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Q6UTE6 (Q6UTE6_XENLA) Unreviewed, UniProtKB/TrEMBL

Last modified October 3, 2012. Version 52. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Superoxide dismutase RuleBase RU000414
EC=1.15.1.1 RuleBase RU000414
Gene names
Name:sod2 Xenbase XB-GENE-1000995
OrganismXenopus laevis (African clawed frog) EMBL AAQ63483.1
Taxonomic identifier8355 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Amphibia › Batrachia › Anura › Pipoidea › Pipidae › Xenopodinae › Xenopus › Xenopus

Protein attributes

Sequence length224 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Function

Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity. RuleBase RU000414

Catalytic activity

2 superoxide + 2 H+ = O2 + H2O2. RuleBase RU000414

Sequence similarities

Belongs to the iron/manganese superoxide dismutase family. RuleBase RU004477

Ontologies

Keywords
   Molecular functionOxidoreductase RuleBase RU000414
Gene Ontology (GO)
   Biological_processsuperoxide metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionmetal ion binding

Inferred from electronic annotation. Source: InterPro

superoxide dismutase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q6UTE6 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: BC89B2B91BA61323

FASTA22425,166
        10         20         30         40         50         60 
MLCRLSVCGR GRMRCVPALA YSFCKEKHTL PDLPYDYGAL QPHISAEIMQ LHHSKHHATY 

        70         80         90        100        110        120 
VNNLNITEEK YAEALAKGDV TTQVSLQAAL KFNGGGHINH TIFWTNLSPN GGGEPQGELL 

       130        140        150        160        170        180 
DAIKRDFGSF EKFKEKLNTV SVGVQGSGWG WLGYNKDSNR LQLAACANQD PLQGTTGLIP 

       190        200        210        220 
LLGIDVWEHA YYLQYKNVRP DYLKAIWNVI NWENVTERYQ ASKK

« Hide

References

[1]"ANTICLUSTAL: multiple sequence alignment by antipole clustering and linear approximate 1-median computation."
Di Pietro C., Di Pietro V., Emmanuele G., Ferro A., Maugeri T., Modica E., Pigola G., Pulvirenti A., Purrello M., Ragusa M., Scalia M., Shasha D., Travali S., Zimmitti V.
(In) IEEE COMPUTER SOCIETY BIOINFORMATICS CONFERENCE, pp.0-0, Unknown Publisher (2003)
Cited for: NUCLEOTIDE SEQUENCE.
[2]"In vitro and in silico cloning of Xenopus laevis SOD2 cDNA and its phylogenetic analysis."
Purrello M., Di Pietro C., Ragusa M., Pulvirenti A., Giugno R., Pietro V.D., Emmanuele G., Travali S., Scalia M., Shasha D., Ferro A.
DNA Cell Biol. 24:111-116(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AY362041 mRNA. Translation: AAQ63483.1.
RefSeqNP_001083968.1. NM_001090499.1.
UniGeneXl.23883.

3D structure databases

HSSPHSSP built from PDB template 1AP6 based on UniProtKB P04179.
ProteinModelPortalQ6UTE6.
SMRQ6UTE6. Positions 27-224.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID399216.
KEGGxla:399216.

Organism-specific databases

CTD6648.
XenbaseXB-GENE-1000995. sod2.

Phylogenomic databases

HOVERGENHBG004451.
KOK04564.

Family and domain databases

InterProIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERPTHR11404. PTHR11404. 1 hit.
PfamPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFPIRSF000349. SODismutase. 1 hit.
PRINTSPR01703. MNSODISMTASE.
SUPFAMSSF46609. SODismutase. 1 hit.
SSF54719. SODismutase. 1 hit.
PROSITEPS00088. SOD_MN. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ6UTE6_XENLA
AccessionPrimary (citable) accession number: Q6UTE6
Entry history
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: October 3, 2012
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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