Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

LRRGT00113

Gene

Nars

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
LRRGT00113Imported
Gene namesi
Name:NarsImported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

Organism-specific databases

RGDi1307238. Nars.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Proteomic databases

PRIDEiQ6TUD1.

PTM databases

iPTMnetiQ6TUD1.

Expressioni

Gene expression databases

GenevisibleiQ6TUD1. RN.

Structurei

3D structure databases

ProteinModelPortaliQ6TUD1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini197 – 488292AA_TRNA_LIGASE_IIInterPro annotationAdd
BLAST

Phylogenomic databases

HOGENOMiHOG000226035.
HOVERGENiHBG059844.
KOiK01893.
PhylomeDBiQ6TUD1.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR004364. aa-tRNA-synt_II.
IPR018150. aa-tRNA-synt_II-like.
IPR006195. aa-tRNA-synth_II.
IPR004522. Asn-tRNA-ligase.
IPR002312. Asp/Asn-tRNA-synth_IIb.
IPR012340. NA-bd_OB-fold.
IPR004365. NA-bd_OB_tRNA.
[Graphical view]
PANTHERiPTHR22594. PTHR22594. 1 hit.
PTHR22594:SF16. PTHR22594:SF16. 1 hit.
PfamiPF00152. tRNA-synt_2. 1 hit.
PF01336. tRNA_anti-codon. 1 hit.
[Graphical view]
PRINTSiPR01042. TRNASYNTHASP.
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR00457. asnS. 1 hit.
PROSITEiPS50862. AA_TRNA_LIGASE_II. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q6TUD1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVLAELYVSD REGNDATGDG TKEKPFKTGL KRWDVISKSQ MKNIKKMWHR
60 70 80 90 100
EQMKSDSREK KEVKISALEG YRGQRVKVFG WVHRLRRQGK NLMFLVLRDG
110 120 130 140 150
TGYLQCVLSD DLCQCYNGVV LSTESSVAVY GTLNLTPKGK QAPGGHELSC
160 170 180 190 200
DFWELVGLAP AGGADNLINE ESDVDVQLNN RHMMIRGENM SKILKARSMI
210 220 230 240 250
TRCFRDHFFD RGYCEVTTPT LVQTQVEGGA TLFKLDYFGE EAFLTQSSQL
260 270 280 290 300
YLETCLPALG DVFCIAQSYR AEQSRTRRHL AEFTHVEAEC PFLTFEDLLS
310 320 330 340 350
RLEDLVCDVV DRVLKSPVAS IVYDLNPNFK APKRPFRRMN YSDAIEWLRE
360 370 380 390 400
HDVKKEDGTF YEFGDDIPEA PERLMTDTIN EPILLCRFPV EIKSFYMQRC
410 420 430 440 450
PEDPRLTESV DVLMPNVGEI VGGSMRSWDS EEILEGYKRE GIDPAPYYWY
460 470 480 490
TDQRKYGTCP HGGYGLGLER FLSWILNRYH IRDVCLYPRF LQRCRP
Length:496
Mass (Da):57,156
Last modified:July 5, 2004 - v1
Checksum:i690F4B59C50004FC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY387099 mRNA. Translation: AAQ91069.1.
RefSeqiNP_001020806.2. NM_001025635.2.
NP_001136421.1. NM_001142949.1.
UniGeneiRn.48209.

Genome annotation databases

GeneIDi291556.
KEGGirno:291556.
UCSCiRGD:1307238. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY387099 mRNA. Translation: AAQ91069.1.
RefSeqiNP_001020806.2. NM_001025635.2.
NP_001136421.1. NM_001142949.1.
UniGeneiRn.48209.

3D structure databases

ProteinModelPortaliQ6TUD1.
ModBaseiSearch...
MobiDBiSearch...

PTM databases

iPTMnetiQ6TUD1.

Proteomic databases

PRIDEiQ6TUD1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi291556.
KEGGirno:291556.
UCSCiRGD:1307238. rat.

Organism-specific databases

CTDi4677.
RGDi1307238. Nars.

Phylogenomic databases

HOGENOMiHOG000226035.
HOVERGENiHBG059844.
KOiK01893.
PhylomeDBiQ6TUD1.

Gene expression databases

GenevisibleiQ6TUD1. RN.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR004364. aa-tRNA-synt_II.
IPR018150. aa-tRNA-synt_II-like.
IPR006195. aa-tRNA-synth_II.
IPR004522. Asn-tRNA-ligase.
IPR002312. Asp/Asn-tRNA-synth_IIb.
IPR012340. NA-bd_OB-fold.
IPR004365. NA-bd_OB_tRNA.
[Graphical view]
PANTHERiPTHR22594. PTHR22594. 1 hit.
PTHR22594:SF16. PTHR22594:SF16. 1 hit.
PfamiPF00152. tRNA-synt_2. 1 hit.
PF01336. tRNA_anti-codon. 1 hit.
[Graphical view]
PRINTSiPR01042. TRNASYNTHASP.
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR00457. asnS. 1 hit.
PROSITEiPS50862. AA_TRNA_LIGASE_II. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Liver regeneration after PH."
    Xu C.S., Chang C.F., Han H.P., Wang G.P., Chai L.Q., Yuan J.Y., Yang K.J., Zhao L.F., Ma H., Wang L., Wang S.F., Xing X.K., Shen G.M., Shi J.B., Rahman S., Wang Q.N., Zhang J.B.
    Submitted (SEP-2003) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: Sprague-DawleyImported.

Entry informationi

Entry nameiQ6TUD1_RAT
AccessioniPrimary (citable) accession number: Q6TUD1
Entry historyi
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: June 8, 2016
This is version 89 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.