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Protein
Submitted name:

Coronatine-insensitive 1

Gene

Coi1

Organism
Solanum lycopersicum (Tomato) (Lycopersicon esculentum)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Coronatine-insensitive 1Imported
Gene namesi
Name:Coi1Imported
OrganismiSolanum lycopersicum (Tomato) (Lycopersicon esculentum)
Taxonomic identifieri4081 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaeasteridslamiidsSolanalesSolanaceaeSolanoideaeSolaneaeSolanumLycopersicon
Proteomesi
  • UP000004994 Componenti: Chromosome 5

Interactioni

Protein-protein interaction databases

DIPiDIP-39130N.
STRINGi4081.Solyc05g052620.2.1.

Family & Domainsi

Phylogenomic databases

eggNOGiKOG1947. Eukaryota.
ENOG410XQ54. LUCA.
KOiK13463.
OMAiKQILAYY.
OrthoDBiEOG093604QH.

Family and domain databases

Gene3Di3.80.10.10. 3 hits.
InterProiView protein in InterPro
IPR032675. L_dom-like.

Sequencei

Sequence statusi: Complete.

Q6TDU2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEERNSTRLS SSTNDTVWEC VIPYIQESRD RDAVSLVCKR WWQIDAITRK
60 70 80 90 100
HITMALCYTA KPEQLSRRFP HLESVKLKGK PRAAMFNLIP EDWGGYVTPW
110 120 130 140 150
VMEITKSFSK LKALHFRRMI VRDSDLELLA NRRGRVLQVL KLDKCSGFST
160 170 180 190 200
DGLLHISRSC KNLRTLLMEE SYIIEKDGEW AHELALNNTV LENLNFYMTD
210 220 230 240 250
LLQVRAEDLE LIARNCKSLV SMKISECEIT NLLGFFRAAA ALEEFGGGAF
260 270 280 290 300
NDQPELVVEN GYNEHSGKYA ALVFPPRLCQ LGLTYLGRNE MSILFPIASR
310 320 330 340 350
LRKLDLLYAL LDTAAHCFLL QRCPNLEILE TRNVVGDRGL EVLGQYCKRL
360 370 380 390 400
KRLRIERGAD DQEMEDEEGA VTHRGLIDLA KGCLELEYMA VYVSDITNEA
410 420 430 440 450
LEVIGTYLKN LSDFRLVLLD REERITDLPL DNGVRALLRG CHNLRRFALY
460 470 480 490 500
VRPGGLTDVG LSYVGQYSPN VRWMLLGYVG ESDHGLLEFS KGCPSLQKLE
510 520 530 540 550
VRGCCFSERA LALATLQLKS LRYLWVQGYR ASSAGRDLLA MARPFWNIEL
560 570 580 590 600
IPARRVIAND GNNAETVVSE HPAHILAYYS LAGQRTDFPD TVKPLDPTYL

LAE
Length:603
Mass (Da):68,555
Last modified:July 5, 2004 - v1
Checksum:i4073C47F043474EC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY423549 Genomic DNA. Translation: AAR82925.1.
AY423550 mRNA. Translation: AAR82926.1.
RefSeqiNP_001234464.1. NM_001247535.1.
UniGeneiLes.4485.

Genome annotation databases

EnsemblPlantsiSolyc05g052620.2.1; Solyc05g052620.2.1; Solyc05g052620.2.
GeneIDi543911.
GrameneiSolyc05g052620.2.1; Solyc05g052620.2.1; Solyc05g052620.2.
KEGGisly:543911.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY423549 Genomic DNA. Translation: AAR82925.1.
AY423550 mRNA. Translation: AAR82926.1.
RefSeqiNP_001234464.1. NM_001247535.1.
UniGeneiLes.4485.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

DIPiDIP-39130N.
STRINGi4081.Solyc05g052620.2.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiSolyc05g052620.2.1; Solyc05g052620.2.1; Solyc05g052620.2.
GeneIDi543911.
GrameneiSolyc05g052620.2.1; Solyc05g052620.2.1; Solyc05g052620.2.
KEGGisly:543911.

Phylogenomic databases

eggNOGiKOG1947. Eukaryota.
ENOG410XQ54. LUCA.
KOiK13463.
OMAiKQILAYY.
OrthoDBiEOG093604QH.

Family and domain databases

Gene3Di3.80.10.10. 3 hits.
InterProiView protein in InterPro
IPR032675. L_dom-like.
ProtoNetiSearch...

Entry informationi

Entry nameiQ6TDU2_SOLLC
AccessioniPrimary (citable) accession number: Q6TDU2
Entry historyiIntegrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: April 12, 2017
This is version 45 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.