Q6TRW4 (PDS5B_RAT) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Sister chromatid cohesion protein PDS5 homolog B

Alternative name(s):
Androgen-induced proliferation inhibitor
Androgen-induced prostate proliferative shutoff-associated protein AS3

Gene names

Name:	Pds5b
Synonyms:	Aprin, As3

Organism

Rattus norvegicus (Rat) [Reference proteome]

Taxonomic identifier

10116 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Rattus

Protein attributes

Sequence length	1447 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Function	Regulator of sister chromatid cohesion in mitosis which may stabilize cohesin complex association with chromatin. May couple sister chromatid cohesion during mitosis to DNA replication. Cohesion ensures that chromosome partitioning is accurate in both meiotic and mitotic cells and plays an important role in DNA repair. Plays a role in androgen-induced proliferative arrest in prostate cells. Ref.4
Subunit structure	Interacts with the cohesin complex. Interacts with RAD21; the interaction is direct. Interacts with WAPAL (via FGF motifs) or CDCA5 (via the FGF motif); the interaction is direct, cohesin-dependent and competitive By similarity.
Subcellular location	Nucleus Ref.4.
Tissue specificity	Highly expressed in intact prostate with levels decreasing after castration. Expressed exclusively in prostate cells inhibited from proliferating by long-term androgen exposure. Ref.3
Sequence similarities	Belongs to the PDS5 family. Contains 3 A.T hook DNA-binding domains. Contains 1 HEAT repeat.

Ontologies

Keywords
Biological process	Cell cycle Cell division Mitosis
Cellular component	Nucleus
Coding sequence diversity	Alternative splicing
Domain	Repeat
PTM	Acetylation Phosphoprotein
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	cell division Inferred from electronic annotation. Source: UniProtKB-KW mitotic sister chromatid cohesion Inferred from sequence or structural similarity. Source: UniProtKB negative regulation of cell proliferation Inferred from direct assay Ref.4. Source: UniProtKB
Cellular_component	nucleus Inferred from direct assay Ref.4. Source: UniProtKB
Molecular_function	DNA binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Alternative products

This entry describes 3 isoforms produced by alternative splicing. [Align] [Select]

Isoform 1 Ref.1 (identifier: Q6TRW4-1)

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

Note: Gene prediction based on EST data.

Isoform 2 Ref.2 (identifier: Q6TRW4-2)

The sequence of this isoform differs from the canonical sequence as follows:
     1354-1390: RAESPETSAVESTQSTPQKGRGRPSKTPSPSQPKKNI → S

Isoform 3 Ref.2 (identifier: Q6TRW4-3)

The sequence of this isoform differs from the canonical sequence as follows:
     1207-1208: Missing.

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 1447	1447	Sister chromatid cohesion protein PDS5 homolog B		PRO_0000287426
Regions
	Repeat	383 – 419	37	HEAT
	DNA binding	1247 – 1259	13	A.T hook 1
	DNA binding	1287 – 1299	13	A.T hook 2
	DNA binding	1371 – 1383	13	A.T hook 3
Amino acid modifications
	Modified residue	1136	1	N6-acetyllysine By similarity
	Modified residue	1162	1	Phosphoserine By similarity
	Modified residue	1166	1	Phosphoserine By similarity UniProtKB Q9NTI5
	Modified residue	1176	1	Phosphoserine By similarity
	Modified residue	1182	1	Phosphoserine By similarity
	Modified residue	1191	1	Phosphoserine By similarity
	Modified residue	1257	1	Phosphoserine By similarity UniProtKB Q9NTI5
	Modified residue	1259	1	Phosphoserine By similarity
	Modified residue	1283	1	Phosphoserine By similarity
	Modified residue	1357	1	Phosphoserine By similarity UniProtKB Q9NTI5
	Modified residue	1366	1	Phosphothreonine By similarity
	Modified residue	1369	1	Phosphothreonine By similarity UniProtKB Q9NTI5
	Modified residue	1378	1	Phosphoserine By similarity UniProtKB Q9NTI5
	Modified residue	1380	1	Phosphothreonine By similarity
	Modified residue	1382	1	Phosphoserine By similarity UniProtKB Q9NTI5
Natural variations
	Alternative sequence	1207 – 1208	2	Missing in isoform 3. Ref.2		VSP_052407
	Alternative sequence	1354 – 1390	37	RAESP…PKKNI → S in isoform 2. Ref.2		VSP_052408

Sequences

	Sequence		Length	Mass (Da)
	Isoform 1 [UniParc]. Last modified May 15, 2007. Version 2. Checksum: 9EC8B4A03C320428	FASTA	1,447	164,459
	10 20 30 40 50 60 MAHSKTRTND GKITYPPGVK EISDKISKEE MVRRLKMVVK TFMDMDQDSE EEKELYLNLA 70 80 90 100 110 120 LHLASDFFLK HPDKDVRLLV ACCLADIFRI YAPEAPYTSP DKLKDIFMFI TRQLKGLEDT 130 140 150 160 170 180 KSPQFNRYFY LLENIAWVKS YNICFELEDS NEIFTQLYRT LFSVINNGHN QKVHMHMVDL 190 200 210 220 230 240 MSSIICEGDT VSQELLDTVL VNLVPAHKNL NKQAYDLAKA LLKRTAQAIE PYITNFFNQV 250 260 270 280 290 300 LMLGKTSISD LSEHVFDLIL ELYNIDSHLL LSVLPQLEFK LKSNDNEERL QVVKLLAKMF 310 320 330 340 350 360 GAKDSELASQ NKPLWQCYLG RFNDIHVPIR LECVKFASHC LMNHPDLAKD LTEYLKVRSH 370 380 390 400 410 420 DPEEAIRHDV IVSIVTAAKK DILLVNDHLL NFVRERTLDK RWRVRKEAMM GLAQIYKKYA 430 440 450 460 470 480 LQSAAGKDAA KQICWVKDKL LHIYYQNSID DRLLVERIFA QYMVPHNLET TERMKCLYYL 490 500 510 520 530 540 YATLDLNAVK ALNEMWKCQN LLRHQVKDLL DLIKQPKTDA SVKAIFSKVM VITRNLPDPG 550 560 570 580 590 600 KAQDFMKKFT QVLEDDEKIR KQLEALVSPT CSCKQAEGCV REITKKLGNP KQPTNPFLEM 610 620 630 640 650 660 IKFLLERIAP VHIDTESISA LIKQVNKSID GTADDEDEGV PTDQAIRAGL ELLKVLSFTH 670 680 690 700 710 720 PISFHSAETF ESLLACLKMD DEKVAEAALQ IFKNTGSKIE EDFPHIRSAL LPVLHHKSKK 730 740 750 760 770 780 GPPRQAKYAI HCIHAIFSSK ETQFAQIFEP LHKSLDPSNL EHLITPLVTI GHIALLAPDQ 790 800 810 820 830 840 FAAPLKSLVA TFIVKDLLMN DRLPGKKTTK LWVPDEEVSP ETMVKIQAIK MMVRWLLGMK 850 860 870 880 890 900 NNHSKSGTST LRLLTTILHS DGDLTEQGKI SKPDMSRLRL AAGSAIVKLA QEPCYHEIIT 910 920 930 940 950 960 LEQYQLCALA INDECYQVRQ VFAQKLHKGL SRLRLPLEYM AICALCAKDP VKERRAHARQ 970 980 990 1000 1010 1020 CLVKNITVRR EYLKQHAAVS EKLLSLLPEY VVPYTIHLLA HDPDYVKVQD IEQLKDVKEC 1030 1040 1050 1060 1070 1080 LWFVLEILMA KNENNSHAFI RKMVENIKQT KDAQGPDDTK MNEKLYTVCD VAMNIIMSKS 1090 1100 1110 1120 1130 1140 TTYSLESPKD PVLPARFFTQ PDKNFSNTKN YLPPEMKSFF TPGKPKTANV LGAVNKPLSS 1150 1160 1170 1180 1190 1200 AGKQSQTKSS RMETVSNASS SSNPSSPGRI KGRLDSTEMD HSENEDYTMS SPLPGKKSDK 1210 1220 1230 1240 1250 1260 REDSDLVRSE LEKPRSRKKA SVTDPEEKLG MDDLSKLVQE QKPKGSQRGR KRGHAASESE 1270 1280 1290 1300 1310 1320 EQQWPEEKRH KEELLGNEDE QNSPPKKGKR GRPPKPLGGT SKEEPVVKTS KKGNKKKPAP 1330 1340 1350 1360 1370 1380 PVVDEDEEEE RQMGNTEQKS KSKQQRTSKR AQQRAESPET SAVESTQSTP QKGRGRPSKT 1390 1400 1410 1420 1430 1440 PSPSQPKKNI RVGRSKQVAT KENDSSEEMD VLQASSPVSD DTTQEGAEEE DISAGNVRRR SSKRERR
	Isoform 2 [UniParc]. Checksum: 74871AAFFA93E1ED	FASTA	1,411	160,614
	10 20 30 40 50 60 MAHSKTRTND GKITYPPGVK EISDKISKEE MVRRLKMVVK TFMDMDQDSE EEKELYLNLA 70 80 90 100 110 120 LHLASDFFLK HPDKDVRLLV ACCLADIFRI YAPEAPYTSP DKLKDIFMFI TRQLKGLEDT 130 140 150 160 170 180 KSPQFNRYFY LLENIAWVKS YNICFELEDS NEIFTQLYRT LFSVINNGHN QKVHMHMVDL 190 200 210 220 230 240 MSSIICEGDT VSQELLDTVL VNLVPAHKNL NKQAYDLAKA LLKRTAQAIE PYITNFFNQV 250 260 270 280 290 300 LMLGKTSISD LSEHVFDLIL ELYNIDSHLL LSVLPQLEFK LKSNDNEERL QVVKLLAKMF 310 320 330 340 350 360 GAKDSELASQ NKPLWQCYLG RFNDIHVPIR LECVKFASHC LMNHPDLAKD LTEYLKVRSH 370 380 390 400 410 420 DPEEAIRHDV IVSIVTAAKK DILLVNDHLL NFVRERTLDK RWRVRKEAMM GLAQIYKKYA 430 440 450 460 470 480 LQSAAGKDAA KQICWVKDKL LHIYYQNSID DRLLVERIFA QYMVPHNLET TERMKCLYYL 490 500 510 520 530 540 YATLDLNAVK ALNEMWKCQN LLRHQVKDLL DLIKQPKTDA SVKAIFSKVM VITRNLPDPG 550 560 570 580 590 600 KAQDFMKKFT QVLEDDEKIR KQLEALVSPT CSCKQAEGCV REITKKLGNP KQPTNPFLEM 610 620 630 640 650 660 IKFLLERIAP VHIDTESISA LIKQVNKSID GTADDEDEGV PTDQAIRAGL ELLKVLSFTH 670 680 690 700 710 720 PISFHSAETF ESLLACLKMD DEKVAEAALQ IFKNTGSKIE EDFPHIRSAL LPVLHHKSKK 730 740 750 760 770 780 GPPRQAKYAI HCIHAIFSSK ETQFAQIFEP LHKSLDPSNL EHLITPLVTI GHIALLAPDQ 790 800 810 820 830 840 FAAPLKSLVA TFIVKDLLMN DRLPGKKTTK LWVPDEEVSP ETMVKIQAIK MMVRWLLGMK 850 860 870 880 890 900 NNHSKSGTST LRLLTTILHS DGDLTEQGKI SKPDMSRLRL AAGSAIVKLA QEPCYHEIIT 910 920 930 940 950 960 LEQYQLCALA INDECYQVRQ VFAQKLHKGL SRLRLPLEYM AICALCAKDP VKERRAHARQ 970 980 990 1000 1010 1020 CLVKNITVRR EYLKQHAAVS EKLLSLLPEY VVPYTIHLLA HDPDYVKVQD IEQLKDVKEC 1030 1040 1050 1060 1070 1080 LWFVLEILMA KNENNSHAFI RKMVENIKQT KDAQGPDDTK MNEKLYTVCD VAMNIIMSKS 1090 1100 1110 1120 1130 1140 TTYSLESPKD PVLPARFFTQ PDKNFSNTKN YLPPEMKSFF TPGKPKTANV LGAVNKPLSS 1150 1160 1170 1180 1190 1200 AGKQSQTKSS RMETVSNASS SSNPSSPGRI KGRLDSTEMD HSENEDYTMS SPLPGKKSDK 1210 1220 1230 1240 1250 1260 REDSDLVRSE LEKPRSRKKA SVTDPEEKLG MDDLSKLVQE QKPKGSQRGR KRGHAASESE 1270 1280 1290 1300 1310 1320 EQQWPEEKRH KEELLGNEDE QNSPPKKGKR GRPPKPLGGT SKEEPVVKTS KKGNKKKPAP 1330 1340 1350 1360 1370 1380 PVVDEDEEEE RQMGNTEQKS KSKQQRTSKR AQQSRVGRSK QVATKENDSS EEMDVLQASS 1390 1400 1410 PVSDDTTQEG AEEEDISAGN VRRRSSKRER R
	Isoform 3 [UniParc]. Checksum: 5C63A886EC3E7C8F	FASTA	1,445	164,204
	10 20 30 40 50 60 MAHSKTRTND GKITYPPGVK EISDKISKEE MVRRLKMVVK TFMDMDQDSE EEKELYLNLA 70 80 90 100 110 120 LHLASDFFLK HPDKDVRLLV ACCLADIFRI YAPEAPYTSP DKLKDIFMFI TRQLKGLEDT 130 140 150 160 170 180 KSPQFNRYFY LLENIAWVKS YNICFELEDS NEIFTQLYRT LFSVINNGHN QKVHMHMVDL 190 200 210 220 230 240 MSSIICEGDT VSQELLDTVL VNLVPAHKNL NKQAYDLAKA LLKRTAQAIE PYITNFFNQV 250 260 270 280 290 300 LMLGKTSISD LSEHVFDLIL ELYNIDSHLL LSVLPQLEFK LKSNDNEERL QVVKLLAKMF 310 320 330 340 350 360 GAKDSELASQ NKPLWQCYLG RFNDIHVPIR LECVKFASHC LMNHPDLAKD LTEYLKVRSH 370 380 390 400 410 420 DPEEAIRHDV IVSIVTAAKK DILLVNDHLL NFVRERTLDK RWRVRKEAMM GLAQIYKKYA 430 440 450 460 470 480 LQSAAGKDAA KQICWVKDKL LHIYYQNSID DRLLVERIFA QYMVPHNLET TERMKCLYYL 490 500 510 520 530 540 YATLDLNAVK ALNEMWKCQN LLRHQVKDLL DLIKQPKTDA SVKAIFSKVM VITRNLPDPG 550 560 570 580 590 600 KAQDFMKKFT QVLEDDEKIR KQLEALVSPT CSCKQAEGCV REITKKLGNP KQPTNPFLEM 610 620 630 640 650 660 IKFLLERIAP VHIDTESISA LIKQVNKSID GTADDEDEGV PTDQAIRAGL ELLKVLSFTH 670 680 690 700 710 720 PISFHSAETF ESLLACLKMD DEKVAEAALQ IFKNTGSKIE EDFPHIRSAL LPVLHHKSKK 730 740 750 760 770 780 GPPRQAKYAI HCIHAIFSSK ETQFAQIFEP LHKSLDPSNL EHLITPLVTI GHIALLAPDQ 790 800 810 820 830 840 FAAPLKSLVA TFIVKDLLMN DRLPGKKTTK LWVPDEEVSP ETMVKIQAIK MMVRWLLGMK 850 860 870 880 890 900 NNHSKSGTST LRLLTTILHS DGDLTEQGKI SKPDMSRLRL AAGSAIVKLA QEPCYHEIIT 910 920 930 940 950 960 LEQYQLCALA INDECYQVRQ VFAQKLHKGL SRLRLPLEYM AICALCAKDP VKERRAHARQ 970 980 990 1000 1010 1020 CLVKNITVRR EYLKQHAAVS EKLLSLLPEY VVPYTIHLLA HDPDYVKVQD IEQLKDVKEC 1030 1040 1050 1060 1070 1080 LWFVLEILMA KNENNSHAFI RKMVENIKQT KDAQGPDDTK MNEKLYTVCD VAMNIIMSKS 1090 1100 1110 1120 1130 1140 TTYSLESPKD PVLPARFFTQ PDKNFSNTKN YLPPEMKSFF TPGKPKTANV LGAVNKPLSS 1150 1160 1170 1180 1190 1200 AGKQSQTKSS RMETVSNASS SSNPSSPGRI KGRLDSTEMD HSENEDYTMS SPLPGKKSDK 1210 1220 1230 1240 1250 1260 REDSDLSELE KPRSRKKASV TDPEEKLGMD DLSKLVQEQK PKGSQRGRKR GHAASESEEQ 1270 1280 1290 1300 1310 1320 QWPEEKRHKE ELLGNEDEQN SPPKKGKRGR PPKPLGGTSK EEPVVKTSKK GNKKKPAPPV 1330 1340 1350 1360 1370 1380 VDEDEEEERQ MGNTEQKSKS KQQRTSKRAQ QRAESPETSA VESTQSTPQK GRGRPSKTPS 1390 1400 1410 1420 1430 1440 PSQPKKNIRV GRSKQVATKE NDSSEEMDVL QASSPVSDDT TQEGAEEEDI SAGNVRRRSS KRERR

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Genome sequence of the Brown Norway rat yields insights into mammalian evolution." Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M. , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S. Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Brown Norway.
[2]	"Aprin expression in rat olfactory epithelium." Weiler E., Farbman A.I. Submitted (SEP-2003) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 42-283, NUCLEOTIDE SEQUENCE [MRNA] OF 1110-1378 (ISOFORM 1), NUCLEOTIDE SEQUENCE [MRNA] OF 1110-1264 (ISOFORM 3), NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1327-1381 (ISOFORM 1), NUCLEOTIDE SEQUENCE [MRNA] OF 1334-1420 (ISOFORM 2). Strain: Sprague-Dawley and Wistar. Tissue: Liver and Testis.
[3]	"Expression of novel genes linked to the androgen-induced, proliferative shutoff in prostate cancer cells." Geck P., Szelei J., Jimenez J., Lin T.-M., Sonnenschein C., Soto A.M. J. Steroid Biochem. Mol. Biol. 63:211-218(1997) [PubMed] [Europe PMC] [Abstract] Cited for: TISSUE SPECIFICITY.
[4]	"Mechanism of androgen action on cell proliferation: AS3 protein as a mediator of proliferative arrest in the rat prostate." Maffini M.V., Geck P., Powell C.E., Sonnenschein C., Soto A.M. Endocrinology 143:2708-2714(2002) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION, SUBCELLULAR LOCATION.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AABR03082233 Genomic DNA. No translation available. AABR03082545 Genomic DNA. No translation available. AY388627 mRNA. Translation: AAQ91374.1. AY820182 mRNA. Translation: AAV68352.1. AY820183 mRNA. Translation: AAV68353.1. AY831451 Genomic DNA. Translation: AAW69306.1. AY831452 mRNA. Translation: AAW69307.1. AY836673 mRNA. Translation: AAW69308.1.
IPI	IPI00515846. IPI00562353. IPI00764370.
UniGene	Rn.105768.
3D structure databases
ProteinModelPortal	Q6TRW4.
ModBase	Search...
PTM databases
PhosphoSite	Q6TRW4.
Proteomic databases
PaxDb	Q6TRW4.
PRIDE	Q6TRW4.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
UCSC	RGD:1310838. rat.
Organism-specific databases
RGD	1310838. Pds5b.
Phylogenomic databases
eggNOG	NOG268017.
HOGENOM	HOG000230672.
HOVERGEN	HBG108241.
Gene expression databases
ArrayExpress	Q6TRW4.
Genevestigator	Q6TRW4.
Family and domain databases
Gene3D	1.25.10.10. 4 hits.
InterPro	IPR011989. ARM-like. IPR016024. ARM-type_fold. IPR017956. AT_hook_DNA-bd_motif. [Graphical view]
SMART	SM00384. AT_hook. 2 hits. [Graphical view]
SUPFAM	SSF48371. ARM-type_fold. 1 hit.
PROSITE	PS50077. HEAT_REPEAT. False negative. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

PDS5B_RAT

Accession

Primary (citable) accession number: Q6TRW4
Secondary accession number(s): Q5G5U1 , Q5G6V7, Q5G6V8, Q5PY35, Q5PY36

Entry history

Integrated into UniProtKB/Swiss-Prot:	May 15, 2007
Last sequence update:	May 15, 2007
Last modified:	April 3, 2013
This is version 52 of the entry and version 2 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Chordata Protein Annotation Program