Q6TNS1 (Q6TNS1_DANRE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Novel protein (Id:ibd2873) EMBL CAK10942.1

Submitted name:
Par-6 partitioning defective 6 homolog gamma B (C. elegans) Ensembl ENSDARP00000052392
Submitted name:
Par-6 partitioning defective 6-like protein gamma EMBL AAQ91258.1

Gene names

Name:	pard6gb Ensembl ENSDARP00000052392 ZFIN ZDB-GENE-010319-35
Synonyms:	DKEY-202E17.7 EMBL CAK10942.1, id:ibd2873 ZFIN ZDB-GENE-010319-35, PARD6G EMBL AAQ91258.1
ORF Names:	DKEY-202E17.7-001 EMBL CAK10942.1

Organism

Danio rerio (Zebrafish) (Brachydanio rerio) EMBL AAQ91258.1

Taxonomic identifier

7955 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Actinopterygii › Neopterygii › Teleostei › Ostariophysi › Cypriniformes › Cyprinidae › Danio

Protein attributes

Sequence length	434 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Sequence similarities

Contains 1 PDZ (DHR) domain. RuleBase RU003354

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	apical protein localization Inferred from genetic interaction. Source: ZFIN cloaca development Inferred from mutant phenotype. Source: ZFIN embryonic heart tube development Inferred from mutant phenotype. Source: ZFIN neural tube formation Inferred from mutant phenotype. Source: ZFIN pronephros development Inferred from mutant phenotype. Source: ZFIN
Cellular component	apical plasma membrane Inferred from direct assay. Source: ZFIN cleavage furrow Inferred from direct assay. Source: ZFIN cytoplasm Inferred from direct assay. Source: ZFIN nucleus Inferred from direct assay. Source: ZFIN
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q6TNS1 [UniParc]. Last modified July 5, 2004. Version 1. Checksum: 73502EC0374C7537	FASTA	434	48,018
	10 20 30 40 50 60 MNRSFNKSQS LRSLNMNAVE VKSKYGAEFR RFSVDRIKPG KFEEFYKLIM TIHRIANMEV 70 80 90 100 110 120 MIGYADIHGD LLPINNDENF SKAVSTAHPL LRIFIQRQEE VDYSNFGTST LTRKKKAVVT 130 140 150 160 170 180 LRNDLNRKRP HIRIGMPQDF RPVSSIIDVD ILPESHRRVR LYRYGSDKPL GFYIRDGTSV 190 200 210 220 230 240 RVTPHGLEKV PGIFISRMVP GGLAESTGLL AVNDEVLEVN GIEVTGKTLD QVTDMMIANS 250 260 270 280 290 300 HNLIVTVKPV NQRNNVVRSS RISGSSGQSS DSSGSVGYPA ITVPTGATAI SHGYSPEDLE 310 320 330 340 350 360 SDEESDIVIE SNIKRPSRRS NASVASNASR SQTQTTTVTP PSPPTRPQTR PPSTVSTASF 370 380 390 400 410 420 HSQPSFNGTV HNSLSYKLHK DLTLQHHPYH SSNPAMRESN GSLHKILSSL RTDPRHSLAL 430 PRGGVEEDGT VITL

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Hematopoietic gene expression profile in zebrafish kidney marrow." Song H.-D., Sun X.-J., Deng M., Zhang G.-W., Zhou Y., Wu X.-Y., Sheng Y., Chen Y., Ruan Z., Jiang C.-L., Fan H.-Y., Zon L.I., Kanki J.P., Liu T.X., Look A.T., Chen Z. Proc. Natl. Acad. Sci. U.S.A. 101:16240-16245(2004) [PubMed: 15520368] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
[2]	Griffiths C. Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[3]	Lovell J. Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[4]	"The genomic sequence of Danio rerio." The Danio rerio Sequencing Project at the Sanger Institute Submitted (JUL-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Tuebingen Ensembl ENSDARP00000052392.
[5]	Ensembl Submitted (JUL-2011) to UniProtKB Cited for: IDENTIFICATION. Strain: Tuebingen Ensembl ENSDARP00000052392.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AY391446 mRNA. Translation: AAQ91258.1. BX855593, BX842688 Genomic DNA. Translation: CAK10942.1. BX842688, BX855593 Genomic DNA. Translation: CAM46967.1.
IPI	IPI00499071.
RefSeq	NP_997728.1. NM_212563.1.
UniGene	Dr.27686.
3D structure databases
HSSP	HSSP built from PDB template 1KEF based on UniProtKB P78352.
ProteinModelPortal	Q6TNS1.
SMR	Q6TNS1. Positions 132-254.
ModBase	Search...
Protein-protein interaction databases
STRING	Q6TNS1.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENSDART00000052393; ENSDARP00000052392; ENSDARG00000036090.
GeneID	80959.
KEGG	dre:80959.
Organism-specific databases
CTD	80959.
ZFIN	ZDB-GENE-010319-35. pard6gb.
Phylogenomic databases
eggNOG	fiNOG11479.
GeneTree	ENSGT00390000005255.
HOGENOM	HBG445487.
HOVERGEN	HBG053509.
InParanoid	Q6TNS1.
OMA	HRIANME.
OrthoDB	EOG4PC9S9.
PhylomeDB	Q6TNS1.
Gene expression databases
ArrayExpress	Q6TNS1.
Bgee	Q6TNS1.
Family and domain databases
InterPro	IPR000270. OPR_PB1. IPR001478. PDZ/DHR/GLGF. [Graphical view]
KO	K06093.
Pfam	PF00564. PB1. 1 hit. PF00595. PDZ. 1 hit. [Graphical view]
SMART	SM00666. PB1. 1 hit. SM00228. PDZ. 1 hit. [Graphical view]
SUPFAM	SSF50156. PDZ. 1 hit.
PROSITE	PS50106. PDZ. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q6TNS1_DANRE

Accession

Primary (citable) accession number: Q6TNS1

Entry history

Integrated into UniProtKB/TrEMBL:	July 5, 2004
Last sequence update:	July 5, 2004
Last modified:	January 25, 2012
This is version 58 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)