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Q6TDP4

- KLH17_HUMAN

UniProt

Q6TDP4 - KLH17_HUMAN

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Protein
Kelch-like protein 17
Gene
KLHL17
Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 4 out of 5 - Experimental evidence at transcript leveli

Functioni

Substrate-recognition component of some cullin-RING-based BCR (BTB-CUL3-RBX1) E3 ubiquitin-protein ligase complex. The BCR(KLHL17) mediates the ubiquitination and subsequenct degradation of GLUR6. May play a role in the actin-based neuronal function By similarity.

Pathwayi

GO - Molecular functioni

  1. protein complex scaffold Source: UniProtKB
Complete GO annotation...

GO - Biological processi

  1. actin cytoskeleton organization Source: UniProtKB
  2. brain development Source: Ensembl
  3. protein ubiquitination Source: UniProtKB-UniPathway
Complete GO annotation...

Keywords - Biological processi

Ubl conjugation pathway

Keywords - Ligandi

Actin-binding

Enzyme and pathway databases

UniPathwayiUPA00143.

Names & Taxonomyi

Protein namesi
Recommended name:
Kelch-like protein 17
Alternative name(s):
Actinfilin
Gene namesi
Name:KLHL17
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Chromosome 1

Organism-specific databases

HGNCiHGNC:24023. KLHL17.

Subcellular locationi

Cell junctionsynapsepostsynaptic cell membranepostsynaptic density By similarity. Cell junctionsynapse By similarity
Note: Postsynaptic density By similarity.

GO - Cellular componenti

  1. actin cytoskeleton Source: UniProtKB
  2. cell junction Source: UniProtKB-KW
  3. dendrite cytoplasm Source: Ensembl
  4. extracellular space Source: UniProt
  5. neuronal cell body Source: Ensembl
  6. postsynaptic density Source: UniProtKB-SubCell
  7. postsynaptic membrane Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Cell junction, Cell membrane, Membrane, Postsynaptic cell membrane, Synapse

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA134887396.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 642642Kelch-like protein 17
PRO_0000119119Add
BLAST

Proteomic databases

MaxQBiQ6TDP4.
PaxDbiQ6TDP4.
PRIDEiQ6TDP4.

PTM databases

PhosphoSiteiQ6TDP4.

Expressioni

Gene expression databases

ArrayExpressiQ6TDP4.
BgeeiQ6TDP4.
CleanExiHS_KLHL17.
GenevestigatoriQ6TDP4.

Organism-specific databases

HPAiHPA031251.

Interactioni

Subunit structurei

Interacts with F-actin; the interaction disruptes the F-actin structures and leads to marked changes of neuronal morphology. Component of a complex, composed of PDZK1, SYNGAP1, KLHL17 and NMDA receptors. Interacts directly with PDZK1 (via PDZ1 domain); the interaction is important for integrity of actin cytoskeleton structures in neurons. Interacts with DLG4 and SYNGAP1. Interacts (via kelch repeats) with GRIK2 (via C-terminus); the interaction targets GRIK2 for degradation via ubiquitin-proteasome pathway. Interacts with GRIK1. Interacts with (via BTB domain) CUL3; the interaction regulates surface GRIK2 expression By similarity.

Protein-protein interaction databases

BioGridi130885. 1 interaction.
STRINGi9606.ENSP00000343930.

Structurei

3D structure databases

ProteinModelPortaliQ6TDP4.
SMRiQ6TDP4. Positions 74-320, 343-622.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini92 – 15968BTB
Add
BLAST
Domaini194 – 296103BACK
Add
BLAST
Repeati343 – 38947Kelch 1
Add
BLAST
Repeati390 – 43647Kelch 2
Add
BLAST
Repeati438 – 48346Kelch 3
Add
BLAST
Repeati484 – 53047Kelch 4
Add
BLAST
Repeati532 – 57746Kelch 5
Add
BLAST
Repeati578 – 62447Kelch 6
Add
BLAST

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni289 – 641353Interaction with F-actin By similarity
Add
BLAST
Regioni640 – 6423Interaction with PDZK1 By similarity

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi15 – 5238Pro-rich
Add
BLAST

Sequence similaritiesi

Contains 1 BTB (POZ) domain.
Contains 6 Kelch repeats.

Keywords - Domaini

Kelch repeat, Repeat

Phylogenomic databases

eggNOGiNOG236397.
HOGENOMiHOG000230814.
HOVERGENiHBG014286.
InParanoidiQ6TDP4.
KOiK10454.
OMAiMQLLNRD.
OrthoDBiEOG7ZWD17.
PhylomeDBiQ6TDP4.
TreeFamiTF329218.

Family and domain databases

Gene3Di2.130.10.80. 1 hit.
3.30.710.10. 1 hit.
InterProiIPR011705. BACK.
IPR000210. BTB/POZ-like.
IPR011333. BTB/POZ_fold.
IPR013069. BTB_POZ.
IPR011043. Gal_Oxase/kelch_b-propeller.
IPR015916. Gal_Oxidase_b-propeller.
IPR017096. Kelch-like_gigaxonin-typ.
IPR006652. Kelch_1.
[Graphical view]
PfamiPF07707. BACK. 1 hit.
PF00651. BTB. 1 hit.
PF01344. Kelch_1. 5 hits.
[Graphical view]
PIRSFiPIRSF037037. Kelch-like_protein_gigaxonin. 1 hit.
SMARTiSM00875. BACK. 1 hit.
SM00225. BTB. 1 hit.
SM00612. Kelch. 6 hits.
[Graphical view]
SUPFAMiSSF50965. SSF50965. 1 hit.
SSF54695. SSF54695. 1 hit.
PROSITEiPS50097. BTB. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q6TDP4-1 [UniParc]FASTAAdd to Basket

« Hide

MQPRSERPAG RTQSPEHGSP GPGPEAPPPP PPQPPAPEAE RTRPRQARPA    50
APMEGAVQLL SREGHSVAHN SKRHYHDAFV AMSRMRQRGL LCDIVLHVAA 100
KEIRAHKVVL ASCSPYFHAM FTNEMSESRQ THVTLHDIDP QALDQLVQFA 150
YTAEIVVGEG NVQTLLPAAS LLQLNGVRDA CCKFLLSQLD PSNCLGIRGF 200
ADAHSCSDLL KAAHRYVLQH FVDVAKTEEF MLLPLKQVLE LVSSDSLNVP 250
SEEEVYRAVL SWVKHDVDAR RQHVPRLMKC VRLPLLSRDF LLGHVDAESL 300
VRHHPDCKDL LIEALKFHLL PEQRGVLGTS RTRPRRCEGA GPVLFAVGGG 350
SLFAIHGDCE AYDTRTDRWH VVASMSTRRA RVGVAAVGNR LYAVGGYDGT 400
SDLATVESYD PVTNTWQPEV SMGTRRSCLG VAALHGLLYS AGGYDGASCL 450
NSAERYDPLT GTWTSVAAMS TRRRYVRVAT LDGNLYAVGG YDSSSHLATV 500
EKYEPQVNVW SPVASMLSRR SSAGVAVLEG ALYVAGGNDG TSCLNSVERY 550
SPKAGAWESV APMNIRRSTH DLVAMDGWLY AVGGNDGSSS LNSIEKYNPR 600
TNKWVAASCM FTRRSSVGVA VLELLNFPPP SSPTLSVSST SL 642
Length:642
Mass (Da):69,874
Last modified:July 5, 2004 - v1
Checksum:iFE37BBCCD32131BF
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AY423763 mRNA. Translation: AAR03710.1.
AL645608 Genomic DNA. Translation: CAI15569.1.
CCDSiCCDS30550.1.
RefSeqiNP_938073.1. NM_198317.2.
UniGeneiHs.109212.

Genome annotation databases

EnsembliENST00000338591; ENSP00000343930; ENSG00000187961.
GeneIDi339451.
KEGGihsa:339451.
UCSCiuc001aca.2. human.

Polymorphism databases

DMDMi52783052.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AY423763 mRNA. Translation: AAR03710.1 .
AL645608 Genomic DNA. Translation: CAI15569.1 .
CCDSi CCDS30550.1.
RefSeqi NP_938073.1. NM_198317.2.
UniGenei Hs.109212.

3D structure databases

ProteinModelPortali Q6TDP4.
SMRi Q6TDP4. Positions 74-320, 343-622.
ModBasei Search...

Protein-protein interaction databases

BioGridi 130885. 1 interaction.
STRINGi 9606.ENSP00000343930.

PTM databases

PhosphoSitei Q6TDP4.

Polymorphism databases

DMDMi 52783052.

Proteomic databases

MaxQBi Q6TDP4.
PaxDbi Q6TDP4.
PRIDEi Q6TDP4.

Protocols and materials databases

DNASUi 339451.
Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENST00000338591 ; ENSP00000343930 ; ENSG00000187961 .
GeneIDi 339451.
KEGGi hsa:339451.
UCSCi uc001aca.2. human.

Organism-specific databases

CTDi 339451.
GeneCardsi GC01P000885.
HGNCi HGNC:24023. KLHL17.
HPAi HPA031251.
neXtProti NX_Q6TDP4.
PharmGKBi PA134887396.
GenAtlasi Search...

Phylogenomic databases

eggNOGi NOG236397.
HOGENOMi HOG000230814.
HOVERGENi HBG014286.
InParanoidi Q6TDP4.
KOi K10454.
OMAi MQLLNRD.
OrthoDBi EOG7ZWD17.
PhylomeDBi Q6TDP4.
TreeFami TF329218.

Enzyme and pathway databases

UniPathwayi UPA00143 .

Miscellaneous databases

ChiTaRSi KLHL17. human.
GenomeRNAii 339451.
NextBioi 97399.
PROi Q6TDP4.

Gene expression databases

ArrayExpressi Q6TDP4.
Bgeei Q6TDP4.
CleanExi HS_KLHL17.
Genevestigatori Q6TDP4.

Family and domain databases

Gene3Di 2.130.10.80. 1 hit.
3.30.710.10. 1 hit.
InterProi IPR011705. BACK.
IPR000210. BTB/POZ-like.
IPR011333. BTB/POZ_fold.
IPR013069. BTB_POZ.
IPR011043. Gal_Oxase/kelch_b-propeller.
IPR015916. Gal_Oxidase_b-propeller.
IPR017096. Kelch-like_gigaxonin-typ.
IPR006652. Kelch_1.
[Graphical view ]
Pfami PF07707. BACK. 1 hit.
PF00651. BTB. 1 hit.
PF01344. Kelch_1. 5 hits.
[Graphical view ]
PIRSFi PIRSF037037. Kelch-like_protein_gigaxonin. 1 hit.
SMARTi SM00875. BACK. 1 hit.
SM00225. BTB. 1 hit.
SM00612. Kelch. 6 hits.
[Graphical view ]
SUPFAMi SSF50965. SSF50965. 1 hit.
SSF54695. SSF54695. 1 hit.
PROSITEi PS50097. BTB. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Huang C.Q., Wu S.L., Shan Y.X.
    Submitted (SEP-2003) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
  2. "The DNA sequence and biological annotation of human chromosome 1."
    Gregory S.G., Barlow K.F., McLay K.E., Kaul R., Swarbreck D., Dunham A., Scott C.E., Howe K.L., Woodfine K., Spencer C.C.A., Jones M.C., Gillson C., Searle S., Zhou Y., Kokocinski F., McDonald L., Evans R., Phillips K.
    , Atkinson A., Cooper R., Jones C., Hall R.E., Andrews T.D., Lloyd C., Ainscough R., Almeida J.P., Ambrose K.D., Anderson F., Andrew R.W., Ashwell R.I.S., Aubin K., Babbage A.K., Bagguley C.L., Bailey J., Beasley H., Bethel G., Bird C.P., Bray-Allen S., Brown J.Y., Brown A.J., Buckley D., Burton J., Bye J., Carder C., Chapman J.C., Clark S.Y., Clarke G., Clee C., Cobley V., Collier R.E., Corby N., Coville G.J., Davies J., Deadman R., Dunn M., Earthrowl M., Ellington A.G., Errington H., Frankish A., Frankland J., French L., Garner P., Garnett J., Gay L., Ghori M.R.J., Gibson R., Gilby L.M., Gillett W., Glithero R.J., Grafham D.V., Griffiths C., Griffiths-Jones S., Grocock R., Hammond S., Harrison E.S.I., Hart E., Haugen E., Heath P.D., Holmes S., Holt K., Howden P.J., Hunt A.R., Hunt S.E., Hunter G., Isherwood J., James R., Johnson C., Johnson D., Joy A., Kay M., Kershaw J.K., Kibukawa M., Kimberley A.M., King A., Knights A.J., Lad H., Laird G., Lawlor S., Leongamornlert D.A., Lloyd D.M., Loveland J., Lovell J., Lush M.J., Lyne R., Martin S., Mashreghi-Mohammadi M., Matthews L., Matthews N.S.W., McLaren S., Milne S., Mistry S., Moore M.J.F., Nickerson T., O'Dell C.N., Oliver K., Palmeiri A., Palmer S.A., Parker A., Patel D., Pearce A.V., Peck A.I., Pelan S., Phelps K., Phillimore B.J., Plumb R., Rajan J., Raymond C., Rouse G., Saenphimmachak C., Sehra H.K., Sheridan E., Shownkeen R., Sims S., Skuce C.D., Smith M., Steward C., Subramanian S., Sycamore N., Tracey A., Tromans A., Van Helmond Z., Wall M., Wallis J.M., White S., Whitehead S.L., Wilkinson J.E., Willey D.L., Williams H., Wilming L., Wray P.W., Wu Z., Coulson A., Vaudin M., Sulston J.E., Durbin R.M., Hubbard T., Wooster R., Dunham I., Carter N.P., McVean G., Ross M.T., Harrow J., Olson M.V., Beck S., Rogers J., Bentley D.R.
    Nature 441:315-321(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Entry informationi

Entry nameiKLH17_HUMAN
AccessioniPrimary (citable) accession number: Q6TDP4
Secondary accession number(s): Q5SV94
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 27, 2004
Last sequence update: July 5, 2004
Last modified: July 9, 2014
This is version 92 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 1
    Human chromosome 1: entries, gene names and cross-references to MIM
  2. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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