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Unreviewed, UniProtKB/TrEMBL Q6TDH0 (Q6TDH0_MOUSE)

Last modified January 19, 2010. Version 36. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information

Names and origin

Protein namesSubmitted name:
    Interferon gamma EMBL AAR00339.1
Gene names
Name: Ifng MGI 107656
OrganismMus musculus (Mouse) EMBL AAR00339.1
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMus

Protein attributes

Sequence length73 AA.
Sequence statusFragment.
Protein existenceEvidence at transcript level.

Ontologies

Gene Ontology (GO)
   Biological processcell cycle arrest

Inferred from electronic annotation. Source: Compara

immune response

Inferred from electronic annotation. Source: InterPro

negative regulation of smooth muscle cell proliferation

Inferred from electronic annotation. Source: Compara

positive regulation of calcidiol 1-monooxygenase activity

Inferred from electronic annotation. Source: Compara

positive regulation of fructose 1,6-bisphosphate 1-phosphatase activity

Inferred from electronic annotation. Source: Compara

positive regulation of fructose 1,6-bisphosphate metabolic process

Inferred from electronic annotation. Source: Compara

positive regulation of interleukin-12 production

Inferred from electronic annotation. Source: Compara

positive regulation of killing of cells of another organism

Inferred from electronic annotation. Source: Compara

positive regulation of membrane protein ectodomain proteolysis

Inferred from electronic annotation. Source: Compara

positive regulation of nitric oxide biosynthetic process

Inferred from electronic annotation. Source: Compara

positive regulation of peptidyl-serine phosphorylation of STAT protein

Inferred from electronic annotation. Source: Compara

positive regulation of smooth muscle cell apoptosis

Inferred from electronic annotation. Source: Compara

positive regulation of tyrosine phosphorylation of Stat1 protein

Inferred from electronic annotation. Source: Compara

positive regulation of vitamin D biosynthetic process

Inferred from electronic annotation. Source: Compara

protein import into nucleus, translocation

Inferred from electronic annotation. Source: Compara

regulation of insulin secretion

Inferred from electronic annotation. Source: Compara

response to virus

Inferred from electronic annotation. Source: Compara

   Cellular componentextracellular region

Inferred from electronic annotation. Source: InterPro

   Molecular functioninterferon-gamma receptor binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL AAR00339.1
Non-terminal residue731 EMBL AAR00339.1

Sequences

Sequence LengthMass (Da)Tools
Q6TDH0-1 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: 71ED7C73DC9F0CCD

FASTA738,422
        10         20         30         40         50         60 
AVSGCYCHGT VIESLESLNN YFNSSGIDVE EKSLFLDIWR NWQKDGDMKI LQSQIISFYL 

        70 
RLFEVLKDNQ AIS 

« Hide

References

[1]"Immediate early gene expression."
Gerhauser I., Ulrich R., Baumgartner W.
Submitted (SEP-2003) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: SJL/J EMBL AAR00339.1.
Tissue: Spleen EMBL AAR00339.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AY423847 mRNA. Translation: AAR00339.1.
IPIIPI00136892.
UniGeneMm.240327

3D structure databases

SMRQ6TDH0. Positions 8-73.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ6TDH0.

Genome annotation databases

EnsemblENSMUST00000068592; ENSMUSP00000063800; ENSMUSG00000055170; Mus musculus. [Genome view]

Organism-specific databases

MGIMGI:107656. Ifng.

Phylogenomic databases

HOVERGENQ6TDH0.
InParanoidQ6TDH0.

Gene expression databases

ArrayExpressQ6TDH0.
BgeeQ6TDH0.
GenevestigatorQ6TDH0.

Family and domain databases

InterProIPR009079. 4_helix_cytokine-like_core.
IPR002069. Interferon_gamma.
[Graphical view]
PANTHERPTHR11419. IFN-gamma. 1 hit.
PfamPF00714. IFN-gamma. 1 hit.
[Graphical view]
ProDomPD002435. Interferon_gamma. 1 hit.
[Graphical view] [Entries sharing at least one domain]
ProtoNetSearch...

Other Resources

SOURCESearch...

Entry information

Entry nameQ6TDH0_MOUSE
AccessionPrimary (citable) accession number: Q6TDH0
Entry history
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: January 19, 2010
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information