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Protein
Submitted name:

TATA box binding protein, isoform CRA_a

Gene

Tbp

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
TATA box binding protein, isoform CRA_aImported
Submitted name:
TATA-binding proteinImported
Gene namesi
Name:TbpImported
ORF Names:mCG_4503Imported
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:101838. Tbp.

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Proteomic databases

MaxQBiQ6RI65.

Expressioni

Gene expression databases

BgeeiENSMUSG00000014767.

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000014911.

Structurei

3D structure databases

SMRiQ6RI65.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili49 – 72Sequence analysisAdd BLAST24

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG3302. Eukaryota.
COG2101. LUCA.
HOGENOMiHOG000105164.
HOVERGENiHBG044997.
KOiK03120.
OMAiMMPYGSG.
OrthoDBiEOG091G0ENY.

Family and domain databases

CDDicd04516. TBP_eukaryotes. 1 hit.
HAMAPiMF_00408. TATA_bind_prot_arch. 1 hit.
InterProiView protein in InterPro
IPR000814. TBP.
IPR030491. TBP_CS.
IPR033710. TBP_eukaryotic.
PANTHERiPTHR10126. PTHR10126. 1 hit.
PfamiView protein in Pfam
PF00352. TBP. 2 hits.
PRINTSiPR00686. TIFACTORIID.
PROSITEiView protein in PROSITE
PS00351. TFIID. 1 hit.

Sequencei

Sequence statusi: Complete.

Q6RI65-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDQNNSLPPY AQGLASPQGA MTPGIPIFSP MMPYGTGLTP QPIQNTNSLS
60 70 80 90 100
ILEEQQRQQQ QQQQQQQQQQ AVATAAASVQ QSTSQQPTQG ASGQTPQLFH
110 120 130 140 150
SQTLTTAPLP GTTPLYPSPM TPMTPITPAT PASESSGIVP QLQNIVSTVN
160 170 180 190 200
LGCKLDLKTI ALRARNAEYN PKRFAAVIMR IREPRTTALI FSSGKMVCTG
210 220 230 240 250
AKSEEQSRLA ARKYARVVQK LGFPAKFLDF KIQNMVGSCD VKFPIRLEGL
260 270 280 290 300
VLTHQQFSSY EPELFPGLIY RMIKPRIVLL IFVSGKVVLT GAKVRAEIYE
310
AFENIYPILK GFRKTT
Length:316
Mass (Da):34,709
Last modified:May 10, 2005 - v1
Checksum:iA33D776160B4A393
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY497019 Genomic DNA. Translation: AAR30866.1.
CH466630 Genomic DNA. Translation: EDL20459.1.
CH466630 Genomic DNA. Translation: EDL20461.1.
RefSeqiNP_038712.3. NM_013684.3.
UniGeneiMm.244820.

Genome annotation databases

GeneIDi21374.
KEGGimmu:21374.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY497019 Genomic DNA. Translation: AAR30866.1.
CH466630 Genomic DNA. Translation: EDL20459.1.
CH466630 Genomic DNA. Translation: EDL20461.1.
RefSeqiNP_038712.3. NM_013684.3.
UniGeneiMm.244820.

3D structure databases

SMRiQ6RI65.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000014911.

Proteomic databases

MaxQBiQ6RI65.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi21374.
KEGGimmu:21374.

Organism-specific databases

CTDi6908.
MGIiMGI:101838. Tbp.

Phylogenomic databases

eggNOGiKOG3302. Eukaryota.
COG2101. LUCA.
HOGENOMiHOG000105164.
HOVERGENiHBG044997.
KOiK03120.
OMAiMMPYGSG.
OrthoDBiEOG091G0ENY.

Miscellaneous databases

SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000014767.

Family and domain databases

CDDicd04516. TBP_eukaryotes. 1 hit.
HAMAPiMF_00408. TATA_bind_prot_arch. 1 hit.
InterProiView protein in InterPro
IPR000814. TBP.
IPR030491. TBP_CS.
IPR033710. TBP_eukaryotic.
PANTHERiPTHR10126. PTHR10126. 1 hit.
PfamiView protein in Pfam
PF00352. TBP. 2 hits.
PRINTSiPR00686. TIFACTORIID.
PROSITEiView protein in PROSITE
PS00351. TFIID. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ6RI65_MOUSE
AccessioniPrimary (citable) accession number: Q6RI65
Entry historyiIntegrated into UniProtKB/TrEMBL: May 10, 2005
Last sequence update: May 10, 2005
Last modified: June 7, 2017
This is version 107 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.