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Protein
Submitted name:

Cytochrome c oxidase subunit IV isoform 1

Gene

cox4i1

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Cytochrome c oxidase subunit IV isoform 1Imported
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:cox4i1Imported
Synonyms:COX4I1Imported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
Proteomesi
  • UP000000437 Componenti: Chromosome 18

Organism-specific databases

ZFINiZDB-GENE-030131-5175. cox4i1.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei102 – 120HelicalSequence analysisAdd BLAST19

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Expressioni

Gene expression databases

BgeeiENSDARG00000032970.

Interactioni

Protein-protein interaction databases

STRINGi7955.ENSDARP00000007446.

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG4075. Eukaryota.
ENOG4111T97. LUCA.
GeneTreeiENSGT00390000002407.
HOVERGENiHBG051087.
KOiK02263.
OMAiEKHYVYG.
OrthoDBiEOG091G0XDH.
TreeFamiTF105061.

Family and domain databases

CDDicd00922. Cyt_c_Oxidase_IV. 1 hit.
Gene3Di1.10.442.10. 1 hit.
InterProiIPR013288. Cyt_c_oxidase_su4.
IPR004203. Cyt_c_oxidase_su4_fam.
[Graphical view]
PANTHERiPTHR10707. PTHR10707. 1 hit.
PfamiPF02936. COX4. 1 hit.
[Graphical view]
PRINTSiPR01873. CYTCOXIDASE4.
SUPFAMiSSF81406. SSF81406. 1 hit.

Sequencei

Sequence statusi: Complete.

Q6TNV0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLATTAFRLV GKRALSTSIC LRGAHGVAKV EDYSLPAYFD RRESPLPEIK
60 70 80 90 100
FVQQLSADQK SLKEKEKGSW AALSKEEKIA LYRISFKESF AEMNQGSGEW
110 120 130 140 150
KSVVAGIFFF VGLTGLVVLW QRKYVYGDVP NTFDPEYKQK EIQRMLDMRI
160
NPVQGFAAKW DYENNAWKK
Length:169
Mass (Da):19,385
Last modified:July 5, 2004 - v1
Checksum:iF507A65814905FC2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX548023 Genomic DNA. No translation available.
AY391417 mRNA. Translation: AAQ91229.1.
RefSeqiNP_999866.1. NM_214701.1.
UniGeneiDr.76095.

Genome annotation databases

EnsembliENSDART00000026866; ENSDARP00000007446; ENSDARG00000032970.
GeneIDi326975.
KEGGidre:326975.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX548023 Genomic DNA. No translation available.
AY391417 mRNA. Translation: AAQ91229.1.
RefSeqiNP_999866.1. NM_214701.1.
UniGeneiDr.76095.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi7955.ENSDARP00000007446.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSDART00000026866; ENSDARP00000007446; ENSDARG00000032970.
GeneIDi326975.
KEGGidre:326975.

Organism-specific databases

CTDi1327.
ZFINiZDB-GENE-030131-5175. cox4i1.

Phylogenomic databases

eggNOGiKOG4075. Eukaryota.
ENOG4111T97. LUCA.
GeneTreeiENSGT00390000002407.
HOVERGENiHBG051087.
KOiK02263.
OMAiEKHYVYG.
OrthoDBiEOG091G0XDH.
TreeFamiTF105061.

Gene expression databases

BgeeiENSDARG00000032970.

Family and domain databases

CDDicd00922. Cyt_c_Oxidase_IV. 1 hit.
Gene3Di1.10.442.10. 1 hit.
InterProiIPR013288. Cyt_c_oxidase_su4.
IPR004203. Cyt_c_oxidase_su4_fam.
[Graphical view]
PANTHERiPTHR10707. PTHR10707. 1 hit.
PfamiPF02936. COX4. 1 hit.
[Graphical view]
PRINTSiPR01873. CYTCOXIDASE4.
SUPFAMiSSF81406. SSF81406. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ6TNV0_DANRE
AccessioniPrimary (citable) accession number: Q6TNV0
Entry historyi
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: November 2, 2016
This is version 92 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.