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Protein

Packaging protein UL32 homolog

Gene

UL52

Organism
Human cytomegalovirus (strain Merlin) (HHV-5) (Human herpesvirus 5)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Plays a role in efficient localization of neo-synthesized capsids to nuclear replication compartments, thereby controlling cleavage and packaging of virus genomic DNA.By similarity

Names & Taxonomyi

Protein namesi
Recommended name:
Packaging protein UL32 homolog
Gene namesi
Name:UL52
OrganismiHuman cytomegalovirus (strain Merlin) (HHV-5) (Human herpesvirus 5)
Taxonomic identifieri295027 [NCBI]
Taxonomic lineageiVirusesdsDNA viruses, no RNA stageHerpesviralesHerpesviridaeBetaherpesvirinaeCytomegalovirus
Virus hostiHomo sapiens (Human) [TaxID: 9606]
Proteomesi
  • UP000000938 Componenti: Genome

Subcellular locationi

GO - Cellular componenti

Keywords - Cellular componenti

Host cytoplasm, Host nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00004182871 – 668Packaging protein UL32 homologAdd BLAST668

Proteomic databases

PRIDEiQ6SW79

Family & Domainsi

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Compositional biasi84 – 91Poly-Ala8
Compositional biasi402 – 408Poly-Glu7

Sequence similaritiesi

Belongs to the herpesviridae UL32 protein family.Curated

Phylogenomic databases

OrthoDBiVOG0900008B

Family and domain databases

InterProiView protein in InterPro
IPR002597 Herpes_env
PfamiView protein in Pfam
PF01673 Herpes_env, 1 hit

Sequencei

Sequence statusi: Complete.

Q6SW79-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNPSTHVSSN GPTTPPHGPH TTFLPPTSPA PSTSSVAAAT LCSPQRQAVS
60 70 80 90 100
RYSGWSTEYT QWHSDLTTEL LWHAHPRQVP MDEALAAAAA ASYQVNPQHP
110 120 130 140 150
ANRYRHYEFQ TLSLGTSEVD ELLNCCAEET TCGGTQSTVL TNATNTTSCG
160 170 180 190 200
GAVAGSSNAG PAGASAACDL DAELAGLETS AADFEQLRRL CAPLAIDTRC
210 220 230 240 250
NLCAIISICL KQDCDQSWLL EYSLLCFKCS YAPRAALSTL IIMSEFTHLL
260 270 280 290 300
QQHFSDLRID DLFRHHVLTV FDFHLHFFIN RCFEKQVGDA VDNENVTLNH
310 320 330 340 350
LAVVRAMVMG EDTVPYNKPR RHPQQKQKNN PYHVEVPQEL IDNFLEHSSP
360 370 380 390 400
SRDRFVQLLF YMWAGTGVMS TTPLTELTHT KFARLDALST ASEREDARMM
410 420 430 440 450
MEEEEDEEGG EKGGDDPGRH NGGGTSGGFS ESTLKKNVGP IYLCPVPAFF
460 470 480 490 500
TKNQTSTVCL LCELMACSYY DNVVLRELYR RVVSYCQNNV KMVDRIQLVL
510 520 530 540 550
ADLLRECTSP LGAAHEDVAR CGLEAPTSPG GDSDYHGLSG VDGALARPDP
560 570 580 590 600
VFCHVLRQAG VTGIYKHFFC DPQCAGNIRV TNEAVLFGHL HPHHVQEVKL
610 620 630 640 650
AICHDNYYIS RLPRRVWLCI TLFKAFQITK RTYKGKVHLA DFMRDFTQLL
660
ENCDIKLVDP TYVIDKYV
Length:668
Mass (Da):74,119
Last modified:July 5, 2004 - v1
Checksum:iFB12353FE11C0E31
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY446894 Genomic DNA Translation: AAR31618.1
RefSeqiYP_081511.1, NC_006273.2

Genome annotation databases

GeneIDi3077432
KEGGivg:3077432

Similar proteinsi

Entry informationi

Entry nameiUL52_HCMVM
AccessioniPrimary (citable) accession number: Q6SW79
Secondary accession number(s): D2K3M0
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 11, 2012
Last sequence update: July 5, 2004
Last modified: May 23, 2018
This is version 43 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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