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Protein
Submitted name:

Autoantigenic hnRNP-associated with lethal yellow

Gene

raly

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionRNA-bindingPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Autoantigenic hnRNP-associated with lethal yellowImported
Gene namesi
Name:ralyImported
Synonyms:RALYImported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio

Organism-specific databases

ZFINiZDB-GENE-041010-127 raly

Structurei

3D structure databases

ProteinModelPortaliQ6TGV1
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini21 – 92RRMInterPro annotationAdd BLAST72

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili184 – 211Sequence analysisAdd BLAST28

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG0118 Eukaryota
COG0724 LUCA
HOVERGENiHBG002302
KOiK12895
PhylomeDBiQ6TGV1

Family and domain databases

CDDicd12604 RRM_RALY, 1 hit
Gene3Di3.30.70.330, 1 hit
InterProiView protein in InterPro
IPR017347 hnRNP_C
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR034502 RALY_RRM
IPR035979 RBD_domain_sf
IPR000504 RRM_dom
PfamiView protein in Pfam
PF00076 RRM_1, 1 hit
PIRSFiPIRSF037992 hnRNP-C_Raly, 1 hit
SMARTiView protein in SMART
SM00360 RRM, 1 hit
SUPFAMiSSF54928 SSF54928, 1 hit
PROSITEiView protein in PROSITE
PS50102 RRM, 1 hit

Sequencei

Sequence statusi: Complete.

Q6TGV1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSLKVQTSNI TNKNDPKSIN SRVFIGNLNT AVVKKSDVET IFSKYGRVLG
60 70 80 90 100
CSVHKGYAFV QYANERHARG AVIGENGRVL AGQTLDINMA GEPKPNRPKG
110 120 130 140 150
LKRSAATLYS GYDFDYDYYR DDFYDRLFEY RGRVSPVPRA VPVKRPRVAV
160 170 180 190 200
PVVRRVKSLP VKLLTRSAIL PNSSVKHKLK STELQAIKSE LTQIKSNIDA
210 220 230 240 250
LLGRLDQITE DKYCSTELQK AEDLKSEASQ DESGSESQDL QHSDVEEGED
260 270
HTHEECDDDM ENNHISEMDP ILQ
Length:273
Mass (Da):30,689
Last modified:July 5, 2004 - v1
Checksum:i5F8D71BCC6CF626D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY398405 mRNA Translation: AAQ97838.1
RefSeqiNP_991173.1, NM_205610.1
UniGeneiDr.133570

Genome annotation databases

GeneIDi402903
KEGGidre:402903

Similar proteinsi

Entry informationi

Entry nameiQ6TGV1_DANRE
AccessioniPrimary (citable) accession number: Q6TGV1
Entry historyiIntegrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: February 28, 2018
This is version 92 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health