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Protein

Progestin and adipoQ receptor family member 6

Gene

PAQR6

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Receptor

Names & Taxonomyi

Protein namesi
Recommended name:
Progestin and adipoQ receptor family member 6
Alternative name(s):
Progestin and adipoQ receptor family member VI
Gene namesi
Name:PAQR6
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 1

Organism-specific databases

HGNCiHGNC:30132. PAQR6.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Topological domaini1 – 51CytoplasmicSequence analysisAdd BLAST51
Transmembranei52 – 72HelicalSequence analysisAdd BLAST21
Topological domaini73 – 83ExtracellularSequence analysisAdd BLAST11
Transmembranei84 – 104HelicalSequence analysisAdd BLAST21
Topological domaini105 – 113CytoplasmicSequence analysis9
Transmembranei114 – 134HelicalSequence analysisAdd BLAST21
Topological domaini135 – 147ExtracellularSequence analysisAdd BLAST13
Transmembranei148 – 168HelicalSequence analysisAdd BLAST21
Topological domaini169 – 217CytoplasmicSequence analysisAdd BLAST49
Transmembranei218 – 238HelicalSequence analysisAdd BLAST21
Topological domaini239 – 258ExtracellularSequence analysisAdd BLAST20
Transmembranei259 – 279HelicalSequence analysisAdd BLAST21
Topological domaini280 – 292CytoplasmicSequence analysisAdd BLAST13
Transmembranei293 – 313HelicalSequence analysisAdd BLAST21
Topological domaini314 – 344ExtracellularSequence analysisAdd BLAST31

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000160781.
PharmGKBiPA134931897.

Polymorphism and mutation databases

DMDMi51701773.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002188501 – 344Progestin and adipoQ receptor family member 6Add BLAST344

Proteomic databases

PaxDbiQ6TCH4.
PRIDEiQ6TCH4.

PTM databases

iPTMnetiQ6TCH4.
PhosphoSitePlusiQ6TCH4.

Expressioni

Tissue specificityi

Expressed at a low level in brain.1 Publication

Gene expression databases

BgeeiENSG00000160781.
CleanExiHS_PAQR6.
ExpressionAtlasiQ6TCH4. baseline and differential.
GenevisibleiQ6TCH4. HS.

Organism-specific databases

HPAiHPA010843.

Interactioni

Protein-protein interaction databases

BioGridi123026. 1 interactor.
STRINGi9606.ENSP00000338330.

Structurei

3D structure databases

ProteinModelPortaliQ6TCH4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ADIPOR family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiKOG0748. Eukaryota.
COG1272. LUCA.
GeneTreeiENSGT00530000062965.
HOVERGENiHBG052505.
InParanoidiQ6TCH4.
OMAiFDIHQVP.
PhylomeDBiQ6TCH4.
TreeFamiTF319738.

Family and domain databases

InterProiIPR004254. AdipoR/HlyIII-related.
[Graphical view]
PANTHERiPTHR20855. PTHR20855. 1 hit.
PfamiPF03006. HlyIII. 1 hit.
[Graphical view]

Sequences (5)i

Sequence statusi: Complete.

This entry describes 5 isoformsi produced by alternative splicing. AlignAdd to basket

Isoform 1 (identifier: Q6TCH4-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide

        10         20         30         40         50
MLSLKLPQLL QVHQVPRVFW EDGIMSGYRR PTSSALDCVL SSFQMTNETV
60 70 80 90 100
NIWTHFLPTW YFLWRLLALA GGPGFRAEPY HWPLLVFLLP ACLYPFASCC
110 120 130 140 150
AHTFSSMSPR MRHICYFLDY GALSLYSLGC AFPYAAYSMP ASWLHGHLHQ
160 170 180 190 200
FFVPAAALNS FLCTGLSCYS RFLELESPGL SKVLRTGAFA YPFLFDNLPL
210 220 230 240 250
FYRLGLCWGR GHGCGQEALS TSHGYHLFCA LLTGFLFASH LPERLAPGRF
260 270 280 290 300
DYIGHSHQLF HICAVLGTHF QLEAVLADMG SRRAWLATQE PALGLAGTVA
310 320 330 340
TLVLAAAGNL LIIAAFTATL LRAPSTCPLL QGGPLEGGTQ AKQQ
Length:344
Mass (Da):37,989
Last modified:August 31, 2004 - v2
Checksum:iBCFDD8A2210A6989
GO
Isoform 2 (identifier: Q6TCH4-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     1-106: Missing.
     255-344: HSHQLFHICA...LEGGTQAKQQ → EGTPGPAREE...LRGEMHACPG

Show »
Length:351
Mass (Da):39,060
Checksum:i6C07E83A749F0DC9
GO
Isoform 3 (identifier: Q6TCH4-3) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     1-106: Missing.

Show »
Length:238
Mass (Da):25,814
Checksum:iD644B667D86E25BA
GO
Isoform 4 (identifier: Q6TCH4-4) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     1-24: Missing.

Show »
Length:320
Mass (Da):35,160
Checksum:iBF224F981D8A6BA1
GO
Isoform 5 (identifier: Q6TCH4-5) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     15-17: Missing.

Note: No experimental confirmation available.
Show »
Length:341
Mass (Da):37,637
Checksum:iC63AB1F9F872044B
GO

Sequence cautioni

The sequence AAP97701 differs from that shown. Reason: Frameshift at position 338.Curated
The sequence AAP97703 differs from that shown. Reason: Frameshift at position 241.Curated
The sequence BAB15446 differs from that shown. Reason: Erroneous initiation.Curated

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti166L → P in AAR08372 (PubMed:16044242).Curated1
Sequence conflicti224G → V in CAD38905 (PubMed:17974005).Curated1
Sequence conflicti240 – 242HLP → QTD in AAP97703 (Ref. 1) Curated3
Sequence conflicti244R → G in BAC04493 (PubMed:14702039).Curated1

Natural variant

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Isoform 2 (identifier: Q6TCH4-2)
Natural varianti263E → K.Corresponds to variant rs7513351dbSNPEnsembl.1

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Alternative sequenceiVSP_0114841 – 106Missing in isoform 2 and isoform 3. 2 PublicationsAdd BLAST106
Alternative sequenceiVSP_0114831 – 24Missing in isoform 4. 1 PublicationAdd BLAST24
Alternative sequenceiVSP_05453815 – 17Missing in isoform 5. 1 Publication3
Alternative sequenceiVSP_011485255 – 344HSHQL…QAKQQ → EGTPGPAREEAGADAFPEHR MNWATATSYSTSVQCWAPTS SWRQCWLIWDHAEPGWPHRN LPWAWQAQWPHWSWLQLGTY SLLLLSQPPCFGPPVHALCC RVAHWRGVPRPNNSEAPSLT LSWRGQRPGPSADEEPRFGP NQVGTHLSLEPTGAEERGHR REGREEEGCLGGLAECERDR EGALDGSGRSAEGLRGEMHA CPG in isoform 2. 1 PublicationAdd BLAST90

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF455045 mRNA. Translation: AAP97701.1. Frameshift.
AF455047 mRNA. Translation: AAP97703.1. Frameshift.
AY424284 mRNA. Translation: AAR08372.1.
AK026325 mRNA. Translation: BAB15446.1. Different initiation.
AK095143 mRNA. Translation: BAC04493.1.
AK095197 mRNA. Translation: BAC04497.1.
AK316034 mRNA. Translation: BAH14405.1.
AL834227 Transcribed RNA. Translation: CAD38905.2.
AL135927 Genomic DNA. Translation: CAI15542.1.
CH471121 Genomic DNA. Translation: EAW52976.1.
CH471121 Genomic DNA. Translation: EAW52977.1.
CH471121 Genomic DNA. Translation: EAW52979.1.
CH471121 Genomic DNA. Translation: EAW52982.1.
CH471121 Genomic DNA. Translation: EAW52983.1.
BC058509 mRNA. Translation: AAH58509.1.
CCDSiCCDS1135.1. [Q6TCH4-2]
CCDS1136.1. [Q6TCH4-1]
CCDS60301.1. [Q6TCH4-5]
RefSeqiNP_001259033.1. NM_001272104.1. [Q6TCH4-1]
NP_001259034.1. NM_001272105.1. [Q6TCH4-5]
NP_001259036.1. NM_001272107.1. [Q6TCH4-3]
NP_001259037.1. NM_001272108.1.
NP_001259038.1. NM_001272109.1.
NP_001259039.1. NM_001272110.1.
NP_001259040.1. NM_001272111.1.
NP_001259041.1. NM_001272112.1.
NP_001259042.1. NM_001272113.1.
NP_079173.2. NM_024897.3. [Q6TCH4-2]
NP_940798.1. NM_198406.2. [Q6TCH4-1]
UniGeneiHs.235873.

Genome annotation databases

EnsembliENST00000292291; ENSP00000292291; ENSG00000160781. [Q6TCH4-1]
ENST00000335852; ENSP00000338330; ENSG00000160781. [Q6TCH4-2]
ENST00000356983; ENSP00000349474; ENSG00000160781. [Q6TCH4-5]
ENST00000368270; ENSP00000357253; ENSG00000160781. [Q6TCH4-4]
GeneIDi79957.
KEGGihsa:79957.
UCSCiuc001fnu.3. human. [Q6TCH4-1]

Keywords - Coding sequence diversityi

Alternative splicing, Polymorphism

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF455045 mRNA. Translation: AAP97701.1. Frameshift.
AF455047 mRNA. Translation: AAP97703.1. Frameshift.
AY424284 mRNA. Translation: AAR08372.1.
AK026325 mRNA. Translation: BAB15446.1. Different initiation.
AK095143 mRNA. Translation: BAC04493.1.
AK095197 mRNA. Translation: BAC04497.1.
AK316034 mRNA. Translation: BAH14405.1.
AL834227 Transcribed RNA. Translation: CAD38905.2.
AL135927 Genomic DNA. Translation: CAI15542.1.
CH471121 Genomic DNA. Translation: EAW52976.1.
CH471121 Genomic DNA. Translation: EAW52977.1.
CH471121 Genomic DNA. Translation: EAW52979.1.
CH471121 Genomic DNA. Translation: EAW52982.1.
CH471121 Genomic DNA. Translation: EAW52983.1.
BC058509 mRNA. Translation: AAH58509.1.
CCDSiCCDS1135.1. [Q6TCH4-2]
CCDS1136.1. [Q6TCH4-1]
CCDS60301.1. [Q6TCH4-5]
RefSeqiNP_001259033.1. NM_001272104.1. [Q6TCH4-1]
NP_001259034.1. NM_001272105.1. [Q6TCH4-5]
NP_001259036.1. NM_001272107.1. [Q6TCH4-3]
NP_001259037.1. NM_001272108.1.
NP_001259038.1. NM_001272109.1.
NP_001259039.1. NM_001272110.1.
NP_001259040.1. NM_001272111.1.
NP_001259041.1. NM_001272112.1.
NP_001259042.1. NM_001272113.1.
NP_079173.2. NM_024897.3. [Q6TCH4-2]
NP_940798.1. NM_198406.2. [Q6TCH4-1]
UniGeneiHs.235873.

3D structure databases

ProteinModelPortaliQ6TCH4.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi123026. 1 interactor.
STRINGi9606.ENSP00000338330.

PTM databases

iPTMnetiQ6TCH4.
PhosphoSitePlusiQ6TCH4.

Polymorphism and mutation databases

DMDMi51701773.

Proteomic databases

PaxDbiQ6TCH4.
PRIDEiQ6TCH4.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000292291; ENSP00000292291; ENSG00000160781. [Q6TCH4-1]
ENST00000335852; ENSP00000338330; ENSG00000160781. [Q6TCH4-2]
ENST00000356983; ENSP00000349474; ENSG00000160781. [Q6TCH4-5]
ENST00000368270; ENSP00000357253; ENSG00000160781. [Q6TCH4-4]
GeneIDi79957.
KEGGihsa:79957.
UCSCiuc001fnu.3. human. [Q6TCH4-1]

Organism-specific databases

CTDi79957.
GeneCardsiPAQR6.
HGNCiHGNC:30132. PAQR6.
HPAiHPA010843.
MIMi614579. gene.
neXtProtiNX_Q6TCH4.
OpenTargetsiENSG00000160781.
PharmGKBiPA134931897.
GenAtlasiSearch...

Phylogenomic databases

eggNOGiKOG0748. Eukaryota.
COG1272. LUCA.
GeneTreeiENSGT00530000062965.
HOVERGENiHBG052505.
InParanoidiQ6TCH4.
OMAiFDIHQVP.
PhylomeDBiQ6TCH4.
TreeFamiTF319738.

Miscellaneous databases

ChiTaRSiPAQR6. human.
GenomeRNAii79957.
PROiQ6TCH4.
SOURCEiSearch...

Gene expression databases

BgeeiENSG00000160781.
CleanExiHS_PAQR6.
ExpressionAtlasiQ6TCH4. baseline and differential.
GenevisibleiQ6TCH4. HS.

Family and domain databases

InterProiIPR004254. AdipoR/HlyIII-related.
[Graphical view]
PANTHERiPTHR20855. PTHR20855. 1 hit.
PfamiPF03006. HlyIII. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiPAQR6_HUMAN
AccessioniPrimary (citable) accession number: Q6TCH4
Secondary accession number(s): B7Z9R9
, D3DVB4, D3DVB6, Q5TCK9, Q6PDU0, Q7Z4Q7, Q7Z4Q9, Q8N121, Q8N3M2, Q9H621
Entry historyi
Integrated into UniProtKB/Swiss-Prot: August 31, 2004
Last sequence update: August 31, 2004
Last modified: November 2, 2016
This is version 111 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 1
    Human chromosome 1: entries, gene names and cross-references to MIM
  2. MIM cross-references
    Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.