Q6T1G9 (Q6T1G9_LEPPA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
RAG1 EMBL AAS75808.1

Gene names

Name:

Rag1 EMBL AAS75808.1

Organism

Lepidosiren paradoxus (South American lungfish) EMBL AAS75808.1

Taxonomic identifier

7883 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Dipnoi › Lepidosireniformes › Lepidosirenidae › Lepidosiren

Protein attributes

Sequence length	826 AA.
Sequence status	Fragment.
Protein existence	Predicted

Ontologies

Keywords
Domain	Zinc-finger RuleBase RU000353
Ligand	Metal-binding Zinc
Gene Ontology (GO)
Biological process	V(D)J recombination Inferred from electronic annotation. Source: InterPro
Cellular component	intracellular Inferred from electronic annotation. Source: InterPro
Molecular function	acid-amino acid ligase activity Inferred from electronic annotation. Source: InterPro hydrolase activity, acting on ester bonds Inferred from electronic annotation. Source: InterPro sequence-specific DNA binding Inferred from electronic annotation. Source: InterPro zinc ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	1	1	EMBL AAS75808.1
	Non-terminal residue	826	1	EMBL AAS75808.1

Sequences

	Sequence		Length	Mass (Da)
	Q6T1G9 [UniParc]. Last modified July 5, 2004. Version 1. Checksum: AF625B067EDF0C2C	FASTA	826	94,339
	10 20 30 40 50 60 DVQDLLKKMG KKITLWQAII YKVFHTDVTT DLETIHPRHF CHNCRVIINK KIISVSGKEL 70 80 90 100 110 120 YFPKTMKVDW QPHSKVCRVC QPHKQSLKRK SPQHHLQIVK KFKVTNEHAK NMRSKNAKSK 130 140 150 160 170 180 NNIRDGANVM KNITNCRHLH LSTKQLAFEY PADFVKSVSC QVCEHLLADP VQTTCKHLFC 190 200 210 220 230 240 RTCILRCFKA FGHYCPSCKY PSFPTDLMTP IKPFLTILNS IIVNCPLEDC EEQVRLDEYS 250 260 270 280 290 300 HHALIHEESK GKDAYLQINK GGRPRQHLLS LTRRAQKHRL RQLKLQVKAF ADKEEGGDVK 310 320 330 340 350 360 SVCLTLFLLA LRARNEHRQA DELEALMQGR GSGLHPAVCL AIRVNTFLSC SQYHKMYRTV 370 380 390 400 410 420 KAATGRQIFQ PLHALRNAEK ALLPGYHSFE WQPPLVGVST NTDVGIINGL SGLTSSVDEY 430 440 450 460 470 480 PVEALAKRFR YDAALVSTLK DIEEDILEGM KQHGLDEYMS GPFTVVVKES CDGMGDVSEK 490 500 510 520 530 540 HGSGPAVPEK AVRFSFTIMS VSVAMSDSEN VQIFEEIKPN SELSCKPLCL MIADESDHET 550 560 570 580 590 600 LSVILGPVIA ERESMKTSEL ILELGGILRT FKFQFRGTGY DEKLVREVEG MEASGSLYIC 610 620 630 640 650 660 TLCDATRFEA SKNLVLHSIT RSHAENLQRY EVWRSNPYNE SADELRDRVK GVSAKPFIET 670 680 690 700 710 720 RPCIDALHCD IGNATEFYKI FQDEVGEVYK NPNPSREERK RWQMTLDKHL RKKMSLKPVM 730 740 750 760 770 780 RMNGNFARKL ITKEAVDAVC ELIPSEERRV ALRELVDLYM LMKPVWRSTC PGKECPELLC 790 800 810 820 QYSFNSQRFA ELLSTKFQYR YEGKITNYLH KTLAHVPEVI ERDGSI

References

[1]	"Nuclear protein-coding genes support lungfish and not the coelacanth as the closest living relatives of land vertebrates." Brinkmann H., Venkatesh B., Brenner S., Meyer A. Proc. Natl. Acad. Sci. U.S.A. 101:4900-4905(2004) [PubMed: 15037746] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AY442926 Genomic DNA. Translation: AAS75808.1.
3D structure databases
ProteinModelPortal	Q6T1G9.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Phylogenomic databases
HOVERGEN	HBG003861.
Family and domain databases
InterPro	IPR024627. RAG1. IPR023336. RAG_nonamer-bd_dom. IPR015880. Znf_C2H2-like. IPR013087. Znf_C2H2/integrase_DNA-bd. IPR018957. Znf_C3HC4_RING-type. IPR001841. Znf_RING. IPR013083. Znf_RING/FYVE/PHD. IPR017907. Znf_RING_CS. IPR019485. Znf_VDJ_recomb-activ_1. [Graphical view]
Gene3D	G3DSA:3.30.160.60. Znf_C2H2/integrase_DNA-bd. 1 hit. G3DSA:3.30.40.10. Znf_RING/FYVE/PHD. 1 hit.
PANTHER	PTHR11539. PTHR11539. 1 hit.
Pfam	PF12940. RAG1. 1 hit. PF00097. zf-C3HC4. 1 hit. PF10426. zf-RAG1. 1 hit. [Graphical view]
SMART	SM00184. RING. 1 hit. SM00355. ZnF_C2H2. 2 hits. [Graphical view]
PROSITE	PS51487. NBD. 1 hit. PS00518. ZF_RING_1. 1 hit. PS50089. ZF_RING_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q6T1G9_LEPPA

Accession

Primary (citable) accession number: Q6T1G9

Entry history

Integrated into UniProtKB/TrEMBL:	July 5, 2004
Last sequence update:	July 5, 2004
Last modified:	December 14, 2011
This is version 42 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)