase 28 family.

Sequence caution

The sequence AAQ56578.1 differs from that shown. Reason: Erroneous gene model prediction.

The sequence BAD30710.1 differs from that shown. Reason: Erroneous gene model prediction.

The sequence BAD31731.1 differs from that shown. Reason: Erroneous gene model prediction.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Transit peptide1 – 4242Chloroplast Potential
Chain43 – 469427Probable monogalactosyldiacylglycerol synthase 2, chloroplastic
PRO_0000349429

Regions

Compositional bias304 – 3085Poly-Arg

Sequences

Sequence LengthMass (Da)Tools
Q6UTZ2 [UniParc].

Last modified September 2, 2008. Version 2.
Checksum: 391BEC5A85A476FF

FASTA46952,123
        10         20         30         40         50         60 
MVISVATPRR SIRDAVLGGV LGAGGRQLYQ PLRCAFYDGA AGGGLTAALS EDGAEGGVPL 

        70         80         90        100        110        120 
PCGRKTAAAK NVLILMSDTG GGHRASAEAL RDAFRLEFGD AYQVFVRDLG KEYGGWPLND 

       130        140        150        160        170        180 
MERSYKFMIR HVRLWKVAFH GTSPRWVHGM YLAALAYFYA NEVVAGIMRY NPDIIISVHP 

       190        200        210        220        230        240 
LMQHIPLWVL KWQSLHPKVP FVTVITDLNT CHPTWFHHGV TRCYCPSAEV AKRALLRGLE 

       250        260        270        280        290        300 
PSQIRVYGLP IRPSFCRAVL DKDELRKELD MDPDLPAVLL MGGGEGMGPV EETARALSDE 

       310        320        330        340        350        360 
LYDRRRRRPV GQIVVICGRN QVLRSTLQSS RWNVPVKIRG FEKQMEKWMG ACDCIITKAG 

       370        380        390        400        410        420 
PGTIAEALIR GLPIILNDFI PGQEVGNVPY VVDNGAGVFS KDPREAARQV ARWFTTHTNE 

       430        440        450        460 
LRRYSLNALK LAQPEAVFDI VKDIHKLQQQ PATVTRIPYS LTSSFSYSI 

« Hide

References

« Hide 'large scale' references
[1]"Composition and structure of the centromeric region of rice chromosome 8."
Wu J., Yamagata H., Hayashi-Tsugane M., Hijishita S., Fujisawa M., Shibata M., Itoh Y., Nakamura M., Sakaguchi M., Yoshihara R., Kobayashi H., Itoh K., Karasawa W., Yamamoto M., Saji S., Katagiri S., Kanamori H., Namiki N. expand/collapse author list , Katayose Y., Matsumoto T., Sasaki T.
Plant Cell 16:967-976(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
[2]"Sequencing of a rice centromere uncovers active genes."
Nagaki K., Cheng Z., Ouyang S., Talbert P.B., Kim M., Jones K.M., Henikoff S., Buell C.R., Jiang J.
Nat. Genet. 36:138-145(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
[3]"The genomes of Oryza sativa: a history of duplications."
Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L. expand/collapse author list , Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.
PLoS Biol. 3:266-281(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nipponbare.
[4]"The map-based sequence of the rice genome."
International rice genome sequencing project (IRGSP)
Nature 436:793-800(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA] OF 62-469.
Strain: cv. Nipponbare.
[5]"The rice annotation project database (RAP-DB): 2008 update."
The rice annotation project (RAP)
Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: GENOME REANNOTATION.
Strain: cv. Nipponbare.
[6]"Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
The rice full-length cDNA consortium
Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 62-469.
Strain: cv. Nipponbare.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP004458 Genomic DNA. Translation: BAD30710.1. Sequence problems.
AP005819 Genomic DNA. Translation: BAD31731.1. Sequence problems.
AY360394 Genomic DNA. Translation: AAQ56578.1. Sequence problems.
CM000145 Genomic DNA. No translation available.
AP008214 Genomic DNA. Translation: BAF23401.1.
AK064148 mRNA. No translation available.
RefSeqNP_001061487.1. NM_001068022.1.
UniGeneOs.51876.

3D structure databases

ProteinModelPortalQ6UTZ2.
ModBaseSearch...
MobiDBSearch...

Protein family/group databases

CAZyGT28. Glycosyltransferase Family 28.

Proteomic databases

PaxDbQ6UTZ2.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4345212.
KEGGosa:4345212.

Organism-specific databases

GrameneQ6UTZ2.

Phylogenomic databases

eggNOGCOG0707.
KOK03715.
ProtClustDBPLN02605.

Family and domain databases

InterProIPR009695. Diacylglyc_glucosyltr_N.
IPR007235. Glyco_trans_28_C.
[Graphical view]
PfamPF04101. Glyco_tran_28_C. 1 hit.
PF06925. MGDG_synth. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameMGDG2_ORYSJ
AccessionPrimary (citable) accession number: Q6UTZ2
Secondary accession number(s): Q0J6L4, Q69LQ8
Entry history
Integrated into UniProtKB/Swiss-Prot: September 2, 2008
Last sequence update: September 2, 2008
Last modified: April 16, 2014
This is version 54 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Oryza sativa (rice)

Index of Oryza sativa entries and their corresponding gene designations