Reviewed,
UniProtKB/Swiss-Prot Q6UB98 (ANR12_HUMAN)
Last modified
November 24, 2009.
Version 57.
History...
Clusters with 100%,
90%,
50% identity |
Documents (5) |
Third-party data |
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Names and origin
| Protein names | Recommended name: Ankyrin repeat domain-containing protein 12 Alternative name(s): Ankyrin repeat-containing cofactor 2 GAC-1 protein | ||||
| Gene names |
| ||||
| Organism | Homo sapiens (Human) [Complete proteome] | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo |
Protein attributes
| Sequence length | 2062 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Evidence at protein level. |
General annotation (Comments)
| Function | May recruit HDACs to the p160 coactivators/nuclear receptor complex to inhibit ligand-dependent transactivation. |
| Subunit structure | Interacts with the PAS region of the p160 coactivators. Ref.3 |
| Subcellular location | |
| Sequence similarities | Contains 3 ANK repeats. |
| Sequence caution | The sequence BAB15014.1 differs from that shown. Reason: Miscellaneous discrepancy. Contaminating sequence. Potential poly-A sequence. |
Ontologies
| Keywords | |
|---|---|
| Cellular component | Nucleus |
| Coding sequence diversity | Alternative splicing Polymorphism |
| Domain | ANK repeat Repeat |
| PTM | Acetylation Phosphoprotein |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Cellular component | nucleus Inferred from electronic annotation. Source: UniProtKB-SubCell |
| Complete GO annotation... | |
Alternative products
| This entry describes 2 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: Q6UB98-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: Q6UB98-2) The sequence of this isoform differs from the canonical sequence as follows: 79-101: Missing. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 2062 | 2062 | Ankyrin repeat domain-containing protein 12 | PRO_0000066908 | |||||
Regions | |||||||||
| Repeat | 184 – 213 | 30 | ANK 1 | ||||||
| Repeat | 217 – 246 | 30 | ANK 2 | ||||||
| Repeat | 250 – 280 | 31 | ANK 3 | ||||||
Amino acid modifications | |||||||||
| Modified residue | 39 | 1 | N6-acetyllysine Ref.10 | ||||||
| Modified residue | 149 | 1 | Phosphoserine Ref.9 | ||||||
| Modified residue | 861 | 1 | Phosphoserine Ref.8 | ||||||
Natural variations | |||||||||
| Alternative sequence | 79 – 101 | 23 | Missing in isoform 2. | VSP_010901 | |||||
| Natural variant | 171 | 1 | S → T | VAR_019425 | |||||
| Natural variant | 277 | 1 | P → A: dbSNP rs2298548. | VAR_026042 | |||||
| Natural variant | 390 | 1 | E → D: dbSNP rs35101529. | VAR_048271 | |||||
| Natural variant | 507 | 1 | T → I: dbSNP rs17498752. | VAR_048272 | |||||
| Natural variant | 531 | 1 | T → S: dbSNP rs7243088. | VAR_048273 | |||||
| Natural variant | 818 | 1 | S → N: dbSNP rs2298546. | VAR_022088 | |||||
| Natural variant | 906 | 1 | K → R: dbSNP rs4798791. Ref.5 | VAR_024173 | |||||
| Natural variant | 998 | 1 | L → S: dbSNP rs34996750. | VAR_048274 | |||||
| Natural variant | 1758 | 1 | S → P: dbSNP rs3744822. | VAR_048275 | |||||
Experimental info | |||||||||
| Sequence conflict | 604 | 1 | E → K in CAH56382. Ref.5 | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "GAC-1 protein containing ankyrin repeats." Ilyin G.P. Submitted (OCT-2000) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1). |
| [2] | "ANKRD11 and ANKRD12 are novel 9kb genes encoding nuclear-located proteins with ankyrin domains." Powell J.A., Settasatian C., Lower K., Callen D.F. Submitted (AUG-2003) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1), VARIANT THR-171, SUBCELLULAR LOCATION. |
| [3] | "Identification of a novel family of ankyrin repeats-containing cofactors for p160 nuclear receptor coactivators." Zhang A., Yeung P.L., Li C.-W., Tsai S.-C., Dinh G.K., Wu X., Li H., Chen J.D. J. Biol. Chem. 279:33799-33805(2004) [PubMed: 15184363] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 2), SUBCELLULAR LOCATION, INTERACTION WITH P160. |
| [4] | Chen J.D. Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases Cited for: SEQUENCE REVISION. |
| [5] | "The full-ORF clone resource of the German cDNA consortium." Bechtel S., Rosenfelder H., Duda A., Schmidt C.P., Ernst U., Wellenreuther R., Mehrle A., Schuster C., Bahr A., Bloecker H., Heubner D., Hoerlein A., Michel G., Wedler H., Koehrer K., Ottenwaelder B., Poustka A., Wiemann S., Schupp I. BMC Genomics 8:399-399(2007) [PubMed: 17974005] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2), VARIANT ARG-906. Tissue: Testis. |
| [6] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed: 14702039] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 1-484, VARIANT THR-171. |
| [7] | "Prediction of the coding sequences of unidentified human genes. XII. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro." Nagase T., Ishikawa K., Suyama M., Kikuno R., Hirosawa M., Miyajima N., Tanaka A., Kotani H., Nomura N., Ohara O. DNA Res. 5:355-364(1998) [PubMed: 10048485] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 1462-2062. Tissue: Brain. |
| [8] | "Phosphoproteome of resting human platelets." Zahedi R.P., Lewandrowski U., Wiesner J., Wortelkamp S., Moebius J., Schuetz C., Walter U., Gambaryan S., Sickmann A. J. Proteome Res. 7:526-534(2008) [PubMed: 18088087] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-861, MASS SPECTROMETRY. Tissue: Platelet. |
| [9] | "A quantitative atlas of mitotic phosphorylation." Dephoure N., Zhou C., Villen J., Beausoleil S.A., Bakalarski C.E., Elledge S.J., Gygi S.P. Proc. Natl. Acad. Sci. U.S.A. 105:10762-10767(2008) [PubMed: 18669648] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-149, MASS SPECTROMETRY. |
| [10] | "Lysine acetylation targets protein complexes and co-regulates major cellular functions." Choudhary C., Kumar C., Gnad F., Nielsen M.L., Rehman M., Walther T., Olsen J.V., Mann M. Science 325:834-840(2009) [PubMed: 19608861] [Abstract] Cited for: ACETYLATION [LARGE SCALE ANALYSIS] AT LYS-39, MASS SPECTROMETRY. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| AF317425 mRNA. Translation: AAG38609.1. AY373757 mRNA. Translation: AAR25662.1. AY533564 mRNA. Translation: AAS45545.2. AL834204 mRNA. Translation: CAH56382.1. AK024808 mRNA. Translation: BAB15014.1. Sequence problems. AB020681 mRNA. Translation: BAA74897.1. | |
| IPI | IPI00448465. IPI00448466. |
| RefSeq | NP_001077094.1. NP_056023.3. |
| UniGene | Hs.464585 |
3D structure databases | |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | Q6UB98. |
PTM databases | |
| PhosphoSite | Q6UB98. |
Proteomic databases | |
| PRIDE | Q6UB98. |
Genome annotation databases | |
| Ensembl | ENST00000262126; ENSP00000262126; ENSG00000101745; Homo sapiens. [Genome view] |
| GeneID | 23253. |
| KEGG | hsa:23253. |
| NMPDR | fig|9606.3.peg.14771. |
| UCSC | uc002knv.2. human. uc002knw.2. human. |
Organism-specific databases | |
| CTD | 23253. |
| GeneCards | GC18P009126. |
| HGNC | HGNC:29135. ANKRD12. |
| MIM | 610616. gene. |
| PharmGKB | PA134899860. |
| HUGE | Search... |
| GenAtlas | Search... |
Phylogenomic databases | |
| HOGENOM | Q6UB98. |
| OMA | EYEFKDD |
| OrthoDB | EOG99CSSX |
Gene expression databases | |
| ArrayExpress | Q6UB98. |
| Bgee | Q6UB98. |
| CleanEx | HS_ANKRD12. |
| Genevestigator | Q6UB98. |
Family and domain databases | |
| InterPro | IPR002110. Ankyrin_rpt. IPR020683. Ankyrin_rpt-contain_dom. [Graphical view] |
| Gene3D | G3DSA:1.25.40.20. ANK. 1 hit. |
| Pfam | PF00023. Ank. 3 hits. [Graphical view] |
| SMART | SM00248. ANK. 3 hits. [Graphical view] |
| PROSITE | PS50297. ANK_REP_REGION. 1 hit. PS50088. ANK_REPEAT. 3 hits. [Graphical view] |
| ProtoNet | Search... |
Other Resources | |
| NextBio | 44963. |
| SOURCE | Search... |
Entry information
| Entry name | ANR12_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q6UB98 Secondary accession number(s): O94951 Q9H784 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | HPI (Human Proteome Initiative) | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 18 Human chromosome 18: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with


