Q6S5H4 (POTEB_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 1, 2013.
Version 80.
History...
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: POTE ankyrin domain family member B Alternative name(s): ANKRD26-like family B member 1 Prostate, ovary, testis-expressed protein on chromosome 15 Short name=POTE-15 | ||||
| Gene names |
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| Organism | Homo sapiens (Human) [Reference proteome] | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 581 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at transcript level |
General annotation (Comments)
| Sequence similarities | Belongs to the POTE family. Contains 7 ANK repeats. |
Ontologies
| Keywords | |
|---|---|
| Coding sequence diversity | Alternative splicing Polymorphism |
| Domain | ANK repeat Coiled coil Repeat |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| None. [Check GOA] | |
Alternative products
| This entry describes 3 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: Q6S5H4-1) Also known as: POTE15A; This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: Q6S5H4-2) Also known as: POTE15B; The sequence of this isoform differs from the canonical sequence as follows: 52-88: Missing. | ||||||
| Isoform 3 (identifier: Q6S5H4-3) The sequence of this isoform differs from the canonical sequence as follows: 376-381: EQDLKL → GKEAEE 382-581: Missing. | ||||||
| Note: No experimental confirmation available. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 581 | 581 | POTE ankyrin domain family member B | PRO_0000066917 | |||||
Regions | |||||||||
| Repeat | 138 – 171 | 34 | ANK 1 | ||||||
| Repeat | 172 – 201 | 30 | ANK 2 | ||||||
| Repeat | 205 – 234 | 30 | ANK 3 | ||||||
| Repeat | 238 – 267 | 30 | ANK 4 | ||||||
| Repeat | 271 – 300 | 30 | ANK 5 | ||||||
| Repeat | 304 – 333 | 30 | ANK 6 | ||||||
| Repeat | 337 – 373 | 37 | ANK 7 | ||||||
| Coiled coil | 489 – 577 | 89 | Potential | ||||||
Natural variations | |||||||||
| Alternative sequence | 52 – 88 | 37 | Missing in isoform 2. | VSP_011977 | |||||
| Alternative sequence | 376 – 381 | 6 | EQDLKL → GKEAEE in isoform 3. | VSP_011978 | |||||
| Alternative sequence | 382 – 581 | 200 | Missing in isoform 3. | VSP_011979 | |||||
| Natural variant | 30 | 1 | H → D. Ref.1 Corresponds to variant rs4503752 [ dbSNP | Ensembl ]. | VAR_019914 | |||||
| Natural variant | 43 | 1 | M → V. Ref.1 Corresponds to variant rs2605913 [ dbSNP | Ensembl ]. | VAR_019915 | |||||
| Natural variant | 64 | 1 | C → W. Corresponds to variant rs2458860 [ dbSNP | Ensembl ]. | VAR_019916 | |||||
| Natural variant | 68 | 1 | C → R. Corresponds to variant rs6599743 [ dbSNP | Ensembl ]. | VAR_019917 | |||||
| Natural variant | 77 | 1 | T → K. Corresponds to variant rs4429251 [ dbSNP | Ensembl ]. | VAR_019918 | |||||
| Natural variant | 88 | 1 | N → D. Corresponds to variant rs2458862 [ dbSNP | Ensembl ]. | VAR_019919 | |||||
| Natural variant | 242 | 1 | A → T. Corresponds to variant rs4366679 [ dbSNP | Ensembl ]. | VAR_048277 | |||||
| Natural variant | 286 | 1 | Q → E. Ref.3 Corresponds to variant rs2445603 [ dbSNP | Ensembl ]. | VAR_019920 | |||||
| Natural variant | 511 | 1 | K → E. Corresponds to variant rs1949282 [ dbSNP | Ensembl ]. | VAR_019921 | |||||
| Natural variant | 524 | 1 | R → H. Corresponds to variant rs12148366 [ dbSNP | Ensembl ]. | VAR_061016 | |||||
| Natural variant | 535 | 1 | M → K. Corresponds to variant rs1828869 [ dbSNP | Ensembl ]. | VAR_019922 | |||||
| Natural variant | 568 | 1 | A → T. Corresponds to variant rs1828868 [ dbSNP | Ensembl ]. | VAR_059119 | |||||
| Natural variant | 568 | 1 | A → V. Corresponds to variant rs1828868 [ dbSNP | Ensembl ]. | VAR_019923 | |||||
Experimental info | |||||||||
| Sequence conflict | 203 | 1 | D → G in AAH66981. Ref.3 | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Five POTE paralogs and their splice variants are expressed in human prostate and encode proteins of different lengths." Bera T.K., Huynh N., Maeda H., Sathyanarayana B.K., Lee B., Pastan I. Gene 337:45-53(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS 1 AND 2), VARIANTS ASP-30 AND VAL-43. Tissue: Prostate. |
| [2] | "Analysis of the DNA sequence and duplication history of human chromosome 15." Zody M.C., Garber M., Sharpe T., Young S.K., Rowen L., O'Neill K., Whittaker C.A., Kamal M., Chang J.L., Cuomo C.A., Dewar K., FitzGerald M.G., Kodira C.D., Madan A., Qin S., Yang X., Abbasi N., Abouelleil A. Nusbaum C.Nature 440:671-675(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [3] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 3), VARIANT GLU-286. Tissue: Testis. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AY465170 mRNA. Translation: AAS58869.1. AY465173 mRNA. Translation: AAS58872.1. AC060814 Genomic DNA. No translation available. AC183089 Genomic DNA. No translation available. BC066981 mRNA. Translation: AAH66981.1. |
| IPI | IPI00479028. IPI00479475. IPI00784226. |
| RefSeq | NP_997238.2. NM_207355.2. |
| UniGene | Hs.722659. Hs.742365. |
3D structure databases | |
| ProteinModelPortal | Q6S5H4. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | 9606.ENSP00000413654. |
PTM databases | |
| PhosphoSite | Q6S5H4. |
Polymorphism databases | |
| DMDM | 55976443. |
Proteomic databases | |
| PaxDb | Q6S5H4. |
| PRIDE | Q6S5H4. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| GeneID | 339010. |
| KEGG | hsa:339010. |
| UCSC | uc010tzg.1. human. |
Organism-specific databases | |
| CTD | 339010. |
| GeneCards | GC15M022051. |
| H-InvDB | HIX0172648. HIX0172649. |
| HGNC | HGNC:33734. POTEB. |
| HPA | HPA042822. |
| MIM | 608912. gene. |
| neXtProt | NX_Q6S5H4. |
| PharmGKB | PA164724702. |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | COG0666. |
| HOGENOM | HOG000293138. |
| InParanoid | Q6S5H4. |
| PhylomeDB | Q6S5H4. |
Gene expression databases | |
| CleanEx | HS_POTEB. |
| Genevestigator | Q6S5H4. |
| GermOnline | ENSG00000183206. Homo sapiens. |
Family and domain databases | |
| Gene3D | 1.25.40.20. 1 hit. |
| InterPro | IPR002110. Ankyrin_rpt. IPR020683. Ankyrin_rpt-contain_dom. [Graphical view] |
| Pfam | PF12796. Ank_2. 2 hits. [Graphical view] |
| PRINTS | PR01415. ANKYRIN. |
| SMART | SM00248. ANK. 6 hits. [Graphical view] |
| SUPFAM | SSF48403. ANK. 1 hit. |
| PROSITE | PS50297. ANK_REP_REGION. 1 hit. PS50088. ANK_REPEAT. 5 hits. [Graphical view] |
| ProtoNet | Search... |
Other | |
| GenomeRNAi | 339010. |
| NextBio | 97219. |
| SOURCE | Search... |
Entry information
| Entry name | POTEB_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q6S5H4 Secondary accession number(s): Q6NXN7, Q6S5H7 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 15 Human chromosome 15: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with
