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Q6RFL5 (BSH_CHICK) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 75. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Web links·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Brain-specific homeobox protein homolog
Gene names
Name:BSX
OrganismGallus gallus (Chicken) [Reference proteome]
Taxonomic identifier9031 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiTestudines + Archosauria groupArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaeGalliformesPhasianidaePhasianinaeGallus

Protein attributes

Sequence length233 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Function

DNA binding protein that function as transcriptional activator By similarity. May play a role in the determination and function of cell types in the brain By similarity.

Subcellular location

Nucleus By similarity UniProtKB Q04787.

Sequence similarities

Belongs to the distal-less homeobox family.

Contains 1 homeobox DNA-binding domain.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 233233Brain-specific homeobox protein homolog
PRO_0000048843

Regions

DNA binding110 – 17061Homeobox
Compositional bias68 – 10942His-rich

Sequences

Sequence LengthMass (Da)Tools
Q6RFL5 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: 7CF5E9DA4953AB6C

FASTA23326,452
        10         20         30         40         50         60 
MNLNFTSPVH PVPAPRPTSF FIEDILLHKP KPLREVPPEH FAGSLASRVP LLDYGYPLMP 

        70         80         90        100        110        120 
APALLAPHPH PALHKPEHHH HHPYFLTTSG VPVPALFPHH AHAELPGKHC RRRKARTVFS 

       130        140        150        160        170        180 
DSQLSGLEKR FEIQRYLSTP ERVELATALS LSETQVKTWF QNRRMKHKKQ LRKSQDDPIH 

       190        200        210        220        230 
EENREQSSPE PELPEPAAAE PRKGPPGPFL LQDPEDEVDI LEEGDILAAP HRL 

« Hide

References

[1]"Identification of vertebrate homologs of the Drosophila brain-specific homeobox gene."
Assimacopoulos S., Ragsdale C.W.
Submitted (DEC-2003) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [MRNA].
Tissue: Forebrain.

Web resources

Protein Spotlight

Of fidgets and food - Issue 85 of August 2007

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AY500594 mRNA. Translation: AAR89086.1.
RefSeqNP_989843.1. NM_204512.1.
UniGeneGga.9478.

3D structure databases

ProteinModelPortalQ6RFL5.
SMRQ6RFL5. Positions 106-169.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING9031.ENSGALP00000010513.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSGALT00000010527; ENSGALP00000010513; ENSGALG00000006515.
GeneID395183.
KEGGgga:395183.

Organism-specific databases

CTD390259.

Phylogenomic databases

eggNOGNOG242366.
GeneTreeENSGT00740000114906.
HOGENOMHOG000231924.
HOVERGENHBG050738.
InParanoidQ6RFL5.
OMALHKPEHH.
OrthoDBEOG7QVM51.
PhylomeDBQ6RFL5.
TreeFamTF350735.

Family and domain databases

Gene3D1.10.10.60. 1 hit.
InterProIPR017970. Homeobox_CS.
IPR001356. Homeobox_dom.
IPR020479. Homeobox_metazoa.
IPR009057. Homeodomain-like.
[Graphical view]
PfamPF00046. Homeobox. 1 hit.
[Graphical view]
PRINTSPR00024. HOMEOBOX.
SMARTSM00389. HOX. 1 hit.
[Graphical view]
SUPFAMSSF46689. SSF46689. 1 hit.
PROSITEPS00027. HOMEOBOX_1. 1 hit.
PS50071. HOMEOBOX_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio20815273.
PROQ6RFL5.

Entry information

Entry nameBSH_CHICK
AccessionPrimary (citable) accession number: Q6RFL5
Entry history
Integrated into UniProtKB/Swiss-Prot: August 31, 2004
Last sequence update: July 5, 2004
Last modified: April 16, 2014
This is version 75 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Protein Spotlight

Protein Spotlight articles and cited UniProtKB/Swiss-Prot entries