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Q6TXJ6

- Q6TXJ6_RAT

UniProt

Q6TXJ6 - Q6TXJ6_RAT

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Protein
Submitted name:

LRRGT00003

Gene

LOC100362727

Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal proteinSAAS annotation

Protein family/group databases

MEROPSiC67.001.

Names & Taxonomyi

Protein namesi
Submitted name:
LRRGT00003Imported
Gene namesi
Name:LOC100362727Imported
Synonyms:CyldImported
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

Organism-specific databases

RGDi1308346. Cyld.
2324131. LOC100362727.

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

CytoplasmSAAS annotation

PTM / Processingi

Proteomic databases

PRIDEiQ6TXJ6.

Expressioni

Gene expression databases

GenevestigatoriQ6TXJ6.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000042683.

Structurei

3D structure databases

ProteinModelPortaliQ6TXJ6.
SMRiQ6TXJ6. Positions 258-283, 285-453.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1890.
PhylomeDBiQ6TXJ6.
TreeFamiTF300037.

Family and domain databases

HAMAPiMF_03122. Ribosomal_S3Ae_euk.
InterProiIPR027500. Ribosomal_S1/3_euk.
IPR001593. Ribosomal_S3Ae.
[Graphical view]
PfamiPF01015. Ribosomal_S3Ae. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q6TXJ6-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAVRKNQHPT KGGKKGAKKK VVDPFSKKDW YDVKAPAMFN IRSIRKTLVT
60 70 80 90 100
RTQGAKTAPD GLEGRVFEGR LADLQNDEDS FRKVKLNTED VQGKNFHGMD
110 120 130 140 150
LTRDRMCSVV KKWQTTMIEA LVDVKTTDGY LLRLFCVGFT KKYNNQIRKI
160 170 180 190 200
SYSQVYQIQK KMMEIMTREV QTNDLKEVVN KLILGSIGKD IEKVCQSIHP
210 220 230 240 250
LHDVFVRKVK MLKKPKFELG KPMELHGEGG GSHKTTAFGG YLSEVVEENT
260 270 280 290 300
PPKMEKEGLE IMIGKKKGIQ GHYNSCYLDS TLFWQCRICG GLAMYECREC
310 320 330 340 350
YDDPDISAGK IKQFCKTCST QVHLHPRRLN HTYHPVSLPK DLPDWDWRHG
360 370 380 390 400
CIPCQKMELF AVLCIETSHY VAFVKYGKDD SAWLFFDSMA DRDGGQNGFN
410 420 430 440 450
IPQVTPCPEV GEYLKMSLED LHSLDSRRIQ GCARRLLCDA YMCMYQSPTM

SLYK
Length:454
Mass (Da):52,009
Last modified:July 5, 2004 - v1
Checksum:i8828E384B9F8F69F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY383658 mRNA. Translation: AAQ96216.1.
UniGeneiRn.128760.
Rn.168938.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY383658 mRNA. Translation: AAQ96216.1 .
UniGenei Rn.128760.
Rn.168938.

3D structure databases

ProteinModelPortali Q6TXJ6.
SMRi Q6TXJ6. Positions 258-283, 285-453.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 10116.ENSRNOP00000042683.

Protein family/group databases

MEROPSi C67.001.

Proteomic databases

PRIDEi Q6TXJ6.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Organism-specific databases

RGDi 1308346. Cyld.
2324131. LOC100362727.

Phylogenomic databases

eggNOGi COG1890.
PhylomeDBi Q6TXJ6.
TreeFami TF300037.

Gene expression databases

Genevestigatori Q6TXJ6.

Family and domain databases

HAMAPi MF_03122. Ribosomal_S3Ae_euk.
InterProi IPR027500. Ribosomal_S1/3_euk.
IPR001593. Ribosomal_S3Ae.
[Graphical view ]
Pfami PF01015. Ribosomal_S3Ae. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Liver regeneration after PH."
    Xu C.S., Chang C.F., Han H.P., Wang G.P., Chai L.Q., Yuan J.Y., Yang K.J., Zhao L.F., Ma H., Wang L., Wang S.F., Xing X.K., Shen G.M., Shi J.B., Rahman S., Wang Q.N., Zhang J.B.
    Submitted (SEP-2003) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: Sprague-DawleyImported.

Entry informationi

Entry nameiQ6TXJ6_RAT
AccessioniPrimary (citable) accession number: Q6TXJ6
Entry historyi
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: November 26, 2014
This is version 78 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)