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Q6TXJ6 (Q6TXJ6_RAT) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 64. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
LRRGT00003 EMBL AAQ96216.1
Gene names
Name:LOC100362727 RGD 2324131
Synonyms:Cyld RGD 1308346
OrganismRattus norvegicus (Rat)
Taxonomic identifier10116 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Rattus

Protein attributes

Sequence length454 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Ontologies

Gene Ontology (GO)
   Biological_processtranslation

Inferred from electronic annotation. Source: InterPro

   Cellular_componentribosome

Inferred from electronic annotation. Source: InterPro

   Molecular_functionstructural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q6TXJ6 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: 8828E384B9F8F69F

FASTA45452,009
        10         20         30         40         50         60 
MAVRKNQHPT KGGKKGAKKK VVDPFSKKDW YDVKAPAMFN IRSIRKTLVT RTQGAKTAPD 

        70         80         90        100        110        120 
GLEGRVFEGR LADLQNDEDS FRKVKLNTED VQGKNFHGMD LTRDRMCSVV KKWQTTMIEA 

       130        140        150        160        170        180 
LVDVKTTDGY LLRLFCVGFT KKYNNQIRKI SYSQVYQIQK KMMEIMTREV QTNDLKEVVN 

       190        200        210        220        230        240 
KLILGSIGKD IEKVCQSIHP LHDVFVRKVK MLKKPKFELG KPMELHGEGG GSHKTTAFGG 

       250        260        270        280        290        300 
YLSEVVEENT PPKMEKEGLE IMIGKKKGIQ GHYNSCYLDS TLFWQCRICG GLAMYECREC 

       310        320        330        340        350        360 
YDDPDISAGK IKQFCKTCST QVHLHPRRLN HTYHPVSLPK DLPDWDWRHG CIPCQKMELF 

       370        380        390        400        410        420 
AVLCIETSHY VAFVKYGKDD SAWLFFDSMA DRDGGQNGFN IPQVTPCPEV GEYLKMSLED 

       430        440        450 
LHSLDSRRIQ GCARRLLCDA YMCMYQSPTM SLYK

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References

[1]"Liver regeneration after PH."
Xu C.S., Chang C.F., Han H.P., Wang G.P., Chai L.Q., Yuan J.Y., Yang K.J., Zhao L.F., Ma H., Wang L., Wang S.F., Xing X.K., Shen G.M., Shi J.B., Rahman S., Wang Q.N., Zhang J.B.
Submitted (SEP-2003) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Sprague-Dawley EMBL AAQ96216.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AY383658 mRNA. Translation: AAQ96216.1.
IPIIPI00421382.
UniGeneRn.128760.
Rn.168938.

3D structure databases

SMRQ6TXJ6. Positions 258-283, 285-453.
ModBaseSearch...

Protein family/group databases

MEROPSC67.001.

Proteomic databases

PRIDEQ6TXJ6.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Organism-specific databases

RGD1308346. Cyld.
2324131. LOC100362727.

Phylogenomic databases

eggNOGCOG1890.
OrthoDBEOG4HX51Q.

Gene expression databases

GenevestigatorQ6TXJ6.

Family and domain databases

InterProIPR001593. Ribosomal_S3Ae.
[Graphical view]
PfamPF01015. Ribosomal_S3Ae. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ6TXJ6_RAT
AccessionPrimary (citable) accession number: Q6TXJ6
Entry history
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: May 1, 2013
This is version 64 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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