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Q6S3H8 (Q6S3H8_TORMA) Unreviewed, UniProtKB/TrEMBL

Last modified March 6, 2013. Version 58. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Acetylcholine receptor delta subunit EMBL AAR29363.1
OrganismTorpedo marmorata (Marbled electric ray) EMBL AAR29363.1
Taxonomic identifier7788 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Chondrichthyes › Elasmobranchii › Batoidea › Torpediniformes › Torpedinidae › Torpedo

Protein attributes

Sequence length522 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Sequence similarities

Belongs to the ligand-gated ion channel (TC 1.A.9) family. [View classification] RuleBase RU000687

Sequences

Sequence LengthMass (Da)Tools
Q6S3H8 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: 6CE58EB60719E31D

FASTA52259,959
        10         20         30         40         50         60 
MGNIHFVYLL ISCLYYSGCS GVNEEERLIN DLLIVNKYNK HVRPVKHNNE VVNIALSLTL 

        70         80         90        100        110        120 
SNLISLKETD ETLTTNVWMD HAWYDHRLTW NASEYSDISI LRLRPELIWI PDIVLQNNND 

       130        140        150        160        170        180 
GQYNVAYFCN VLVRPNGYVT WLPPAIFRSS CPINVLYFPF DWQNCSLKFT ALNYNANEIS 

       190        200        210        220        230        240 
MDLMTDTIDG KDYPIEWIII DPEAFTENGE WEIIHKPAKK NIYGDKFPNG TNYQDVTFYL 

       250        260        270        280        290        300 
IIRRKPLFYV INFITPCVLI SFLAALAFYL PAESGEKMST AICVLLAQAV FLLLTSQRLP 

       310        320        330        340        350        360 
ETALAVPLIG KYLMFIMSLV TGVVVNCGIV LNFHFRTPST HVLSTRVKQI FLEKLPRILH 

       370        380        390        400        410        420 
MSRVDEIEQP DWQNDLKLRR SSSVGYISKA QEYFNIKSRS ELMFEKQSER HGLVPRVTPR 

       430        440        450        460        470        480 
IGFGNNNENI AASDQLHDEI KSGIDSTNYI VKQIKEKNAY DEEVGNWNLV GQTIDRLSMF 

       490        500        510        520 
IITPVMVLGT IFIFVMGNFN RPPAKPFEGD PFDYSSDHPR CA

« Hide

References

[1]"Phylogenetic conservation of disulfide-linked, dimeric acetylcholine receptor pentamers in southern ocean electric rays."
Tierney M.L., Osborn K.E., Milburn P.J., Stowell M.H., Howitt S.M.
J. Exp. Biol. 207:3581-3590(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[2]"Refined structure of the nicotinic acetylcholine receptor at 4A resolution."
Unwin N.
J. Mol. Biol. 346:967-989(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: STRUCTURE BY ELECTRON MICROSCOPY (4.00 ANGSTROMS) OF 22-505.
[3]"Gating movement of acetylcholine receptor caught by plunge-freezing."
Unwin N., Fujiyoshi Y.
J. Mol. Biol. 422:617-634(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: STRUCTURE BY ELECTRON MICROSCOPY (6.20 ANGSTROMS).
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AY472105 mRNA. Translation: AAR29363.1.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
2BG9electron microscopy4.00C22-505[»]
4AQ5electron microscopy6.20C1-522[»]
4AQ9electron microscopy6.20C1-522[»]
ProteinModelPortalQ6S3H8.
SMRQ6S3H8. Positions 22-505.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Phylogenomic databases

HOVERGENHBG003756.

Family and domain databases

Gene3D2.70.170.10. 1 hit.
InterProIPR006202. Neur_chan_lig-bd.
IPR006201. Neur_channel.
IPR006029. Neurotrans-gated_channel_TM.
IPR018000. Neurotransmitter_ion_chnl_CS.
IPR002394. Nicotinic_acetylcholine_rcpt.
[Graphical view]
PANTHERPTHR18945. PTHR18945. 1 hit.
PfamPF02931. Neur_chan_LBD. 1 hit.
PF02932. Neur_chan_memb. 1 hit.
[Graphical view]
PRINTSPR00254. NICOTINICR.
PR00252. NRIONCHANNEL.
SUPFAMSSF90112. Neu_channel_TM. 1 hit.
SSF63712. Neur_chan_LBD. 1 hit.
TIGRFAMsTIGR00860. LIC. 1 hit.
PROSITEPS00236. NEUROTR_ION_CHANNEL. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

EvolutionaryTraceQ6S3H8.

Entry information

Entry nameQ6S3H8_TORMA
AccessionPrimary (citable) accession number: Q6S3H8
Entry history
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: March 6, 2013
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info