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Q6TXJ6

- Q6TXJ6_RAT

UniProt

Q6TXJ6 - Q6TXJ6_RAT

Protein
Submitted name:

LRRGT00003

Gene

LOC100362727

Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 76 (01 Oct 2014)
      Sequence version 1 (05 Jul 2004)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: InterPro

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal proteinSAAS annotation

    Protein family/group databases

    MEROPSiC67.001.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    LRRGT00003Imported
    Gene namesi
    Name:LOC100362727Imported
    Synonyms:CyldImported
    OrganismiRattus norvegicus (Rat)
    Taxonomic identifieri10116 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

    Organism-specific databases

    RGDi1308346. Cyld.
    2324131. LOC100362727.

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    Keywords - Cellular componenti

    CytoplasmSAAS annotation

    PTM / Processingi

    Proteomic databases

    PRIDEiQ6TXJ6.

    Expressioni

    Gene expression databases

    GenevestigatoriQ6TXJ6.

    Interactioni

    Protein-protein interaction databases

    STRINGi10116.ENSRNOP00000042683.

    Structurei

    3D structure databases

    ProteinModelPortaliQ6TXJ6.
    SMRiQ6TXJ6. Positions 258-283, 285-453.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1890.
    PhylomeDBiQ6TXJ6.
    TreeFamiTF300037.

    Family and domain databases

    HAMAPiMF_03122. Ribosomal_S3Ae_euk.
    InterProiIPR027500. Ribosomal_S1/3_euk.
    IPR001593. Ribosomal_S3Ae.
    [Graphical view]
    PfamiPF01015. Ribosomal_S3Ae. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q6TXJ6-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAVRKNQHPT KGGKKGAKKK VVDPFSKKDW YDVKAPAMFN IRSIRKTLVT    50
    RTQGAKTAPD GLEGRVFEGR LADLQNDEDS FRKVKLNTED VQGKNFHGMD 100
    LTRDRMCSVV KKWQTTMIEA LVDVKTTDGY LLRLFCVGFT KKYNNQIRKI 150
    SYSQVYQIQK KMMEIMTREV QTNDLKEVVN KLILGSIGKD IEKVCQSIHP 200
    LHDVFVRKVK MLKKPKFELG KPMELHGEGG GSHKTTAFGG YLSEVVEENT 250
    PPKMEKEGLE IMIGKKKGIQ GHYNSCYLDS TLFWQCRICG GLAMYECREC 300
    YDDPDISAGK IKQFCKTCST QVHLHPRRLN HTYHPVSLPK DLPDWDWRHG 350
    CIPCQKMELF AVLCIETSHY VAFVKYGKDD SAWLFFDSMA DRDGGQNGFN 400
    IPQVTPCPEV GEYLKMSLED LHSLDSRRIQ GCARRLLCDA YMCMYQSPTM 450
    SLYK 454
    Length:454
    Mass (Da):52,009
    Last modified:July 5, 2004 - v1
    Checksum:i8828E384B9F8F69F
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AY383658 mRNA. Translation: AAQ96216.1.
    UniGeneiRn.128760.
    Rn.168938.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AY383658 mRNA. Translation: AAQ96216.1 .
    UniGenei Rn.128760.
    Rn.168938.

    3D structure databases

    ProteinModelPortali Q6TXJ6.
    SMRi Q6TXJ6. Positions 258-283, 285-453.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 10116.ENSRNOP00000042683.

    Protein family/group databases

    MEROPSi C67.001.

    Proteomic databases

    PRIDEi Q6TXJ6.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Organism-specific databases

    RGDi 1308346. Cyld.
    2324131. LOC100362727.

    Phylogenomic databases

    eggNOGi COG1890.
    PhylomeDBi Q6TXJ6.
    TreeFami TF300037.

    Gene expression databases

    Genevestigatori Q6TXJ6.

    Family and domain databases

    HAMAPi MF_03122. Ribosomal_S3Ae_euk.
    InterProi IPR027500. Ribosomal_S1/3_euk.
    IPR001593. Ribosomal_S3Ae.
    [Graphical view ]
    Pfami PF01015. Ribosomal_S3Ae. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Liver regeneration after PH."
      Xu C.S., Chang C.F., Han H.P., Wang G.P., Chai L.Q., Yuan J.Y., Yang K.J., Zhao L.F., Ma H., Wang L., Wang S.F., Xing X.K., Shen G.M., Shi J.B., Rahman S., Wang Q.N., Zhang J.B.
      Submitted (SEP-2003) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: Sprague-DawleyImported.

    Entry informationi

    Entry nameiQ6TXJ6_RAT
    AccessioniPrimary (citable) accession number: Q6TXJ6
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 5, 2004
    Last sequence update: July 5, 2004
    Last modified: October 1, 2014
    This is version 76 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)